RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 LOC101927531A0A1B0GV80 90 aa6.74□□□□□ -1.33
UBE2D3-221ENST00000507845 ATOX1O00244 68 aa6.74□□□□□ -1.33
UBE2D3-221ENST00000507845 CYP4F30PQ9H0H9 118 aa6.73□□□□□ -1.33
UBE2D3-221ENST00000507845 C5orf47Q569G3 176 aa6.7□□□□□ -1.34
UBE2D3-221ENST00000507845 MP68P56378 58 aa6.69□□□□□ -1.34
UBE2D3-221ENST00000507845 C4orf26Q17RF5 130 aa6.69□□□□□ -1.34
UBE2D3-221ENST00000507845 C1orf64Q8NEQ6 169 aa6.69□□□□□ -1.34
UBE2D3-221ENST00000507845 LINC00208Q96KT6 92 aa6.69□□□□□ -1.34
UBE2D3-221ENST00000507845 SMIM20Q8N5G0 67 aa6.68□□□□□ -1.34
UBE2D3-221ENST00000507845 TRAV7A0A075B6U4 112 aa6.67□□□□□ -1.34
UBE2D3-221ENST00000507845 H3BPC8 53 aa6.65□□□□□ -1.34
UBE2D3-221ENST00000507845 M0R2T5 61 aa6.64□□□□□ -1.35
UBE2D3-221ENST00000507845 KRTAP15-1Q3LI76 137 aa6.63□□□□□ -1.35
UBE2D3-221ENST00000507845 H1FX-AS1Q4G0G2 97 aa6.63□□□□□ -1.35
UBE2D3-221ENST00000507845 KRTAP5-3Q6L8H2 238 aa6.62□□□□□ -1.35
UBE2D3-221ENST00000507845 KLKP1Q107X0 134 aa6.61□□□□□ -1.35
UBE2D3-221ENST00000507845 KRTAP10-6P60371 365 aaPredicted RBP6.58□□□□□ -1.36
UBE2D3-221ENST00000507845 SERP2Q8N6R1 65 aa6.57□□□□□ -1.36
UBE2D3-221ENST00000507845 SNURFQ9Y675 71 aa6.5□□□□□ -1.37
UBE2D3-221ENST00000507845 C20orf197Q8N268 126 aa6.49□□□□□ -1.37
UBE2D3-221ENST00000507845 S4R3F8 94 aa6.49□□□□□ -1.37
UBE2D3-221ENST00000507845 A8MUN3 132 aa6.47□□□□□ -1.37
UBE2D3-221ENST00000507845 COX7CP15954 63 aa6.47□□□□□ -1.37
UBE2D3-221ENST00000507845 KRTAP9-8Q9BYQ0 159 aa6.46□□□□□ -1.38
UBE2D3-221ENST00000507845 LCA10Q71F78 164 aa6.45□□□□□ -1.38
UBE2D3-221ENST00000507845 DMAC1Q96GE9 116 aa6.43□□□□□ -1.38
UBE2D3-221ENST00000507845 ANAPC13Q9BS18 74 aa6.42□□□□□ -1.38
UBE2D3-221ENST00000507845 MT2AP02795 61 aa6.41□□□□□ -1.38
UBE2D3-221ENST00000507845 CSAG1Q6PB30 78 aa6.39□□□□□ -1.39
UBE2D3-221ENST00000507845 MT1FP04733 61 aa6.36□□□□□ -1.39
UBE2D3-221ENST00000507845 SPANXA2-OT1Q8N9U9 137 aa6.36□□□□□ -1.39
UBE2D3-221ENST00000507845 NDUFC1O43677 76 aa6.34□□□□□ -1.39
UBE2D3-221ENST00000507845 CYSTM1Q9H1C7 97 aa6.34□□□□□ -1.39
UBE2D3-221ENST00000507845 ACYP2P14621 99 aa6.32□□□□□ -1.4
UBE2D3-221ENST00000507845 KRTAP10-10P60014 251 aa6.32□□□□□ -1.4
UBE2D3-221ENST00000507845 CCDC179H3BU77 68 aa6.3□□□□□ -1.4
UBE2D3-221ENST00000507845 H7BZZ5 65 aa6.3□□□□□ -1.4
UBE2D3-221ENST00000507845 H0YAA0 97 aa6.2□□□□□ -1.42
UBE2D3-221ENST00000507845 CHKB-CPT1BH3BT56 60 aa6.2□□□□□ -1.42
UBE2D3-221ENST00000507845 COA5Q86WW8 74 aa6.17□□□□□ -1.42
UBE2D3-221ENST00000507845 SPTSSBQ8NFR3 76 aa6.17□□□□□ -1.42
UBE2D3-221ENST00000507845 ADM2Q7Z4H4 148 aa6.14□□□□□ -1.43
UBE2D3-221ENST00000507845 USH2AO75445 5202 aa6.1□□□□□ -1.43
UBE2D3-221ENST00000507845 ATP5EP56381 51 aaPredicted RBP6.09□□□□□ -1.43
UBE2D3-221ENST00000507845 P0C880 135 aa6.07□□□□□ -1.44
UBE2D3-221ENST00000507845 TMEM258P61165 79 aa6.07□□□□□ -1.44
UBE2D3-221ENST00000507845 CRIPTQ9P021 101 aa6.07□□□□□ -1.44
UBE2D3-221ENST00000507845 SPRR2GQ9BYE4 73 aa6.06□□□□□ -1.44
UBE2D3-221ENST00000507845 FSIP2Q5CZC0 6907 aa6.06□□□□□ -1.44
UBE2D3-221ENST00000507845 CRCT1Q9UGL9 99 aa6□□□□□ -1.45
UBE2D3-221ENST00000507845 KRTAP19-8Q3LI54 63 aa5.98□□□□□ -1.45
UBE2D3-221ENST00000507845 PCP4P48539 62 aa5.97□□□□□ -1.45
UBE2D3-221ENST00000507845 SSPOA2VEC9 5147 aa5.96□□□□□ -1.45
UBE2D3-221ENST00000507845 R4GN34 69 aa5.95□□□□□ -1.46
UBE2D3-221ENST00000507845 M0QZ58 72 aa5.93□□□□□ -1.46
UBE2D3-221ENST00000507845 MT1BP07438 61 aa5.93□□□□□ -1.46
UBE2D3-221ENST00000507845 Q5VV11 94 aa5.92□□□□□ -1.46
UBE2D3-221ENST00000507845 SEC61GP60059 68 aa5.89□□□□□ -1.47
UBE2D3-221ENST00000507845 SERP1Q9Y6X1 66 aa5.88□□□□□ -1.47
UBE2D3-221ENST00000507845 KRTAP19-6Q3LI70 58 aa5.86□□□□□ -1.47
UBE2D3-221ENST00000507845 A0A1B0GU69 56 aa5.82□□□□□ -1.48
UBE2D3-221ENST00000507845 KRTAP13-4Q3LI77 160 aa5.82□□□□□ -1.48
UBE2D3-221ENST00000507845 LINC01554Q52M75 96 aa5.82□□□□□ -1.48
UBE2D3-221ENST00000507845 FCGBPQ9Y6R7 5405 aaPredicted RBP5.79□□□□□ -1.48
UBE2D3-221ENST00000507845 LINC01558Q9Y6Z2 57 aa5.79□□□□□ -1.48
UBE2D3-221ENST00000507845 A0A1B0GU33 70 aa5.78□□□□□ -1.48
UBE2D3-221ENST00000507845 LCE1AQ5T7P2 110 aa5.76□□□□□ -1.49
UBE2D3-221ENST00000507845 PLAC4Q8WY50 150 aa5.75□□□□□ -1.49
UBE2D3-221ENST00000507845 PRR15LQ9BU68 103 aa5.74□□□□□ -1.49
UBE2D3-221ENST00000507845 KRTAP10-5P60370 271 aa5.72□□□□□ -1.49
UBE2D3-221ENST00000507845 SPATA8Q6RVD6 105 aa5.72□□□□□ -1.49
UBE2D3-221ENST00000507845 A6NN06 94 aa5.71□□□□□ -1.5
UBE2D3-221ENST00000507845 RPS28P62857 69 aaKnown RBP5.68□□□□□ -1.5
UBE2D3-221ENST00000507845 SMIM26A0A096LP01 95 aa5.66□□□□□ -1.5
UBE2D3-221ENST00000507845 A0A0D9SG42 100 aa5.65□□□□□ -1.5
UBE2D3-221ENST00000507845 Q1T7F1 81 aa5.65□□□□□ -1.5
UBE2D3-221ENST00000507845 V9GYY9 64 aa5.65□□□□□ -1.5
UBE2D3-221ENST00000507845 MT1XP80297 61 aa5.64□□□□□ -1.51
UBE2D3-221ENST00000507845 PRO2289Q9P1D8 64 aa5.61□□□□□ -1.51
UBE2D3-221ENST00000507845 A8MU10 97 aa5.58□□□□□ -1.52
UBE2D3-221ENST00000507845 PSPHP1O15172 72 aa5.58□□□□□ -1.52
UBE2D3-221ENST00000507845 UQCR11O14957 56 aa5.57□□□□□ -1.52
UBE2D3-221ENST00000507845 KRTAP12-1P59990 96 aa5.57□□□□□ -1.52
UBE2D3-221ENST00000507845 SPINT4Q6UDR6 99 aa5.54□□□□□ -1.52
UBE2D3-221ENST00000507845 KRTAP12-2P59991 146 aa5.53□□□□□ -1.52
UBE2D3-221ENST00000507845 MACF1Q9UPN3 7388 aaKnown RBP5.53□□□□□ -1.52
UBE2D3-221ENST00000507845 CAMK2N1Q7Z7J9 78 aa5.52□□□□□ -1.53
UBE2D3-221ENST00000507845 MIR22HGQ0VDD5 57 aa5.48□□□□□ -1.53
UBE2D3-221ENST00000507845 SYNE2Q8WXH0 6885 aaKnown RBP5.42□□□□□ -1.54
UBE2D3-221ENST00000507845 A6NED7 52 aa5.4□□□□□ -1.54
UBE2D3-221ENST00000507845 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
UBE2D3-221ENST00000507845 KRTAP2-2Q9BYT5 123 aa5.39□□□□□ -1.55
UBE2D3-221ENST00000507845 KRTAP10-12P60413 245 aa5.36□□□□□ -1.55
UBE2D3-221ENST00000507845 SVIPQ8NHG7 77 aa5.35□□□□□ -1.55
UBE2D3-221ENST00000507845 KRTAP6-3Q3LI67 103 aa5.33□□□□□ -1.56
UBE2D3-221ENST00000507845 KMT2DO14686 5537 aa5.32□□□□□ -1.56
UBE2D3-221ENST00000507845 K7ERS5 55 aa5.29□□□□□ -1.56
UBE2D3-221ENST00000507845 C10orf95Q9H7T3 257 aa5.29□□□□□ -1.56
UBE2D3-221ENST00000507845 KRTAP8-1Q8IUC2 63 aa5.25□□□□□ -1.57
UBE2D3-221ENST00000507845 CDC42SE1Q9NRR8 79 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms