RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 SMIM20Q8N5G0 67 aa9.34□□□□□ -0.91
SNX25-204ENST00000506896 A8MUN3 132 aa9.33□□□□□ -0.92
SNX25-204ENST00000506896 FAM236AA0A1B0GUQ0 79 aa9.32□□□□□ -0.92
SNX25-204ENST00000506896 FAM236BA0A1B0GV22 79 aa9.32□□□□□ -0.92
SNX25-204ENST00000506896 TRAV7A0A075B6U4 112 aa9.27□□□□□ -0.93
SNX25-204ENST00000506896 KRTAP3-3Q9BYR6 98 aa9.25□□□□□ -0.93
SNX25-204ENST00000506896 FCGBPQ9Y6R7 5405 aaPredicted RBP9.22□□□□□ -0.93
SNX25-204ENST00000506896 KRTAP19-1Q8IUB9 90 aa9.21□□□□□ -0.94
SNX25-204ENST00000506896 NDUFC1O43677 76 aa9.2□□□□□ -0.94
SNX25-204ENST00000506896 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.16□□□□□ -0.94
SNX25-204ENST00000506896 DMAC1Q96GE9 116 aa9.14□□□□□ -0.95
SNX25-204ENST00000506896 KRTAP19-6Q3LI70 58 aa9.08□□□□□ -0.96
SNX25-204ENST00000506896 SERP2Q8N6R1 65 aa9.06□□□□□ -0.96
SNX25-204ENST00000506896 H0YAA0 97 aa9.05□□□□□ -0.96
SNX25-204ENST00000506896 KRTAP9-7A8MTY7 169 aa9.03□□□□□ -0.96
SNX25-204ENST00000506896 SNURFQ9Y675 71 aa9.01□□□□□ -0.97
SNX25-204ENST00000506896 ACYP2P14621 99 aa8.99□□□□□ -0.97
SNX25-204ENST00000506896 CRIPTQ9P021 101 aa8.99□□□□□ -0.97
SNX25-204ENST00000506896 C20orf197Q8N268 126 aa8.98□□□□□ -0.97
SNX25-204ENST00000506896 SPRR2GQ9BYE4 73 aa8.98□□□□□ -0.97
SNX25-204ENST00000506896 ADM2Q7Z4H4 148 aa8.92□□□□□ -0.98
SNX25-204ENST00000506896 SPANXA2-OT1Q8N9U9 137 aa8.91□□□□□ -0.98
SNX25-204ENST00000506896 MACF1Q9UPN3 7388 aaKnown RBP8.89□□□□□ -0.99
SNX25-204ENST00000506896 COX7CP15954 63 aa8.86□□□□□ -0.99
SNX25-204ENST00000506896 KRTAP19-8Q3LI54 63 aa8.86□□□□□ -0.99
SNX25-204ENST00000506896 Q5VV11 94 aa8.86□□□□□ -0.99
SNX25-204ENST00000506896 SPTSSBQ8NFR3 76 aa8.86□□□□□ -0.99
SNX25-204ENST00000506896 CHKB-CPT1BH3BT56 60 aa8.82□□□□□ -1
SNX25-204ENST00000506896 MT1BP07438 61 aa8.79□□□□□ -1
SNX25-204ENST00000506896 SYNE2Q8WXH0 6885 aaKnown RBP8.77□□□□□ -1.01
SNX25-204ENST00000506896 P0C880 135 aa8.73□□□□□ -1.01
SNX25-204ENST00000506896 ANAPC13Q9BS18 74 aa8.7□□□□□ -1.02
SNX25-204ENST00000506896 KRTAP3-2Q9BYR7 98 aa8.7□□□□□ -1.02
SNX25-204ENST00000506896 R4GN34 69 aa8.7□□□□□ -1.02
SNX25-204ENST00000506896 H7BZZ5 65 aa8.65□□□□□ -1.02
SNX25-204ENST00000506896 A6NN06 94 aa8.62□□□□□ -1.03
SNX25-204ENST00000506896 M0QZ58 72 aa8.62□□□□□ -1.03
SNX25-204ENST00000506896 CYSTM1Q9H1C7 97 aa8.61□□□□□ -1.03
SNX25-204ENST00000506896 KRTAP6-3Q3LI67 103 aa8.6□□□□□ -1.03
SNX25-204ENST00000506896 COA5Q86WW8 74 aa8.6□□□□□ -1.03
SNX25-204ENST00000506896 KRTAP10-5P60370 271 aa8.57□□□□□ -1.04
SNX25-204ENST00000506896 PLAC4Q8WY50 150 aa8.51□□□□□ -1.05
SNX25-204ENST00000506896 CCDC179H3BU77 68 aa8.48□□□□□ -1.05
SNX25-204ENST00000506896 LINC01554Q52M75 96 aa8.46□□□□□ -1.06
SNX25-204ENST00000506896 SEC61GP60059 68 aa8.41□□□□□ -1.06
SNX25-204ENST00000506896 PRO2289Q9P1D8 64 aa8.41□□□□□ -1.06
SNX25-204ENST00000506896 ATP5EP56381 51 aaPredicted RBP8.38□□□□□ -1.07
SNX25-204ENST00000506896 SERP1Q9Y6X1 66 aa8.37□□□□□ -1.07
SNX25-204ENST00000506896 MT1XP80297 61 aa8.32□□□□□ -1.08
SNX25-204ENST00000506896 MUC12Q9UKN1 5478 aa8.3□□□□□ -1.08
SNX25-204ENST00000506896 KRTAP13-4Q3LI77 160 aa8.26□□□□□ -1.09
SNX25-204ENST00000506896 TMEM258P61165 79 aa8.24□□□□□ -1.09
SNX25-204ENST00000506896 KRTAP5-9P26371 169 aa8.23□□□□□ -1.09
SNX25-204ENST00000506896 NEBP20929 6669 aa8.21□□□□□ -1.09
SNX25-204ENST00000506896 A0A1B0GU33 70 aa8.2□□□□□ -1.1
SNX25-204ENST00000506896 A0A1B0GU69 56 aa8.19□□□□□ -1.1
SNX25-204ENST00000506896 KMT2DO14686 5537 aa8.15□□□□□ -1.11
SNX25-204ENST00000506896 KRTAP12-2P59991 146 aa8.11□□□□□ -1.11
SNX25-204ENST00000506896 SPATA8Q6RVD6 105 aa8.09□□□□□ -1.11
SNX25-204ENST00000506896 MDN1Q9NU22 5596 aa8.07□□□□□ -1.12
SNX25-204ENST00000506896 PRR15LQ9BU68 103 aa8.07□□□□□ -1.12
SNX25-204ENST00000506896 A0A0D9SG42 100 aa8.06□□□□□ -1.12
SNX25-204ENST00000506896 CAMK2N1Q7Z7J9 78 aa8.04□□□□□ -1.12
SNX25-204ENST00000506896 LINC01558Q9Y6Z2 57 aa8.01□□□□□ -1.13
SNX25-204ENST00000506896 SMIM26A0A096LP01 95 aa7.99□□□□□ -1.13
SNX25-204ENST00000506896 SPINT4Q6UDR6 99 aa7.94□□□□□ -1.14
SNX25-204ENST00000506896 SPRR2FQ96RM1 72 aa7.94□□□□□ -1.14
SNX25-204ENST00000506896 KRTAP10-7P60409 375 aaPredicted RBP7.93□□□□□ -1.14
SNX25-204ENST00000506896 KRTAP10-12P60413 245 aa7.93□□□□□ -1.14
SNX25-204ENST00000506896 KRTAP8-1Q8IUC2 63 aa7.92□□□□□ -1.14
SNX25-204ENST00000506896 KRTAP12-1P59990 96 aa7.91□□□□□ -1.14
SNX25-204ENST00000506896 KRTAP20-1Q3LI63 56 aa7.9□□□□□ -1.14
SNX25-204ENST00000506896 KRTAP4-8A0A0G2JLE6 195 aa7.87□□□□□ -1.15
SNX25-204ENST00000506896 KRTAP4-8Q9BYQ9 185 aa7.87□□□□□ -1.15
SNX25-204ENST00000506896 A8MU10 97 aa7.85□□□□□ -1.15
SNX25-204ENST00000506896 SPRR2EP22531 72 aa7.81□□□□□ -1.16
SNX25-204ENST00000506896 SPRR2BP35325 72 aa7.81□□□□□ -1.16
SNX25-204ENST00000506896 SPRR2AP35326 72 aa7.81□□□□□ -1.16
SNX25-204ENST00000506896 UQCR11O14957 56 aa7.79□□□□□ -1.16
SNX25-204ENST00000506896 V9GYY9 64 aa7.78□□□□□ -1.16
SNX25-204ENST00000506896 LCE1AQ5T7P2 110 aa7.76□□□□□ -1.17
SNX25-204ENST00000506896 KRTAP2-3P0C7H8 128 aa7.75□□□□□ -1.17
SNX25-204ENST00000506896 KRTAP2-4Q9BYR9 128 aa7.75□□□□□ -1.17
SNX25-204ENST00000506896 PCP4P48539 62 aa7.72□□□□□ -1.17
SNX25-204ENST00000506896 Q1T7F1 81 aa7.7□□□□□ -1.18
SNX25-204ENST00000506896 PSPHP1O15172 72 aa7.61□□□□□ -1.19
SNX25-204ENST00000506896 MIR22HGQ0VDD5 57 aa7.61□□□□□ -1.19
SNX25-204ENST00000506896 RPS28P62857 69 aaKnown RBP7.58□□□□□ -1.2
SNX25-204ENST00000506896 SPRR2DP22532 72 aa7.54□□□□□ -1.2
SNX25-204ENST00000506896 C10orf95Q9H7T3 257 aa7.53□□□□□ -1.2
SNX25-204ENST00000506896 TNP1P09430 55 aa7.51□□□□□ -1.21
SNX25-204ENST00000506896 KRTAP2-2Q9BYT5 123 aa7.5□□□□□ -1.21
SNX25-204ENST00000506896 KRTAP2-1Q9BYU5 128 aa7.5□□□□□ -1.21
SNX25-204ENST00000506896 K7ERS5 55 aa7.47□□□□□ -1.21
SNX25-204ENST00000506896 KRTAP19-7Q3SYF9 63 aa7.43□□□□□ -1.22
SNX25-204ENST00000506896 A6NED7 52 aa7.4□□□□□ -1.22
SNX25-204ENST00000506896 MT1EP04732 61 aa7.37□□□□□ -1.23
SNX25-204ENST00000506896 LCE3BQ5TA77 95 aa7.36□□□□□ -1.23
SNX25-204ENST00000506896 KRTAP19-5Q3LI72 72 aa7.32□□□□□ -1.24
SNX25-204ENST00000506896 LCE3AQ5TA76 89 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms