RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 COX6B2Q6YFQ2 88 aa4.76□□□□□ -1.65
TPM3-218ENST00000505010 DMAC1Q96GE9 116 aa4.76□□□□□ -1.65
TPM3-218ENST00000505010 RBM12B-AS1Q9P1G2 102 aa4.75□□□□□ -1.65
TPM3-218ENST00000505010 A8MUN3 132 aa4.73□□□□□ -1.65
TPM3-218ENST00000505010 MT1HP80294 61 aa4.73□□□□□ -1.65
TPM3-218ENST00000505010 MPLKIPQ8TAP9 179 aa4.73□□□□□ -1.65
TPM3-218ENST00000505010 LORP23490 312 aaPredicted RBP4.72□□□□□ -1.65
TPM3-218ENST00000505010 ACYP2P14621 99 aa4.71□□□□□ -1.66
TPM3-218ENST00000505010 KRTAP3-1Q9BYR8 98 aa4.71□□□□□ -1.66
TPM3-218ENST00000505010 KRTAP10-6P60371 365 aaPredicted RBP4.7□□□□□ -1.66
TPM3-218ENST00000505010 COA5Q86WW8 74 aa4.69□□□□□ -1.66
TPM3-218ENST00000505010 USH2AO75445 5202 aa4.69□□□□□ -1.66
TPM3-218ENST00000505010 CHKB-CPT1BH3BT56 60 aa4.68□□□□□ -1.66
TPM3-218ENST00000505010 KRTAP19-2Q3LHN2 52 aa4.68□□□□□ -1.66
TPM3-218ENST00000505010 SERP1Q9Y6X1 66 aa4.68□□□□□ -1.66
TPM3-218ENST00000505010 H1FX-AS1Q4G0G2 97 aa4.67□□□□□ -1.66
TPM3-218ENST00000505010 SSPOA2VEC9 5147 aa4.67□□□□□ -1.66
TPM3-218ENST00000505010 M0R2T5 61 aa4.66□□□□□ -1.66
TPM3-218ENST00000505010 SYNE2Q8WXH0 6885 aaKnown RBP4.65□□□□□ -1.66
TPM3-218ENST00000505010 S4R3F8 94 aa4.65□□□□□ -1.67
TPM3-218ENST00000505010 LCA10Q71F78 164 aa4.61□□□□□ -1.67
TPM3-218ENST00000505010 FCGBPQ9Y6R7 5405 aaPredicted RBP4.61□□□□□ -1.67
TPM3-218ENST00000505010 FLGP20930 4061 aaPredicted RBP4.61□□□□□ -1.67
TPM3-218ENST00000505010 MACF1Q9UPN3 7388 aaKnown RBP4.6□□□□□ -1.67
TPM3-218ENST00000505010 RPS28P62857 69 aaKnown RBP4.59□□□□□ -1.67
TPM3-218ENST00000505010 SPTSSBQ8NFR3 76 aa4.58□□□□□ -1.68
TPM3-218ENST00000505010 SMIM26A0A096LP01 95 aa4.54□□□□□ -1.68
TPM3-218ENST00000505010 CSAG1Q6PB30 78 aa4.53□□□□□ -1.68
TPM3-218ENST00000505010 LOC100996750A0A140TA64 210 aa4.47□□□□□ -1.69
TPM3-218ENST00000505010 H3BS24 57 aa4.47□□□□□ -1.69
TPM3-218ENST00000505010 KRTAP4-6Q9BYQ5 205 aa4.47□□□□□ -1.69
TPM3-218ENST00000505010 V9GYY9 64 aa4.47□□□□□ -1.69
TPM3-218ENST00000505010 Q1T7F1 81 aa4.46□□□□□ -1.7
TPM3-218ENST00000505010 LINC01558Q9Y6Z2 57 aa4.46□□□□□ -1.7
TPM3-218ENST00000505010 KRTAP19-1Q8IUB9 90 aa4.45□□□□□ -1.7
TPM3-218ENST00000505010 PRR15LQ9BU68 103 aa4.45□□□□□ -1.7
TPM3-218ENST00000505010 A0A1B0GU69 56 aa4.44□□□□□ -1.7
TPM3-218ENST00000505010 SEC61GP60059 68 aa4.44□□□□□ -1.7
TPM3-218ENST00000505010 PSPHP1O15172 72 aa4.42□□□□□ -1.7
TPM3-218ENST00000505010 ADM2Q7Z4H4 148 aa4.42□□□□□ -1.7
TPM3-218ENST00000505010 KRTAP9-8Q9BYQ0 159 aa4.41□□□□□ -1.7
TPM3-218ENST00000505010 H0YAA0 97 aa4.39□□□□□ -1.71
TPM3-218ENST00000505010 NEBP20929 6669 aa4.37□□□□□ -1.71
TPM3-218ENST00000505010 P0C880 135 aa4.37□□□□□ -1.71
TPM3-218ENST00000505010 Q5VV11 94 aa4.36□□□□□ -1.71
TPM3-218ENST00000505010 KRTAP6-3Q3LI67 103 aa4.33□□□□□ -1.72
TPM3-218ENST00000505010 A0A1B0GU33 70 aa4.31□□□□□ -1.72
TPM3-218ENST00000505010 MT2AP02795 61 aa4.31□□□□□ -1.72
TPM3-218ENST00000505010 SVIPQ8NHG7 77 aa4.3□□□□□ -1.72
TPM3-218ENST00000505010 MUC12Q9UKN1 5478 aa4.29□□□□□ -1.72
TPM3-218ENST00000505010 A6NED7 52 aa4.29□□□□□ -1.72
TPM3-218ENST00000505010 MT1FP04733 61 aa4.28□□□□□ -1.72
TPM3-218ENST00000505010 KRTAP10-10P60014 251 aa4.28□□□□□ -1.72
TPM3-218ENST00000505010 KRTAP9-3Q9BYQ3 159 aa4.28□□□□□ -1.72
TPM3-218ENST00000505010 M0QZ58 72 aa4.27□□□□□ -1.73
TPM3-218ENST00000505010 UQCR11O14957 56 aa4.27□□□□□ -1.73
TPM3-218ENST00000505010 KRTAP19-6Q3LI70 58 aa4.27□□□□□ -1.73
TPM3-218ENST00000505010 SPATA8Q6RVD6 105 aa4.26□□□□□ -1.73
TPM3-218ENST00000505010 R4GN34 69 aa4.26□□□□□ -1.73
TPM3-218ENST00000505010 KRTAP13-4Q3LI77 160 aa4.25□□□□□ -1.73
TPM3-218ENST00000505010 CRIPTQ9P021 101 aa4.25□□□□□ -1.73
TPM3-218ENST00000505010 MIR22HGQ0VDD5 57 aa4.24□□□□□ -1.73
TPM3-218ENST00000505010 A0A0D9SG42 100 aa4.2□□□□□ -1.74
TPM3-218ENST00000505010 KRTAP20-1Q3LI63 56 aa4.2□□□□□ -1.74
TPM3-218ENST00000505010 LINC01554Q52M75 96 aa4.2□□□□□ -1.74
TPM3-218ENST00000505010 A8MU10 97 aa4.19□□□□□ -1.74
TPM3-218ENST00000505010 BRK1Q8WUW1 75 aa4.19□□□□□ -1.74
TPM3-218ENST00000505010 CDC42SE1Q9NRR8 79 aa4.18□□□□□ -1.74
TPM3-218ENST00000505010 SPRR2GQ9BYE4 73 aa4.16□□□□□ -1.74
TPM3-218ENST00000505010 KRTAP4-8Q9BYQ9 185 aa4.12□□□□□ -1.75
TPM3-218ENST00000505010 MDN1Q9NU22 5596 aa4.1□□□□□ -1.75
TPM3-218ENST00000505010 SPINT4Q6UDR6 99 aa4.1□□□□□ -1.75
TPM3-218ENST00000505010 KRTAP12-1P59990 96 aa4.08□□□□□ -1.76
TPM3-218ENST00000505010 KRTAP12-2P59991 146 aa4.08□□□□□ -1.76
TPM3-218ENST00000505010 A6NN06 94 aa4.07□□□□□ -1.76
TPM3-218ENST00000505010 K7ERS5 55 aa4.07□□□□□ -1.76
TPM3-218ENST00000505010 KRTAP19-8Q3LI54 63 aa4.07□□□□□ -1.76
TPM3-218ENST00000505010 KMT2DO14686 5537 aa4.05□□□□□ -1.76
TPM3-218ENST00000505010 PLAC4Q8WY50 150 aa4.04□□□□□ -1.76
TPM3-218ENST00000505010 MT1BP07438 61 aa4.02□□□□□ -1.77
TPM3-218ENST00000505010 PRO0628Q9UI54 55 aa4.02□□□□□ -1.77
TPM3-218ENST00000505010 KRTAP2-3P0C7H8 128 aa4□□□□□ -1.77
TPM3-218ENST00000505010 CAMK2N1Q7Z7J9 78 aa4□□□□□ -1.77
TPM3-218ENST00000505010 KRTAP2-4Q9BYR9 128 aa4□□□□□ -1.77
TPM3-218ENST00000505010 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
TPM3-218ENST00000505010 KRTAP4-12Q9BQ66 201 aa3.95□□□□□ -1.78
TPM3-218ENST00000505010 PMAIP1Q13794 54 aa3.94□□□□□ -1.78
TPM3-218ENST00000505010 LCE3BQ5TA77 95 aa3.94□□□□□ -1.78
TPM3-218ENST00000505010 ROMO1P60602 79 aa3.88□□□□□ -1.79
TPM3-218ENST00000505010 MT1XP80297 61 aa3.88□□□□□ -1.79
TPM3-218ENST00000505010 C10orf95Q9H7T3 257 aa3.87□□□□□ -1.79
TPM3-218ENST00000505010 PRO2289Q9P1D8 64 aa3.87□□□□□ -1.79
TPM3-218ENST00000505010 KRTAP10-5P60370 271 aa3.86□□□□□ -1.79
TPM3-218ENST00000505010 KRTAP9-9Q9BYP9 154 aa3.85□□□□□ -1.79
TPM3-218ENST00000505010 KRTAP9-4Q9BYQ2 154 aa3.85□□□□□ -1.79
TPM3-218ENST00000505010 KRTAP2-2Q9BYT5 123 aa3.84□□□□□ -1.79
TPM3-218ENST00000505010 KRTAP2-1Q9BYU5 128 aa3.84□□□□□ -1.79
TPM3-218ENST00000505010 GPR98Q8WXG9 6306 aa3.84□□□□□ -1.8
TPM3-218ENST00000505010 SPRR2EP22531 72 aa3.8□□□□□ -1.8
TPM3-218ENST00000505010 SPRR2BP35325 72 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 203.8 ms