RNA–Protein interactions for RNA: ENST00000504309.5

SDHA-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-204ENST00000504309 SPATA8Q6RVD6 105 aa9.26□□□□□ -0.93
SDHA-204ENST00000504309 A6NN06 94 aa9.24□□□□□ -0.93
SDHA-204ENST00000504309 MIR22HGQ0VDD5 57 aa9.24□□□□□ -0.93
SDHA-204ENST00000504309 LRP2P98164 4655 aa9.23□□□□□ -0.93
SDHA-204ENST00000504309 TPRXLQ17RH7 258 aa9.22□□□□□ -0.93
SDHA-204ENST00000504309 LPAP08519 4548 aa9.2□□□□□ -0.94
SDHA-204ENST00000504309 KRTAP3-3Q9BYR6 98 aa9.13□□□□□ -0.95
SDHA-204ENST00000504309 KTN1-AS1Q86SY8 53 aa9.09□□□□□ -0.95
SDHA-204ENST00000504309 H0YAA0 97 aa9.08□□□□□ -0.96
SDHA-204ENST00000504309 S4R3F8 94 aa9.08□□□□□ -0.96
SDHA-204ENST00000504309 A0A1B0GU33 70 aa9.06□□□□□ -0.96
SDHA-204ENST00000504309 H1FX-AS1Q4G0G2 97 aa9.06□□□□□ -0.96
SDHA-204ENST00000504309 HERC2O95714 4834 aa9.04□□□□□ -0.96
SDHA-204ENST00000504309 BIRC6Q9NR09 4857 aa8.96□□□□□ -0.98
SDHA-204ENST00000504309 J3QL48 77 aa8.96□□□□□ -0.98
SDHA-204ENST00000504309 KRTAP10-6P60371 365 aaPredicted RBP8.95□□□□□ -0.98
SDHA-204ENST00000504309 RBM12B-AS1Q9P1G2 102 aa8.93□□□□□ -0.98
SDHA-204ENST00000504309 KRTAP3-2Q9BYR7 98 aa8.92□□□□□ -0.98
SDHA-204ENST00000504309 MUC17Q685J3 4493 aa8.85□□□□□ -0.99
SDHA-204ENST00000504309 SEC61BP60468 96 aaKnown RBP8.85□□□□□ -0.99
SDHA-204ENST00000504309 P0C880 135 aa8.83□□□□□ -1
SDHA-204ENST00000504309 KRTAP13-4Q3LI77 160 aa8.83□□□□□ -1
SDHA-204ENST00000504309 ADM2Q7Z4H4 148 aa8.82□□□□□ -1
SDHA-204ENST00000504309 PRAC1Q96KF2 57 aa8.79□□□□□ -1
SDHA-204ENST00000504309 KRTAP4-1Q9BYQ7 146 aa8.79□□□□□ -1
SDHA-204ENST00000504309 CSAG1Q6PB30 78 aa8.77□□□□□ -1.01
SDHA-204ENST00000504309 PCLOQ9Y6V0 5065 aa8.71□□□□□ -1.01
SDHA-204ENST00000504309 A0A0D9SG42 100 aa8.69□□□□□ -1.02
SDHA-204ENST00000504309 K7ERS5 55 aa8.66□□□□□ -1.02
SDHA-204ENST00000504309 HERC1Q15751 4861 aa8.62□□□□□ -1.03
SDHA-204ENST00000504309 KRTAP19-2Q3LHN2 52 aa8.6□□□□□ -1.03
SDHA-204ENST00000504309 MUC2Q02817 5179 aa8.55□□□□□ -1.04
SDHA-204ENST00000504309 HMCN2Q8NDA2 5059 aa8.54□□□□□ -1.04
SDHA-204ENST00000504309 M0QZ58 72 aa8.51□□□□□ -1.05
SDHA-204ENST00000504309 KRTAP12-2P59991 146 aa8.5□□□□□ -1.05
SDHA-204ENST00000504309 KRTAP12-1P59990 96 aa8.46□□□□□ -1.05
SDHA-204ENST00000504309 ROMO1P60602 79 aa8.44□□□□□ -1.06
SDHA-204ENST00000504309 SPINT4Q6UDR6 99 aa8.41□□□□□ -1.06
SDHA-204ENST00000504309 LORP23490 312 aaPredicted RBP8.39□□□□□ -1.07
SDHA-204ENST00000504309 R4GN34 69 aa8.39□□□□□ -1.07
SDHA-204ENST00000504309 KRTAP25-1Q3LHN0 102 aa8.38□□□□□ -1.07
SDHA-204ENST00000504309 FLGP20930 4061 aaPredicted RBP8.38□□□□□ -1.07
SDHA-204ENST00000504309 CRIPTQ9P021 101 aa8.36□□□□□ -1.07
SDHA-204ENST00000504309 LINC01554Q52M75 96 aa8.36□□□□□ -1.07
SDHA-204ENST00000504309 LCE2CQ5TA81 110 aa8.2□□□□□ -1.1
SDHA-204ENST00000504309 FAT4Q6V0I7 4981 aa8.19□□□□□ -1.1
SDHA-204ENST00000504309 UBR4Q5T4S7 5183 aa8.15□□□□□ -1.1
SDHA-204ENST00000504309 C10orf95Q9H7T3 257 aa8.15□□□□□ -1.11
SDHA-204ENST00000504309 RNF213Q63HN8 5207 aa8.14□□□□□ -1.11
SDHA-204ENST00000504309 MT1HP80294 61 aa8□□□□□ -1.13
SDHA-204ENST00000504309 M0R2T5 61 aa7.94□□□□□ -1.14
SDHA-204ENST00000504309 CAMK2N1Q7Z7J9 78 aa7.91□□□□□ -1.14
SDHA-204ENST00000504309 SPRR2GQ9BYE4 73 aa7.83□□□□□ -1.16
SDHA-204ENST00000504309 KRTAP19-1Q8IUB9 90 aa7.82□□□□□ -1.16
SDHA-204ENST00000504309 MT2AP02795 61 aa7.8□□□□□ -1.16
SDHA-204ENST00000504309 MT1FP04733 61 aa7.79□□□□□ -1.16
SDHA-204ENST00000504309 KRTAP9-8Q9BYQ0 159 aa7.77□□□□□ -1.17
SDHA-204ENST00000504309 KRTAP10-10P60014 251 aa7.73□□□□□ -1.17
SDHA-204ENST00000504309 PLAC4Q8WY50 150 aa7.64□□□□□ -1.19
SDHA-204ENST00000504309 TNP1P09430 55 aa7.58□□□□□ -1.2
SDHA-204ENST00000504309 PP632Q6XCG6 107 aa7.58□□□□□ -1.2
SDHA-204ENST00000504309 KRTAP15-1Q3LI76 137 aa7.56□□□□□ -1.2
SDHA-204ENST00000504309 KRTAP19-8Q3LI54 63 aa7.54□□□□□ -1.2
SDHA-204ENST00000504309 MT1BP07438 61 aa7.47□□□□□ -1.21
SDHA-204ENST00000504309 KRTAP9-3Q9BYQ3 159 aa7.45□□□□□ -1.22
SDHA-204ENST00000504309 KRTAP23-1A1A580 65 aa7.42□□□□□ -1.22
SDHA-204ENST00000504309 KRTAP10-5P60370 271 aa7.34□□□□□ -1.23
SDHA-204ENST00000504309 MT1XP80297 61 aa7.34□□□□□ -1.23
SDHA-204ENST00000504309 LCE2AQ5TA79 106 aaPredicted RBP7.32□□□□□ -1.24
SDHA-204ENST00000504309 LCE3AQ5TA76 89 aa7.26□□□□□ -1.25
SDHA-204ENST00000504309 NDUFAF8A1L188 74 aa7.23□□□□□ -1.25
SDHA-204ENST00000504309 LCE2BO14633 110 aa7.21□□□□□ -1.26
SDHA-204ENST00000504309 H3BS24 57 aa7.14□□□□□ -1.27
SDHA-204ENST00000504309 KRTAP10-7P60409 375 aaPredicted RBP7.1□□□□□ -1.27
SDHA-204ENST00000504309 KRTAP10-12P60413 245 aa7.09□□□□□ -1.27
SDHA-204ENST00000504309 PRO2289Q9P1D8 64 aa7.08□□□□□ -1.28
SDHA-204ENST00000504309 USH2AO75445 5202 aa7.08□□□□□ -1.28
SDHA-204ENST00000504309 KRTAP8-1Q8IUC2 63 aa7.07□□□□□ -1.28
SDHA-204ENST00000504309 SPRR5A0A1B0GTR4 108 aa6.98□□□□□ -1.29
SDHA-204ENST00000504309 LUZP6Q538Z0 58 aa6.93□□□□□ -1.3
SDHA-204ENST00000504309 KRTAP12-3P60328 96 aa6.91□□□□□ -1.3
SDHA-204ENST00000504309 KMT2DO14686 5537 aa6.8□□□□□ -1.32
SDHA-204ENST00000504309 SSPOA2VEC9 5147 aa6.77□□□□□ -1.33
SDHA-204ENST00000504309 KRTAP19-5Q3LI72 72 aa6.74□□□□□ -1.33
SDHA-204ENST00000504309 KRTAP4-8A0A0G2JLE6 195 aa6.73□□□□□ -1.33
SDHA-204ENST00000504309 KRTAP4-8Q9BYQ9 185 aa6.73□□□□□ -1.33
SDHA-204ENST00000504309 KRTAP19-6Q3LI70 58 aa6.57□□□□□ -1.36
SDHA-204ENST00000504309 FSIP2Q5CZC0 6907 aa6.55□□□□□ -1.36
SDHA-204ENST00000504309 KRTAP19-7Q3SYF9 63 aa6.54□□□□□ -1.36
SDHA-204ENST00000504309 LCE3CQ5T5A8 94 aa6.49□□□□□ -1.37
SDHA-204ENST00000504309 LCE2DQ5TA82 110 aaPredicted RBP6.38□□□□□ -1.39
SDHA-204ENST00000504309 MT1EP04732 61 aa6.37□□□□□ -1.39
SDHA-204ENST00000504309 A0A0A0MQY5 61 aa6.34□□□□□ -1.4
SDHA-204ENST00000504309 MT1LQ93083 61 aa6.32□□□□□ -1.4
SDHA-204ENST00000504309 KRTAP4-7Q9BYR0 210 aa6.3□□□□□ -1.4
SDHA-204ENST00000504309 FCGBPQ9Y6R7 5405 aaPredicted RBP6.29□□□□□ -1.4
SDHA-204ENST00000504309 KRTAP9-6A8MVA2 160 aa6.26□□□□□ -1.41
SDHA-204ENST00000504309 KRTAP19-4Q3LI73 84 aa6.21□□□□□ -1.42
SDHA-204ENST00000504309 MUC12Q9UKN1 5478 aa6.12□□□□□ -1.43
SDHA-204ENST00000504309 KRTAP19-3Q7Z4W3 81 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms