RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 MT-ATP8P03928 68 aa11.77□□□□□ -0.53
PVT1-201ENST00000504719 IMUPQ9GZP8 106 aa11.75□□□□□ -0.53
PVT1-201ENST00000504719 KLKP1Q107X0 134 aa11.72□□□□□ -0.53
PVT1-201ENST00000504719 CSAG1Q6PB30 78 aa11.72□□□□□ -0.53
PVT1-201ENST00000504719 KRTAP3-3Q9BYR6 98 aa11.65□□□□□ -0.54
PVT1-201ENST00000504719 H3BPC8 53 aa11.64□□□□□ -0.55
PVT1-201ENST00000504719 FAM236AA0A1B0GUQ0 79 aa11.59□□□□□ -0.55
PVT1-201ENST00000504719 FAM236BA0A1B0GV22 79 aa11.59□□□□□ -0.55
PVT1-201ENST00000504719 A8MUN3 132 aa11.58□□□□□ -0.56
PVT1-201ENST00000504719 SMIM20Q8N5G0 67 aa11.51□□□□□ -0.57
PVT1-201ENST00000504719 MACF1Q9UPN3 7388 aaKnown RBP11.51□□□□□ -0.57
PVT1-201ENST00000504719 TRAV7A0A075B6U4 112 aa11.5□□□□□ -0.57
PVT1-201ENST00000504719 NDUFC1O43677 76 aa11.49□□□□□ -0.57
PVT1-201ENST00000504719 SPRR2GQ9BYE4 73 aa11.41□□□□□ -0.58
PVT1-201ENST00000504719 MT1BP07438 61 aa11.38□□□□□ -0.59
PVT1-201ENST00000504719 SYNE2Q8WXH0 6885 aaKnown RBP11.38□□□□□ -0.59
PVT1-201ENST00000504719 DMAC1Q96GE9 116 aa11.37□□□□□ -0.59
PVT1-201ENST00000504719 KRTAP19-8Q3LI54 63 aa11.36□□□□□ -0.59
PVT1-201ENST00000504719 Q5VV11 94 aa11.35□□□□□ -0.59
PVT1-201ENST00000504719 H0YAA0 97 aa11.28□□□□□ -0.6
PVT1-201ENST00000504719 KRTAP6-3Q3LI67 103 aa11.25□□□□□ -0.61
PVT1-201ENST00000504719 SNURFQ9Y675 71 aa11.25□□□□□ -0.61
PVT1-201ENST00000504719 A6NN06 94 aa11.24□□□□□ -0.61
PVT1-201ENST00000504719 SERP2Q8N6R1 65 aa11.23□□□□□ -0.61
PVT1-201ENST00000504719 CRIPTQ9P021 101 aa11.21□□□□□ -0.61
PVT1-201ENST00000504719 ADM2Q7Z4H4 148 aa11.2□□□□□ -0.62
PVT1-201ENST00000504719 C20orf197Q8N268 126 aa11.17□□□□□ -0.62
PVT1-201ENST00000504719 ACYP2P14621 99 aa11.16□□□□□ -0.62
PVT1-201ENST00000504719 KRTAP10-5P60370 271 aa11.12□□□□□ -0.63
PVT1-201ENST00000504719 SPANXA2-OT1Q8N9U9 137 aa11.03□□□□□ -0.64
PVT1-201ENST00000504719 P0C880 135 aa10.99□□□□□ -0.65
PVT1-201ENST00000504719 CHKB-CPT1BH3BT56 60 aa10.97□□□□□ -0.65
PVT1-201ENST00000504719 COX7CP15954 63 aa10.96□□□□□ -0.65
PVT1-201ENST00000504719 SPTSSBQ8NFR3 76 aa10.96□□□□□ -0.65
PVT1-201ENST00000504719 KRTAP3-2Q9BYR7 98 aa10.94□□□□□ -0.66
PVT1-201ENST00000504719 R4GN34 69 aa10.89□□□□□ -0.67
PVT1-201ENST00000504719 M0QZ58 72 aa10.82□□□□□ -0.68
PVT1-201ENST00000504719 CYSTM1Q9H1C7 97 aa10.77□□□□□ -0.69
PVT1-201ENST00000504719 MUC12Q9UKN1 5478 aa10.76□□□□□ -0.69
PVT1-201ENST00000504719 ANAPC13Q9BS18 74 aa10.75□□□□□ -0.69
PVT1-201ENST00000504719 H7BZZ5 65 aa10.73□□□□□ -0.69
PVT1-201ENST00000504719 KRTAP5-9P26371 169 aa10.72□□□□□ -0.69
PVT1-201ENST00000504719 COA5Q86WW8 74 aa10.72□□□□□ -0.69
PVT1-201ENST00000504719 NEBP20929 6669 aa10.7□□□□□ -0.7
PVT1-201ENST00000504719 PLAC4Q8WY50 150 aa10.68□□□□□ -0.7
PVT1-201ENST00000504719 LINC01554Q52M75 96 aa10.66□□□□□ -0.7
PVT1-201ENST00000504719 PRO2289Q9P1D8 64 aa10.66□□□□□ -0.7
PVT1-201ENST00000504719 MT1XP80297 61 aa10.65□□□□□ -0.7
PVT1-201ENST00000504719 CCDC179H3BU77 68 aa10.54□□□□□ -0.72
PVT1-201ENST00000504719 KMT2DO14686 5537 aa10.53□□□□□ -0.72
PVT1-201ENST00000504719 MDN1Q9NU22 5596 aa10.43□□□□□ -0.74
PVT1-201ENST00000504719 SEC61GP60059 68 aa10.42□□□□□ -0.74
PVT1-201ENST00000504719 KRTAP20-1Q3LI63 56 aa10.42□□□□□ -0.74
PVT1-201ENST00000504719 KRTAP12-2P59991 146 aa10.41□□□□□ -0.74
PVT1-201ENST00000504719 KRTAP13-4Q3LI77 160 aa10.4□□□□□ -0.74
PVT1-201ENST00000504719 SERP1Q9Y6X1 66 aa10.39□□□□□ -0.75
PVT1-201ENST00000504719 SPRR2FQ96RM1 72 aa10.37□□□□□ -0.75
PVT1-201ENST00000504719 KRTAP8-1Q8IUC2 63 aa10.33□□□□□ -0.76
PVT1-201ENST00000504719 ATP5EP56381 51 aaPredicted RBP10.28□□□□□ -0.76
PVT1-201ENST00000504719 SPRR2EP22531 72 aa10.24□□□□□ -0.77
PVT1-201ENST00000504719 SPRR2BP35325 72 aa10.24□□□□□ -0.77
PVT1-201ENST00000504719 SPRR2AP35326 72 aa10.24□□□□□ -0.77
PVT1-201ENST00000504719 A0A1B0GU33 70 aa10.21□□□□□ -0.77
PVT1-201ENST00000504719 KRTAP4-8A0A0G2JLE6 195 aa10.2□□□□□ -0.78
PVT1-201ENST00000504719 KRTAP4-8Q9BYQ9 185 aa10.2□□□□□ -0.78
PVT1-201ENST00000504719 A0A1B0GU69 56 aa10.17□□□□□ -0.78
PVT1-201ENST00000504719 KRTAP10-7P60409 375 aaPredicted RBP10.17□□□□□ -0.78
PVT1-201ENST00000504719 SPATA8Q6RVD6 105 aa10.17□□□□□ -0.78
PVT1-201ENST00000504719 KRTAP2-3P0C7H8 128 aa10.15□□□□□ -0.78
PVT1-201ENST00000504719 KRTAP2-4Q9BYR9 128 aa10.15□□□□□ -0.78
PVT1-201ENST00000504719 A0A0D9SG42 100 aa10.13□□□□□ -0.79
PVT1-201ENST00000504719 KRTAP10-12P60413 245 aa10.13□□□□□ -0.79
PVT1-201ENST00000504719 TMEM258P61165 79 aa10.13□□□□□ -0.79
PVT1-201ENST00000504719 LCE1AQ5T7P2 110 aa10.1□□□□□ -0.79
PVT1-201ENST00000504719 CAMK2N1Q7Z7J9 78 aa10.07□□□□□ -0.8
PVT1-201ENST00000504719 SPINT4Q6UDR6 99 aa9.96□□□□□ -0.82
PVT1-201ENST00000504719 PRR15LQ9BU68 103 aa9.95□□□□□ -0.82
PVT1-201ENST00000504719 KRTAP12-1P59990 96 aa9.92□□□□□ -0.82
PVT1-201ENST00000504719 LINC01558Q9Y6Z2 57 aa9.92□□□□□ -0.82
PVT1-201ENST00000504719 SMIM26A0A096LP01 95 aa9.91□□□□□ -0.82
PVT1-201ENST00000504719 SPRR2DP22532 72 aa9.89□□□□□ -0.83
PVT1-201ENST00000504719 A8MU10 97 aa9.86□□□□□ -0.83
PVT1-201ENST00000504719 KRTAP2-2Q9BYT5 123 aa9.83□□□□□ -0.84
PVT1-201ENST00000504719 KRTAP2-1Q9BYU5 128 aa9.83□□□□□ -0.84
PVT1-201ENST00000504719 UQCR11O14957 56 aa9.63□□□□□ -0.87
PVT1-201ENST00000504719 LCE3BQ5TA77 95 aa9.63□□□□□ -0.87
PVT1-201ENST00000504719 KRTAP19-7Q3SYF9 63 aa9.53□□□□□ -0.88
PVT1-201ENST00000504719 V9GYY9 64 aa9.52□□□□□ -0.89
PVT1-201ENST00000504719 Q1T7F1 81 aa9.48□□□□□ -0.89
PVT1-201ENST00000504719 PCP4P48539 62 aa9.47□□□□□ -0.89
PVT1-201ENST00000504719 PSPHP1O15172 72 aa9.46□□□□□ -0.9
PVT1-201ENST00000504719 MT1EP04732 61 aa9.45□□□□□ -0.9
PVT1-201ENST00000504719 MIR22HGQ0VDD5 57 aa9.45□□□□□ -0.9
PVT1-201ENST00000504719 C10orf95Q9H7T3 257 aa9.45□□□□□ -0.9
PVT1-201ENST00000504719 LCE5AQ5TCM9 118 aa9.41□□□□□ -0.9
PVT1-201ENST00000504719 KRTAP19-3Q7Z4W3 81 aa9.37□□□□□ -0.91
PVT1-201ENST00000504719 TNP1P09430 55 aa9.35□□□□□ -0.91
PVT1-201ENST00000504719 KRTAP19-5Q3LI72 72 aa9.27□□□□□ -0.93
PVT1-201ENST00000504719 RPS28P62857 69 aaKnown RBP9.26□□□□□ -0.93
PVT1-201ENST00000504719 LCE3AQ5TA76 89 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms