RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 PCP4P48539 62 aa9.89□□□□□ -0.83
CDC42SE2-206ENST00000503291 KRTAP3-3Q9BYR6 98 aa9.84□□□□□ -0.83
CDC42SE2-206ENST00000503291 CSAG1Q6PB30 78 aa9.78□□□□□ -0.84
CDC42SE2-206ENST00000503291 KRTAP10-6P60371 365 aaPredicted RBP9.77□□□□□ -0.85
CDC42SE2-206ENST00000503291 TMEM258P61165 79 aa9.75□□□□□ -0.85
CDC42SE2-206ENST00000503291 LORP23490 312 aaPredicted RBP9.73□□□□□ -0.85
CDC42SE2-206ENST00000503291 CHKB-CPT1BH3BT56 60 aa9.73□□□□□ -0.85
CDC42SE2-206ENST00000503291 ATP5EP56381 51 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE2-206ENST00000503291 COA5Q86WW8 74 aa9.71□□□□□ -0.86
CDC42SE2-206ENST00000503291 KRTAP9-8Q9BYQ0 159 aa9.66□□□□□ -0.86
CDC42SE2-206ENST00000503291 SPTSSBQ8NFR3 76 aa9.61□□□□□ -0.87
CDC42SE2-206ENST00000503291 LCE2DQ5TA82 110 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE2-206ENST00000503291 MT2AP02795 61 aa9.58□□□□□ -0.88
CDC42SE2-206ENST00000503291 MT1FP04733 61 aa9.51□□□□□ -0.89
CDC42SE2-206ENST00000503291 H0YAA0 97 aa9.49□□□□□ -0.89
CDC42SE2-206ENST00000503291 KRTAP10-10P60014 251 aa9.49□□□□□ -0.89
CDC42SE2-206ENST00000503291 ADM2Q7Z4H4 148 aa9.46□□□□□ -0.9
CDC42SE2-206ENST00000503291 SERP1Q9Y6X1 66 aa9.44□□□□□ -0.9
CDC42SE2-206ENST00000503291 KRTAP3-2Q9BYR7 98 aa9.38□□□□□ -0.91
CDC42SE2-206ENST00000503291 P0C880 135 aa9.34□□□□□ -0.91
CDC42SE2-206ENST00000503291 KRTAP9-3Q9BYQ3 159 aa9.32□□□□□ -0.92
CDC42SE2-206ENST00000503291 SEC61GP60059 68 aa9.26□□□□□ -0.93
CDC42SE2-206ENST00000503291 CRIPTQ9P021 101 aa9.24□□□□□ -0.93
CDC42SE2-206ENST00000503291 RPS28P62857 69 aaKnown RBP9.24□□□□□ -0.93
CDC42SE2-206ENST00000503291 A0A1B0GU69 56 aa9.2□□□□□ -0.94
CDC42SE2-206ENST00000503291 KRTAP19-1Q8IUB9 90 aa9.19□□□□□ -0.94
CDC42SE2-206ENST00000503291 LINC01558Q9Y6Z2 57 aa9.19□□□□□ -0.94
CDC42SE2-206ENST00000503291 SPRR2GQ9BYE4 73 aa9.17□□□□□ -0.94
CDC42SE2-206ENST00000503291 R4GN34 69 aa9.15□□□□□ -0.94
CDC42SE2-206ENST00000503291 SMIM26A0A096LP01 95 aa9.14□□□□□ -0.95
CDC42SE2-206ENST00000503291 LCE2BO14633 110 aa9.14□□□□□ -0.95
CDC42SE2-206ENST00000503291 KRTAP9-2Q9BYQ4 174 aa9.12□□□□□ -0.95
CDC42SE2-206ENST00000503291 M0QZ58 72 aa9.11□□□□□ -0.95
CDC42SE2-206ENST00000503291 PRR15LQ9BU68 103 aa9.09□□□□□ -0.95
CDC42SE2-206ENST00000503291 Q1T7F1 81 aa9.07□□□□□ -0.96
CDC42SE2-206ENST00000503291 V9GYY9 64 aa9.07□□□□□ -0.96
CDC42SE2-206ENST00000503291 A0A1B0GU33 70 aa9.06□□□□□ -0.96
CDC42SE2-206ENST00000503291 KRTAP13-4Q3LI77 160 aa9.01□□□□□ -0.97
CDC42SE2-206ENST00000503291 KRTAP19-8Q3LI54 63 aa8.98□□□□□ -0.97
CDC42SE2-206ENST00000503291 FSIP2Q5CZC0 6907 aa8.98□□□□□ -0.97
CDC42SE2-206ENST00000503291 USH2AO75445 5202 aa8.97□□□□□ -0.97
CDC42SE2-206ENST00000503291 LINC01554Q52M75 96 aa8.97□□□□□ -0.97
CDC42SE2-206ENST00000503291 PSPHP1O15172 72 aa8.96□□□□□ -0.98
CDC42SE2-206ENST00000503291 SPATA8Q6RVD6 105 aa8.94□□□□□ -0.98
CDC42SE2-206ENST00000503291 Q5VV11 94 aa8.93□□□□□ -0.98
CDC42SE2-206ENST00000503291 MT1BP07438 61 aa8.91□□□□□ -0.98
CDC42SE2-206ENST00000503291 UQCR11O14957 56 aa8.83□□□□□ -1
CDC42SE2-206ENST00000503291 A0A0D9SG42 100 aa8.81□□□□□ -1
CDC42SE2-206ENST00000503291 PLAC4Q8WY50 150 aa8.77□□□□□ -1.01
CDC42SE2-206ENST00000503291 A6NN06 94 aa8.76□□□□□ -1.01
CDC42SE2-206ENST00000503291 SSPOA2VEC9 5147 aa8.76□□□□□ -1.01
CDC42SE2-206ENST00000503291 A8MU10 97 aa8.75□□□□□ -1.01
CDC42SE2-206ENST00000503291 CRCT1Q9UGL9 99 aa8.73□□□□□ -1.01
CDC42SE2-206ENST00000503291 MIR22HGQ0VDD5 57 aa8.7□□□□□ -1.02
CDC42SE2-206ENST00000503291 A6NED7 52 aa8.68□□□□□ -1.02
CDC42SE2-206ENST00000503291 KRTAP19-6Q3LI70 58 aa8.67□□□□□ -1.02
CDC42SE2-206ENST00000503291 KRTAP12-1P59990 96 aa8.64□□□□□ -1.03
CDC42SE2-206ENST00000503291 SPINT4Q6UDR6 99 aa8.64□□□□□ -1.03
CDC42SE2-206ENST00000503291 KRTAP12-2P59991 146 aa8.6□□□□□ -1.03
CDC42SE2-206ENST00000503291 KRTAP9-6A0A140TA67 174 aa8.56□□□□□ -1.04
CDC42SE2-206ENST00000503291 KRTAP10-5P60370 271 aa8.54□□□□□ -1.04
CDC42SE2-206ENST00000503291 CAMK2N1Q7Z7J9 78 aa8.53□□□□□ -1.04
CDC42SE2-206ENST00000503291 MT1XP80297 61 aa8.52□□□□□ -1.05
CDC42SE2-206ENST00000503291 PRO2289Q9P1D8 64 aa8.48□□□□□ -1.05
CDC42SE2-206ENST00000503291 FCGBPQ9Y6R7 5405 aaPredicted RBP8.47□□□□□ -1.05
CDC42SE2-206ENST00000503291 CDC42SE1Q9NRR8 79 aa8.44□□□□□ -1.06
CDC42SE2-206ENST00000503291 K7ERS5 55 aa8.37□□□□□ -1.07
CDC42SE2-206ENST00000503291 BRK1Q8WUW1 75 aa8.25□□□□□ -1.09
CDC42SE2-206ENST00000503291 C10orf95Q9H7T3 257 aa8.2□□□□□ -1.1
CDC42SE2-206ENST00000503291 KRTAP10-7P60409 375 aaPredicted RBP8.17□□□□□ -1.1
CDC42SE2-206ENST00000503291 MACF1Q9UPN3 7388 aaKnown RBP8.14□□□□□ -1.11
CDC42SE2-206ENST00000503291 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.09□□□□□ -1.11
CDC42SE2-206ENST00000503291 KRTAP10-12P60413 245 aa8.09□□□□□ -1.11
CDC42SE2-206ENST00000503291 TNP1P09430 55 aa8.03□□□□□ -1.12
CDC42SE2-206ENST00000503291 KMT2DO14686 5537 aa7.99□□□□□ -1.13
CDC42SE2-206ENST00000503291 KRTAP4-8A0A0G2JLE6 195 aa7.98□□□□□ -1.13
CDC42SE2-206ENST00000503291 KRTAP4-8Q9BYQ9 185 aa7.98□□□□□ -1.13
CDC42SE2-206ENST00000503291 SYNE2Q8WXH0 6885 aaKnown RBP7.98□□□□□ -1.13
CDC42SE2-206ENST00000503291 ROMO1P60602 79 aa7.96□□□□□ -1.14
CDC42SE2-206ENST00000503291 KRTAP25-1Q3LHN0 102 aa7.9□□□□□ -1.14
CDC42SE2-206ENST00000503291 KRTAP8-1Q8IUC2 63 aa7.85□□□□□ -1.15
CDC42SE2-206ENST00000503291 PRO0628Q9UI54 55 aa7.83□□□□□ -1.16
CDC42SE2-206ENST00000503291 PMAIP1Q13794 54 aa7.8□□□□□ -1.16
CDC42SE2-206ENST00000503291 KRTAP9-7A8MTY7 169 aa7.79□□□□□ -1.16
CDC42SE2-206ENST00000503291 KRTAP6-3Q3LI67 103 aa7.78□□□□□ -1.16
CDC42SE2-206ENST00000503291 LCE3AQ5TA76 89 aa7.77□□□□□ -1.17
CDC42SE2-206ENST00000503291 KRTAP5-9P26371 169 aa7.71□□□□□ -1.17
CDC42SE2-206ENST00000503291 SPRR2FQ96RM1 72 aa7.67□□□□□ -1.18
CDC42SE2-206ENST00000503291 KRTAP23-1A1A580 65 aa7.63□□□□□ -1.19
CDC42SE2-206ENST00000503291 KRTAP19-7Q3SYF9 63 aa7.61□□□□□ -1.19
CDC42SE2-206ENST00000503291 KRTAP19-5Q3LI72 72 aa7.6□□□□□ -1.19
CDC42SE2-206ENST00000503291 MUC12Q9UKN1 5478 aa7.53□□□□□ -1.2
CDC42SE2-206ENST00000503291 PP632Q6XCG6 107 aa7.52□□□□□ -1.2
CDC42SE2-206ENST00000503291 MT1EP04732 61 aa7.49□□□□□ -1.21
CDC42SE2-206ENST00000503291 KRTAP12-3P60328 96 aa7.47□□□□□ -1.21
CDC42SE2-206ENST00000503291 MDN1Q9NU22 5596 aa7.43□□□□□ -1.22
CDC42SE2-206ENST00000503291 LCE1AQ5T7P2 110 aa7.39□□□□□ -1.23
CDC42SE2-206ENST00000503291 SPRR2EP22531 72 aa7.38□□□□□ -1.23
CDC42SE2-206ENST00000503291 SPRR2BP35325 72 aa7.38□□□□□ -1.23
CDC42SE2-206ENST00000503291 SPRR2AP35326 72 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms