RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 LINC00575Q6W349 94 aa3.13□□□□□ -1.91
TMEM39A-212ENST00000497993 LIMD2Q9BT23 127 aa3.13□□□□□ -1.91
TMEM39A-212ENST00000497993 A6NN06 94 aa3.12□□□□□ -1.91
TMEM39A-212ENST00000497993 KRTAP9-6A8MVA2 160 aa3.12□□□□□ -1.91
TMEM39A-212ENST00000497993 SERP1Q9Y6X1 66 aa3.12□□□□□ -1.91
TMEM39A-212ENST00000497993 FAT4Q6V0I7 4981 aa3.11□□□□□ -1.91
TMEM39A-212ENST00000497993 C9orf153Q5TBE3 101 aa3.11□□□□□ -1.91
TMEM39A-212ENST00000497993 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.11□□□□□ -1.91
TMEM39A-212ENST00000497993 Q6JHZ5 121 aa3.1□□□□□ -1.91
TMEM39A-212ENST00000497993 CASC2Q6XLA1 102 aa3.1□□□□□ -1.91
TMEM39A-212ENST00000497993 PRO0461Q9UI25 63 aa3.1□□□□□ -1.91
TMEM39A-212ENST00000497993 hADV29S1A0JD25 119 aa3.09□□□□□ -1.91
TMEM39A-212ENST00000497993 PDE6GP18545 87 aa3.09□□□□□ -1.91
TMEM39A-212ENST00000497993 Q6ZQY7 126 aa3.09□□□□□ -1.91
TMEM39A-212ENST00000497993 JMJD7-PLA2G4BH0Y9G9 81 aa3.08□□□□□ -1.92
TMEM39A-212ENST00000497993 ACYP1P07311 99 aa3.08□□□□□ -1.92
TMEM39A-212ENST00000497993 ETDBQ3ZM63 59 aa3.08□□□□□ -1.92
TMEM39A-212ENST00000497993 TRBV7-7A0A0K0K1E9 115 aa3.06□□□□□ -1.92
TMEM39A-212ENST00000497993 IGFL1Q6UW32 110 aa3.06□□□□□ -1.92
TMEM39A-212ENST00000497993 KRTAP4-1Q9BYQ7 146 aa3.06□□□□□ -1.92
TMEM39A-212ENST00000497993 ORMDL1Q9P0S3 153 aa3.06□□□□□ -1.92
TMEM39A-212ENST00000497993 F8WEM9 126 aa3.05□□□□□ -1.92
TMEM39A-212ENST00000497993 KRTAP19-2Q3LHN2 52 aa3.05□□□□□ -1.92
TMEM39A-212ENST00000497993 DEFB105AQ8NG35 78 aa3.05□□□□□ -1.92
TMEM39A-212ENST00000497993 FLGP20930 4061 aaPredicted RBP3.03□□□□□ -1.92
TMEM39A-212ENST00000497993 A0A0G2JQZ4 141 aa3.03□□□□□ -1.92
TMEM39A-212ENST00000497993 MIR22HGQ0VDD5 57 aa3.03□□□□□ -1.92
TMEM39A-212ENST00000497993 RPL37P61927 97 aaKnown RBP3.02□□□□□ -1.93
TMEM39A-212ENST00000497993 DSCR8Q96T75 97 aa3.02□□□□□ -1.93
TMEM39A-212ENST00000497993 MT-ATP8P03928 68 aa3.01□□□□□ -1.93
TMEM39A-212ENST00000497993 Q96NJ1 140 aa3.01□□□□□ -1.93
TMEM39A-212ENST00000497993 RBM3P98179 157 aaKnown RBP3□□□□□ -1.93
TMEM39A-212ENST00000497993 Q1T7F1 81 aa3□□□□□ -1.93
TMEM39A-212ENST00000497993 TRBV7-4A0A0J9YYF1 115 aa2.99□□□□□ -1.93
TMEM39A-212ENST00000497993 PCOTHQ58A44 107 aa2.98□□□□□ -1.93
TMEM39A-212ENST00000497993 ATP5EP2Q5VTU8 51 aa2.98□□□□□ -1.93
TMEM39A-212ENST00000497993 UBL5Q9BZL1 73 aa2.98□□□□□ -1.93
TMEM39A-212ENST00000497993 C9orf92A6NGG3 77 aa2.97□□□□□ -1.93
TMEM39A-212ENST00000497993 P0C880 135 aa2.97□□□□□ -1.93
TMEM39A-212ENST00000497993 LOC110117498A0A087WWA1 95 aa2.96□□□□□ -1.94
TMEM39A-212ENST00000497993 COX7CP15954 63 aa2.96□□□□□ -1.94
TMEM39A-212ENST00000497993 LINC00643Q86TS7 51 aa2.96□□□□□ -1.94
TMEM39A-212ENST00000497993 MT1HP80294 61 aa2.95□□□□□ -1.94
TMEM39A-212ENST00000497993 OBSCN-AS1Q96MR7 158 aa2.95□□□□□ -1.94
TMEM39A-212ENST00000497993 LINC00472Q9H8W2 130 aa2.95□□□□□ -1.94
TMEM39A-212ENST00000497993 CCKP06307 115 aa2.94□□□□□ -1.94
TMEM39A-212ENST00000497993 ATP5EP56381 51 aaPredicted RBP2.94□□□□□ -1.94
TMEM39A-212ENST00000497993 ATOX1O00244 68 aa2.91□□□□□ -1.94
TMEM39A-212ENST00000497993 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
TMEM39A-212ENST00000497993 NREPQ16612 68 aa2.9□□□□□ -1.95
TMEM39A-212ENST00000497993 NDUFB1O75438 58 aa2.89□□□□□ -1.95
TMEM39A-212ENST00000497993 IGKV4-1P06312 121 aa2.88□□□□□ -1.95
TMEM39A-212ENST00000497993 KRTAP12-2P59991 146 aa2.87□□□□□ -1.95
TMEM39A-212ENST00000497993 SERP2Q8N6R1 65 aa2.86□□□□□ -1.95
TMEM39A-212ENST00000497993 DMAC1Q96GE9 116 aa2.86□□□□□ -1.95
TMEM39A-212ENST00000497993 CSAG1Q6PB30 78 aa2.84□□□□□ -1.95
TMEM39A-212ENST00000497993 COX6B2Q6YFQ2 88 aa2.84□□□□□ -1.95
TMEM39A-212ENST00000497993 COA5Q86WW8 74 aa2.84□□□□□ -1.95
TMEM39A-212ENST00000497993 IGKV3D-7A0A0C4DH55 119 aa2.83□□□□□ -1.96
TMEM39A-212ENST00000497993 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
TMEM39A-212ENST00000497993 SPTSSBQ8NFR3 76 aa2.83□□□□□ -1.96
TMEM39A-212ENST00000497993 ZCCHC13Q8WW36 166 aaKnown RBP2.83□□□□□ -1.96
TMEM39A-212ENST00000497993 CDC42SE1Q9NRR8 79 aa2.83□□□□□ -1.96
TMEM39A-212ENST00000497993 LINC00846Q9NV44 126 aa2.83□□□□□ -1.96
TMEM39A-212ENST00000497993 MMP24-AS1A0A0U1RRL7 71 aa2.81□□□□□ -1.96
TMEM39A-212ENST00000497993 NDUFC1O43677 76 aa2.81□□□□□ -1.96
TMEM39A-212ENST00000497993 CYP4F30PQ9H0H9 118 aa2.81□□□□□ -1.96
TMEM39A-212ENST00000497993 TP53AIP1Q9HCN2 124 aa2.81□□□□□ -1.96
TMEM39A-212ENST00000497993 HCG22E2RYF7 251 aa2.79□□□□□ -1.96
TMEM39A-212ENST00000497993 CRCT1Q9UGL9 99 aa2.79□□□□□ -1.96
TMEM39A-212ENST00000497993 FSIP2Q5CZC0 6907 aa2.78□□□□□ -1.96
TMEM39A-212ENST00000497993 M0R2T5 61 aa2.78□□□□□ -1.96
TMEM39A-212ENST00000497993 KLKP1Q107X0 134 aa2.78□□□□□ -1.96
TMEM39A-212ENST00000497993 MRPL34Q9BQ48 92 aaKnown RBP2.78□□□□□ -1.96
TMEM39A-212ENST00000497993 K7EQZ3 153 aa2.77□□□□□ -1.97
TMEM39A-212ENST00000497993 SPINK7P58062 85 aa2.77□□□□□ -1.97
TMEM39A-212ENST00000497993 INE1O15225 51 aa2.76□□□□□ -1.97
TMEM39A-212ENST00000497993 WFDC13Q8IUB5 93 aa2.76□□□□□ -1.97
TMEM39A-212ENST00000497993 A0A087WVE0 104 aa2.75□□□□□ -1.97
TMEM39A-212ENST00000497993 SPRR5A0A1B0GTR4 108 aa2.75□□□□□ -1.97
TMEM39A-212ENST00000497993 H7BZZ5 65 aa2.75□□□□□ -1.97
TMEM39A-212ENST00000497993 MT2AP02795 61 aa2.75□□□□□ -1.97
TMEM39A-212ENST00000497993 SNURFQ9Y675 71 aa2.75□□□□□ -1.97
TMEM39A-212ENST00000497993 C20orf197Q8N268 126 aa2.74□□□□□ -1.97
TMEM39A-212ENST00000497993 CYSTM1Q9H1C7 97 aa2.74□□□□□ -1.97
TMEM39A-212ENST00000497993 MT1FP04733 61 aa2.73□□□□□ -1.97
TMEM39A-212ENST00000497993 USH2AO75445 5202 aa2.72□□□□□ -1.97
TMEM39A-212ENST00000497993 SSPOA2VEC9 5147 aa2.69□□□□□ -1.98
TMEM39A-212ENST00000497993 TRAV22A0A0B4J277 110 aa2.69□□□□□ -1.98
TMEM39A-212ENST00000497993 LOC101927531A0A1B0GV80 90 aa2.69□□□□□ -1.98
TMEM39A-212ENST00000497993 H1FX-AS1Q4G0G2 97 aa2.69□□□□□ -1.98
TMEM39A-212ENST00000497993 KRTAP5-4Q6L8H1 288 aa2.69□□□□□ -1.98
TMEM39A-212ENST00000497993 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
TMEM39A-212ENST00000497993 KRTAP10-10P60014 251 aa2.66□□□□□ -1.98
TMEM39A-212ENST00000497993 H0Y9P7 68 aa2.65□□□□□ -1.99
TMEM39A-212ENST00000497993 FCGBPQ9Y6R7 5405 aaPredicted RBP2.64□□□□□ -1.99
TMEM39A-212ENST00000497993 KRTAP19-6Q3LI70 58 aa2.64□□□□□ -1.99
TMEM39A-212ENST00000497993 LCE3AQ5TA76 89 aa2.64□□□□□ -1.99
TMEM39A-212ENST00000497993 LINC00208Q96KT6 92 aa2.63□□□□□ -1.99
TMEM39A-212ENST00000497993 CHKB-CPT1BH3BT56 60 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms