RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 KRTAP10-1P60331 282 aa4.32□□□□□ -1.72
ATP2C1-208ENST00000504948 C20orf166-AS1Q96NR2 134 aa4.32□□□□□ -1.72
ATP2C1-208ENST00000504948 KRTAP13-1Q8IUC0 172 aa4.31□□□□□ -1.72
ATP2C1-208ENST00000504948 RYR1P21817 5038 aa4.31□□□□□ -1.72
ATP2C1-208ENST00000504948 LRP1BQ9NZR2 4599 aa4.3□□□□□ -1.72
ATP2C1-208ENST00000504948 CAMK2N1Q7Z7J9 78 aa4.29□□□□□ -1.72
ATP2C1-208ENST00000504948 ABCA13Q86UQ4 5058 aa4.28□□□□□ -1.72
ATP2C1-208ENST00000504948 P0C880 135 aa4.27□□□□□ -1.73
ATP2C1-208ENST00000504948 ASB16-AS1Q495Z4 193 aa4.27□□□□□ -1.73
ATP2C1-208ENST00000504948 S4R3F8 94 aa4.25□□□□□ -1.73
ATP2C1-208ENST00000504948 FAT1Q14517 4588 aa4.25□□□□□ -1.73
ATP2C1-208ENST00000504948 M0QZ58 72 aa4.24□□□□□ -1.73
ATP2C1-208ENST00000504948 R4GN34 69 aa4.24□□□□□ -1.73
ATP2C1-208ENST00000504948 Q6ZRN7 208 aaPredicted RBP4.24□□□□□ -1.73
ATP2C1-208ENST00000504948 PCLOQ9Y6V0 5065 aa4.23□□□□□ -1.73
ATP2C1-208ENST00000504948 A0A1B0GVY2 172 aa4.23□□□□□ -1.73
ATP2C1-208ENST00000504948 TNXBP22105 4242 aa4.22□□□□□ -1.73
ATP2C1-208ENST00000504948 KRTAP10-8P60410 259 aa4.18□□□□□ -1.74
ATP2C1-208ENST00000504948 TPRXLQ17RH7 258 aa4.18□□□□□ -1.74
ATP2C1-208ENST00000504948 KRTAP13-3Q3SY46 172 aa4.17□□□□□ -1.74
ATP2C1-208ENST00000504948 KRTAP17-1Q9BYP8 105 aa4.16□□□□□ -1.74
ATP2C1-208ENST00000504948 MYCBP2O75592 4640 aa4.09□□□□□ -1.75
ATP2C1-208ENST00000504948 KRTAP1-4P0C5Y4 121 aa4.07□□□□□ -1.76
ATP2C1-208ENST00000504948 KRTAP13-4Q3LI77 160 aa4.07□□□□□ -1.76
ATP2C1-208ENST00000504948 PLAC4Q8WY50 150 aa4.06□□□□□ -1.76
ATP2C1-208ENST00000504948 KRTAP12-2P59991 146 aa4.06□□□□□ -1.76
ATP2C1-208ENST00000504948 KIAA1109Q2LD37 5005 aa4.06□□□□□ -1.76
ATP2C1-208ENST00000504948 KRTAP3-1Q9BYR8 98 aa4.04□□□□□ -1.76
ATP2C1-208ENST00000504948 MUC17Q685J3 4493 aa4.02□□□□□ -1.77
ATP2C1-208ENST00000504948 KRTAP10-4P60372 401 aaPredicted RBP4□□□□□ -1.77
ATP2C1-208ENST00000504948 J3QL48 77 aa3.98□□□□□ -1.77
ATP2C1-208ENST00000504948 HMCN2Q8NDA2 5059 aa3.97□□□□□ -1.77
ATP2C1-208ENST00000504948 Q5VSD8 79 aa3.96□□□□□ -1.78
ATP2C1-208ENST00000504948 M0R2T5 61 aa3.95□□□□□ -1.78
ATP2C1-208ENST00000504948 KRTAP12-1P59990 96 aa3.9□□□□□ -1.78
ATP2C1-208ENST00000504948 KRTAP10-6P60371 365 aaPredicted RBP3.9□□□□□ -1.79
ATP2C1-208ENST00000504948 KRTAP15-1Q3LI76 137 aa3.89□□□□□ -1.79
ATP2C1-208ENST00000504948 XP32Q5T750 250 aa3.87□□□□□ -1.79
ATP2C1-208ENST00000504948 HERC1Q15751 4861 aa3.86□□□□□ -1.79
ATP2C1-208ENST00000504948 KRTAP4-5Q9BYR2 181 aa3.85□□□□□ -1.79
ATP2C1-208ENST00000504948 LRP1Q07954 4544 aaKnown RBP3.84□□□□□ -1.8
ATP2C1-208ENST00000504948 TNP1P09430 55 aa3.79□□□□□ -1.8
ATP2C1-208ENST00000504948 KRTAP3-2Q9BYR7 98 aa3.77□□□□□ -1.81
ATP2C1-208ENST00000504948 KRTAP3-3Q9BYR6 98 aa3.76□□□□□ -1.81
ATP2C1-208ENST00000504948 RPS29P62273 56 aaKnown RBP3.75□□□□□ -1.81
ATP2C1-208ENST00000504948 SEC61BP60468 96 aaKnown RBP3.72□□□□□ -1.81
ATP2C1-208ENST00000504948 MT1HL1P0DM35 61 aa3.71□□□□□ -1.82
ATP2C1-208ENST00000504948 LORP23490 312 aaPredicted RBP3.66□□□□□ -1.82
ATP2C1-208ENST00000504948 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
ATP2C1-208ENST00000504948 PP632Q6XCG6 107 aa3.63□□□□□ -1.83
ATP2C1-208ENST00000504948 FLGP20930 4061 aaPredicted RBP3.61□□□□□ -1.83
ATP2C1-208ENST00000504948 LPAP08519 4548 aa3.61□□□□□ -1.83
ATP2C1-208ENST00000504948 UBR4Q5T4S7 5183 aa3.58□□□□□ -1.84
ATP2C1-208ENST00000504948 RNF213Q63HN8 5207 aa3.55□□□□□ -1.84
ATP2C1-208ENST00000504948 LRP2P98164 4655 aa3.52□□□□□ -1.85
ATP2C1-208ENST00000504948 KRTAP10-10P60014 251 aa3.51□□□□□ -1.85
ATP2C1-208ENST00000504948 LCE2AQ5TA79 106 aaPredicted RBP3.5□□□□□ -1.85
ATP2C1-208ENST00000504948 SYNE1Q8NF91 8797 aaKnown RBP3.48□□□□□ -1.85
ATP2C1-208ENST00000504948 FAT4Q6V0I7 4981 aa3.48□□□□□ -1.85
ATP2C1-208ENST00000504948 KRTAP19-2Q3LHN2 52 aa3.44□□□□□ -1.86
ATP2C1-208ENST00000504948 PRO2289Q9P1D8 64 aa3.37□□□□□ -1.87
ATP2C1-208ENST00000504948 LCE3AQ5TA76 89 aa3.36□□□□□ -1.87
ATP2C1-208ENST00000504948 LCE2CQ5TA81 110 aa3.35□□□□□ -1.87
ATP2C1-208ENST00000504948 LCE2DQ5TA82 110 aaPredicted RBP3.34□□□□□ -1.87
ATP2C1-208ENST00000504948 MUC2Q02817 5179 aa3.34□□□□□ -1.88
ATP2C1-208ENST00000504948 CRCT1Q9UGL9 99 aa3.33□□□□□ -1.88
ATP2C1-208ENST00000504948 KRTAP4-1Q9BYQ7 146 aa3.28□□□□□ -1.88
ATP2C1-208ENST00000504948 FSIP2Q5CZC0 6907 aa3.23□□□□□ -1.89
ATP2C1-208ENST00000504948 KRTAP12-3P60328 96 aa3.22□□□□□ -1.89
ATP2C1-208ENST00000504948 INE1O15225 51 aa3.22□□□□□ -1.89
ATP2C1-208ENST00000504948 KRTAP10-12P60413 245 aa3.19□□□□□ -1.9
ATP2C1-208ENST00000504948 KRTAP9-2Q9BYQ4 174 aa3.13□□□□□ -1.91
ATP2C1-208ENST00000504948 MT1HP80294 61 aa3.12□□□□□ -1.91
ATP2C1-208ENST00000504948 DSTQ03001 7570 aaKnown RBP3.11□□□□□ -1.91
ATP2C1-208ENST00000504948 KRTAP10-5P60370 271 aa3.08□□□□□ -1.92
ATP2C1-208ENST00000504948 SSPOA2VEC9 5147 aa3.08□□□□□ -1.92
ATP2C1-208ENST00000504948 KRTAP9-8Q9BYQ0 159 aa3.06□□□□□ -1.92
ATP2C1-208ENST00000504948 FCGBPQ9Y6R7 5405 aaPredicted RBP3.04□□□□□ -1.92
ATP2C1-208ENST00000504948 KRTAP9-6A0A140TA67 174 aa3.02□□□□□ -1.93
ATP2C1-208ENST00000504948 USH2AO75445 5202 aa3.01□□□□□ -1.93
ATP2C1-208ENST00000504948 KMT2DO14686 5537 aa2.97□□□□□ -1.93
ATP2C1-208ENST00000504948 KRTAP9-3Q9BYQ3 159 aa2.97□□□□□ -1.93
ATP2C1-208ENST00000504948 KRTAP10-7P60409 375 aaPredicted RBP2.95□□□□□ -1.94
ATP2C1-208ENST00000504948 MT1FP04733 61 aa2.95□□□□□ -1.94
ATP2C1-208ENST00000504948 KRTAP19-5Q3LI72 72 aa2.94□□□□□ -1.94
ATP2C1-208ENST00000504948 KRTAP4-7Q9BYR0 210 aa2.93□□□□□ -1.94
ATP2C1-208ENST00000504948 KRTAP19-1Q8IUB9 90 aa2.93□□□□□ -1.94
ATP2C1-208ENST00000504948 SPRR5A0A1B0GTR4 108 aa2.92□□□□□ -1.94
ATP2C1-208ENST00000504948 KRTAP23-1A1A580 65 aa2.91□□□□□ -1.94
ATP2C1-208ENST00000504948 MT2AP02795 61 aa2.91□□□□□ -1.94
ATP2C1-208ENST00000504948 KRTAP4-8A0A0G2JLE6 195 aa2.9□□□□□ -1.95
ATP2C1-208ENST00000504948 KRTAP19-6Q3LI70 58 aa2.9□□□□□ -1.95
ATP2C1-208ENST00000504948 KRTAP4-8Q9BYQ9 185 aa2.9□□□□□ -1.95
ATP2C1-208ENST00000504948 KRTAP8-1Q8IUC2 63 aa2.9□□□□□ -1.95
ATP2C1-208ENST00000504948 LCE2BO14633 110 aa2.88□□□□□ -1.95
ATP2C1-208ENST00000504948 SPRR2GQ9BYE4 73 aa2.86□□□□□ -1.95
ATP2C1-208ENST00000504948 LCE3CQ5T5A8 94 aa2.85□□□□□ -1.95
ATP2C1-208ENST00000504948 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.82□□□□□ -1.96
ATP2C1-208ENST00000504948 KRTAP12-4P60329 112 aa2.81□□□□□ -1.96
ATP2C1-208ENST00000504948 MT1XP80297 61 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms