RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 KAAG1Q9UBP8 84 aa-0.62□□□□□ -2.51
PSPC1-205ENST00000497722 RABAC1Q9UI14 185 aa-0.62□□□□□ -2.51
PSPC1-205ENST00000497722 LRRIQ1Q96JM4 1722 aa-0.62□□□□□ -2.51
PSPC1-205ENST00000497722 UNC80Q8N2C7 3258 aa-0.62□□□□□ -2.51
PSPC1-205ENST00000497722 CEP250Q9BV73 2442 aa-0.63□□□□□ -2.51
PSPC1-205ENST00000497722 EEA1Q15075 1411 aa-0.63□□□□□ -2.51
PSPC1-205ENST00000497722 KIF21BO75037 1637 aa-0.63□□□□□ -2.51
PSPC1-205ENST00000497722 FRYLO94915 3013 aa-0.63□□□□□ -2.51
PSPC1-205ENST00000497722 NRAPQ86VF7 1730 aa-0.63□□□□□ -2.51
PSPC1-205ENST00000497722 DNAH14Q0VDD8 3507 aa-0.63□□□□□ -2.51
PSPC1-205ENST00000497722 USP34Q70CQ2 3546 aa-0.63□□□□□ -2.51
PSPC1-205ENST00000497722 RPS27P42677 84 aaKnown RBP-0.63□□□□□ -2.51
PSPC1-205ENST00000497722 POLR2KP53803 58 aaKnown RBP-0.63□□□□□ -2.51
PSPC1-205ENST00000497722 SNRPFP62306 86 aaKnown RBP-0.63□□□□□ -2.51
PSPC1-205ENST00000497722 RPS27LQ71UM5 84 aaKnown RBP-0.63□□□□□ -2.51
PSPC1-205ENST00000497722 RRBP1Q9P2E9 1410 aaKnown RBP-0.64□□□□□ -2.51
PSPC1-205ENST00000497722 CLASP1Q7Z460 1538 aa-0.64□□□□□ -2.51
PSPC1-205ENST00000497722 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.64□□□□□ -2.51
PSPC1-205ENST00000497722 CROCC2H7BZ55 1655 aa-0.64□□□□□ -2.51
PSPC1-205ENST00000497722 CD163L1Q9NR16 1453 aa-0.64□□□□□ -2.51
PSPC1-205ENST00000497722 HTN1P15515 57 aa-0.64□□□□□ -2.51
PSPC1-205ENST00000497722 CD52P31358 61 aa-0.64□□□□□ -2.51
PSPC1-205ENST00000497722 IFI27P40305 119 aaPredicted RBP-0.64□□□□□ -2.51
PSPC1-205ENST00000497722 DEFB133Q30KQ1 61 aa-0.64□□□□□ -2.51
PSPC1-205ENST00000497722 LINC00643Q86TS7 51 aa-0.64□□□□□ -2.51
PSPC1-205ENST00000497722 PREX2Q70Z35 1606 aa-0.64□□□□□ -2.51
PSPC1-205ENST00000497722 NRXN3Q9Y4C0 1643 aa-0.64□□□□□ -2.51
PSPC1-205ENST00000497722 RALGAPBQ86X10 1494 aa-0.65□□□□□ -2.51
PSPC1-205ENST00000497722 DEFB131BA0A096LNP1 70 aa-0.65□□□□□ -2.51
PSPC1-205ENST00000497722 PVALEFA0A1B0GWK0 134 aa-0.65□□□□□ -2.51
PSPC1-205ENST00000497722 CEBPZOSA8MTT3 80 aa-0.65□□□□□ -2.51
PSPC1-205ENST00000497722 NDUFA4O00483 81 aa-0.65□□□□□ -2.51
PSPC1-205ENST00000497722 ATP5EP2Q5VTU8 51 aa-0.65□□□□□ -2.51
PSPC1-205ENST00000497722 WFDC10BQ8IUB3 73 aa-0.65□□□□□ -2.51
PSPC1-205ENST00000497722 V9GYS6 101 aa-0.65□□□□□ -2.51
PSPC1-205ENST00000497722 RICTORQ6R327 1708 aa-0.65□□□□□ -2.51
PSPC1-205ENST00000497722 KDM5DQ9BY66 1539 aa-0.65□□□□□ -2.51
PSPC1-205ENST00000497722 CFAP47Q6ZTR5 3102 aa-0.65□□□□□ -2.51
PSPC1-205ENST00000497722 VCANP13611 3396 aa-0.65□□□□□ -2.51
PSPC1-205ENST00000497722 MED14O60244 1454 aa-0.66□□□□□ -2.51
PSPC1-205ENST00000497722 TJP1Q07157 1748 aa-0.66□□□□□ -2.51
PSPC1-205ENST00000497722 MROH1Q8NDA8 1641 aa-0.66□□□□□ -2.51
PSPC1-205ENST00000497722 UMAD1C9J7I0 102 aa-0.66□□□□□ -2.52
PSPC1-205ENST00000497722 S100A16Q96FQ6 103 aaKnown RBP-0.66□□□□□ -2.52
PSPC1-205ENST00000497722 MYO5CQ9NQX4 1742 aa-0.67□□□□□ -2.52
PSPC1-205ENST00000497722 ARHGAP35Q9NRY4 1499 aa-0.67□□□□□ -2.52
PSPC1-205ENST00000497722 SMIM27A0A1W2PRY6 76 aa-0.67□□□□□ -2.52
PSPC1-205ENST00000497722 CRIP1P50238 77 aa-0.67□□□□□ -2.52
PSPC1-205ENST00000497722 KRTAP19-2Q3LHN2 52 aa-0.67□□□□□ -2.52
PSPC1-205ENST00000497722 UBL5Q9BZL1 73 aa-0.67□□□□□ -2.52
PSPC1-205ENST00000497722 C3P01024 1663 aa-0.68□□□□□ -2.52
PSPC1-205ENST00000497722 A0A096LNI7 61 aa-0.68□□□□□ -2.52
PSPC1-205ENST00000497722 DEFB104AQ8WTQ1 72 aa-0.68□□□□□ -2.52
PSPC1-205ENST00000497722 RHPN1-AS1Q9BWJ2 59 aa-0.68□□□□□ -2.52
PSPC1-205ENST00000497722 NMES1Q9C002 83 aa-0.68□□□□□ -2.52
PSPC1-205ENST00000497722 KCNQ1DNQ9H478 68 aa-0.68□□□□□ -2.52
PSPC1-205ENST00000497722 Q9H521 79 aa-0.68□□□□□ -2.52
PSPC1-205ENST00000497722 DIP2AQ14689 1571 aa-0.69□□□□□ -2.52
PSPC1-205ENST00000497722 NREPQ16612 68 aa-0.69□□□□□ -2.52
PSPC1-205ENST00000497722 SMIM2Q9BVW6 85 aa-0.69□□□□□ -2.52
PSPC1-205ENST00000497722 SCRIBQ14160 1630 aa-0.69□□□□□ -2.52
PSPC1-205ENST00000497722 CFAP74Q9C0B2 1584 aa-0.7□□□□□ -2.52
PSPC1-205ENST00000497722 ANKARQ7Z5J8 1434 aa-0.7□□□□□ -2.52
PSPC1-205ENST00000497722 CENPFP49454 3210 aa-0.7□□□□□ -2.52
PSPC1-205ENST00000497722 A0A087WXM4 84 aa-0.7□□□□□ -2.52
PSPC1-205ENST00000497722 ETDCA0A1B0GVM5 59 aa-0.7□□□□□ -2.52
PSPC1-205ENST00000497722 KANTRA0A1W2PQU2 76 aa-0.7□□□□□ -2.52
PSPC1-205ENST00000497722 LMO7Q8WWI1 1683 aa-0.7□□□□□ -2.52
PSPC1-205ENST00000497722 FAM208AQ9UK61 1670 aaKnown RBP-0.7□□□□□ -2.52
PSPC1-205ENST00000497722 DNAH12Q6ZR08 3092 aa-0.7□□□□□ -2.52
PSPC1-205ENST00000497722 ASPMQ8IZT6 3477 aa-0.7□□□□□ -2.52
PSPC1-205ENST00000497722 MADDQ8WXG6 1647 aa-0.71□□□□□ -2.52
PSPC1-205ENST00000497722 CCDC180Q9P1Z9 1646 aa-0.71□□□□□ -2.52
PSPC1-205ENST00000497722 CDH23Q9H251 3354 aa-0.71□□□□□ -2.52
PSPC1-205ENST00000497722 ABCC1P33527 1531 aa-0.71□□□□□ -2.52
PSPC1-205ENST00000497722 LMTK2Q8IWU2 1503 aa-0.71□□□□□ -2.52
PSPC1-205ENST00000497722 BRCA2P51587 3418 aa-0.71□□□□□ -2.52
PSPC1-205ENST00000497722 ABCC6O95255 1503 aa-0.72□□□□□ -2.52
PSPC1-205ENST00000497722 H3BUT2 72 aa-0.72□□□□□ -2.52
PSPC1-205ENST00000497722 DEFB131AP59861 70 aa-0.72□□□□□ -2.52
PSPC1-205ENST00000497722 DEFB114Q30KQ6 69 aa-0.72□□□□□ -2.52
PSPC1-205ENST00000497722 TDRG1Q3Y452 100 aa-0.72□□□□□ -2.52
PSPC1-205ENST00000497722 LINC01556Q5JQF7 62 aa-0.72□□□□□ -2.52
PSPC1-205ENST00000497722 ENHOQ6UWT2 76 aa-0.72□□□□□ -2.52
PSPC1-205ENST00000497722 GLI2P10070 1586 aa-0.72□□□□□ -2.52
PSPC1-205ENST00000497722 NFAT5O94916 1531 aa-0.73□□□□□ -2.53
PSPC1-205ENST00000497722 DCAF1Q9Y4B6 1507 aa-0.73□□□□□ -2.53
PSPC1-205ENST00000497722 RB1CC1Q8TDY2 1594 aa-0.73□□□□□ -2.53
PSPC1-205ENST00000497722 PDCD5O14737 125 aa-0.73□□□□□ -2.53
PSPC1-205ENST00000497722 LINC00308Q8TCZ7 52 aa-0.73□□□□□ -2.53
PSPC1-205ENST00000497722 TMEM167BQ9NRX6 74 aa-0.73□□□□□ -2.53
PSPC1-205ENST00000497722 TOMM7Q9P0U1 55 aa-0.73□□□□□ -2.53
PSPC1-205ENST00000497722 H3BVH4 76 aa-0.74□□□□□ -2.53
PSPC1-205ENST00000497722 SMIM13P0DJ93 91 aa-0.74□□□□□ -2.53
PSPC1-205ENST00000497722 VPS13AQ96RL7 3174 aa-0.74□□□□□ -2.53
PSPC1-205ENST00000497722 EFCAB6Q5THR3 1501 aa-0.74□□□□□ -2.53
PSPC1-205ENST00000497722 TIAM1Q13009 1591 aa-0.74□□□□□ -2.53
PSPC1-205ENST00000497722 DEFB121Q5J5C9 76 aa-0.75□□□□□ -2.53
PSPC1-205ENST00000497722 LINC01590Q5TEZ4 76 aa-0.75□□□□□ -2.53
PSPC1-205ENST00000497722 S100ZQ8WXG8 99 aa-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms