RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 FAM236AA0A1B0GUQ0 79 aa8.53□□□□□ -1.04
RPN1-208ENST00000497415 FAM236BA0A1B0GV22 79 aa8.53□□□□□ -1.04
RPN1-208ENST00000497415 KRTAP9-7A8MTY7 169 aa8.53□□□□□ -1.04
RPN1-208ENST00000497415 IMUPQ9GZP8 106 aa8.51□□□□□ -1.05
RPN1-208ENST00000497415 OCR1Q9BZK8 76 aa8.46□□□□□ -1.06
RPN1-208ENST00000497415 SPRR2GQ9BYE4 73 aa8.44□□□□□ -1.06
RPN1-208ENST00000497415 LINC00208Q96KT6 92 aa8.43□□□□□ -1.06
RPN1-208ENST00000497415 KLKP1Q107X0 134 aa8.42□□□□□ -1.06
RPN1-208ENST00000497415 SCGB1A1P11684 91 aa8.41□□□□□ -1.06
RPN1-208ENST00000497415 A8MUN3 132 aa8.39□□□□□ -1.07
RPN1-208ENST00000497415 MT-ATP8P03928 68 aa8.39□□□□□ -1.07
RPN1-208ENST00000497415 MP68P56378 58 aa8.39□□□□□ -1.07
RPN1-208ENST00000497415 KRTAP19-8Q3LI54 63 aa8.38□□□□□ -1.07
RPN1-208ENST00000497415 MT1BP07438 61 aa8.37□□□□□ -1.07
RPN1-208ENST00000497415 NDUFC1O43677 76 aa8.35□□□□□ -1.07
RPN1-208ENST00000497415 MACF1Q9UPN3 7388 aaKnown RBP8.35□□□□□ -1.07
RPN1-208ENST00000497415 Q5VV11 94 aa8.34□□□□□ -1.07
RPN1-208ENST00000497415 SMIM20Q8N5G0 67 aa8.32□□□□□ -1.08
RPN1-208ENST00000497415 H0YAA0 97 aa8.31□□□□□ -1.08
RPN1-208ENST00000497415 H3BPC8 53 aa8.31□□□□□ -1.08
RPN1-208ENST00000497415 CRIPTQ9P021 101 aa8.31□□□□□ -1.08
RPN1-208ENST00000497415 SYNE2Q8WXH0 6885 aaKnown RBP8.26□□□□□ -1.09
RPN1-208ENST00000497415 TRAV7A0A075B6U4 112 aa8.22□□□□□ -1.09
RPN1-208ENST00000497415 A6NN06 94 aa8.21□□□□□ -1.1
RPN1-208ENST00000497415 ADM2Q7Z4H4 148 aa8.18□□□□□ -1.1
RPN1-208ENST00000497415 DMAC1Q96GE9 116 aa8.18□□□□□ -1.1
RPN1-208ENST00000497415 KRTAP10-5P60370 271 aa8.16□□□□□ -1.1
RPN1-208ENST00000497415 KRTAP6-3Q3LI67 103 aa8.15□□□□□ -1.1
RPN1-208ENST00000497415 SERP2Q8N6R1 65 aa8.08□□□□□ -1.12
RPN1-208ENST00000497415 P0C880 135 aa8.02□□□□□ -1.13
RPN1-208ENST00000497415 KRTAP4-8Q9BYQ9 185 aa8□□□□□ -1.13
RPN1-208ENST00000497415 C20orf197Q8N268 126 aa7.99□□□□□ -1.13
RPN1-208ENST00000497415 ACYP2P14621 99 aa7.98□□□□□ -1.13
RPN1-208ENST00000497415 R4GN34 69 aa7.96□□□□□ -1.14
RPN1-208ENST00000497415 SNURFQ9Y675 71 aa7.95□□□□□ -1.14
RPN1-208ENST00000497415 COX7CP15954 63 aa7.92□□□□□ -1.14
RPN1-208ENST00000497415 M0QZ58 72 aa7.89□□□□□ -1.15
RPN1-208ENST00000497415 SPANXA2-OT1Q8N9U9 137 aa7.89□□□□□ -1.15
RPN1-208ENST00000497415 PLAC4Q8WY50 150 aa7.89□□□□□ -1.15
RPN1-208ENST00000497415 MT1XP80297 61 aa7.86□□□□□ -1.15
RPN1-208ENST00000497415 SPTSSBQ8NFR3 76 aa7.86□□□□□ -1.15
RPN1-208ENST00000497415 PRO2289Q9P1D8 64 aa7.85□□□□□ -1.15
RPN1-208ENST00000497415 ANAPC13Q9BS18 74 aa7.82□□□□□ -1.16
RPN1-208ENST00000497415 KRTAP5-9P26371 169 aa7.81□□□□□ -1.16
RPN1-208ENST00000497415 CHKB-CPT1BH3BT56 60 aa7.8□□□□□ -1.16
RPN1-208ENST00000497415 NEBP20929 6669 aa7.77□□□□□ -1.17
RPN1-208ENST00000497415 LINC01554Q52M75 96 aa7.75□□□□□ -1.17
RPN1-208ENST00000497415 MUC12Q9UKN1 5478 aa7.74□□□□□ -1.17
RPN1-208ENST00000497415 H7BZZ5 65 aa7.69□□□□□ -1.18
RPN1-208ENST00000497415 KRTAP12-2P59991 146 aa7.68□□□□□ -1.18
RPN1-208ENST00000497415 KRTAP4-12Q9BQ66 201 aa7.68□□□□□ -1.18
RPN1-208ENST00000497415 KMT2DO14686 5537 aa7.65□□□□□ -1.18
RPN1-208ENST00000497415 CYSTM1Q9H1C7 97 aa7.62□□□□□ -1.19
RPN1-208ENST00000497415 CCDC179H3BU77 68 aa7.59□□□□□ -1.19
RPN1-208ENST00000497415 LCE3BQ5TA77 95 aa7.58□□□□□ -1.2
RPN1-208ENST00000497415 COA5Q86WW8 74 aa7.57□□□□□ -1.2
RPN1-208ENST00000497415 MDN1Q9NU22 5596 aa7.56□□□□□ -1.2
RPN1-208ENST00000497415 KRTAP8-1Q8IUC2 63 aa7.55□□□□□ -1.2
RPN1-208ENST00000497415 SPRR2FQ96RM1 72 aa7.54□□□□□ -1.2
RPN1-208ENST00000497415 KRTAP13-4Q3LI77 160 aa7.52□□□□□ -1.21
RPN1-208ENST00000497415 ATP5EP56381 51 aaPredicted RBP7.5□□□□□ -1.21
RPN1-208ENST00000497415 KRTAP4-8A0A0G2JLE6 195 aa7.49□□□□□ -1.21
RPN1-208ENST00000497415 KRTAP10-7P60409 375 aaPredicted RBP7.49□□□□□ -1.21
RPN1-208ENST00000497415 KRTAP10-12P60413 245 aa7.48□□□□□ -1.21
RPN1-208ENST00000497415 KRTAP9-9Q9BYP9 154 aa7.48□□□□□ -1.21
RPN1-208ENST00000497415 KRTAP9-4Q9BYQ2 154 aa7.48□□□□□ -1.21
RPN1-208ENST00000497415 KRTAP20-1Q3LI63 56 aa7.47□□□□□ -1.21
RPN1-208ENST00000497415 SPRR2EP22531 72 aa7.42□□□□□ -1.22
RPN1-208ENST00000497415 SPRR2BP35325 72 aa7.42□□□□□ -1.22
RPN1-208ENST00000497415 SPRR2AP35326 72 aa7.42□□□□□ -1.22
RPN1-208ENST00000497415 SEC61GP60059 68 aa7.42□□□□□ -1.22
RPN1-208ENST00000497415 TMEM258P61165 79 aa7.41□□□□□ -1.22
RPN1-208ENST00000497415 SERP1Q9Y6X1 66 aa7.39□□□□□ -1.23
RPN1-208ENST00000497415 LCE1AQ5T7P2 110 aa7.36□□□□□ -1.23
RPN1-208ENST00000497415 KRTAP2-3P0C7H8 128 aa7.32□□□□□ -1.24
RPN1-208ENST00000497415 KRTAP2-4Q9BYR9 128 aa7.32□□□□□ -1.24
RPN1-208ENST00000497415 CAMK2N1Q7Z7J9 78 aa7.31□□□□□ -1.24
RPN1-208ENST00000497415 A0A1B0GU33 70 aa7.28□□□□□ -1.24
RPN1-208ENST00000497415 SPATA8Q6RVD6 105 aa7.27□□□□□ -1.25
RPN1-208ENST00000497415 A0A0D9SG42 100 aa7.25□□□□□ -1.25
RPN1-208ENST00000497415 A0A1B0GU69 56 aa7.23□□□□□ -1.25
RPN1-208ENST00000497415 SPRR2DP22532 72 aa7.17□□□□□ -1.26
RPN1-208ENST00000497415 PRR15LQ9BU68 103 aa7.17□□□□□ -1.26
RPN1-208ENST00000497415 KRTAP12-1P59990 96 aa7.16□□□□□ -1.26
RPN1-208ENST00000497415 SPINT4Q6UDR6 99 aa7.15□□□□□ -1.26
RPN1-208ENST00000497415 LINC01558Q9Y6Z2 57 aa7.14□□□□□ -1.27
RPN1-208ENST00000497415 PCP4P48539 62 aa7.13□□□□□ -1.27
RPN1-208ENST00000497415 LCE1DQ5T752 114 aa7.12□□□□□ -1.27
RPN1-208ENST00000497415 KRTAP2-2Q9BYT5 123 aa7.09□□□□□ -1.27
RPN1-208ENST00000497415 KRTAP2-1Q9BYU5 128 aa7.09□□□□□ -1.27
RPN1-208ENST00000497415 SMIM26A0A096LP01 95 aa7.08□□□□□ -1.28
RPN1-208ENST00000497415 KRTAP4-7Q9BYR0 210 aa7.08□□□□□ -1.28
RPN1-208ENST00000497415 KRTAP19-7Q3SYF9 63 aa7.03□□□□□ -1.28
RPN1-208ENST00000497415 V9GYY9 64 aa7.02□□□□□ -1.29
RPN1-208ENST00000497415 A8MU10 97 aa7.01□□□□□ -1.29
RPN1-208ENST00000497415 MT1EP04732 61 aa6.96□□□□□ -1.3
RPN1-208ENST00000497415 RPS28P62857 69 aaKnown RBP6.94□□□□□ -1.3
RPN1-208ENST00000497415 Q1T7F1 81 aa6.93□□□□□ -1.3
RPN1-208ENST00000497415 KRTAP4-9Q9BYQ8 210 aa6.93□□□□□ -1.3
RPN1-208ENST00000497415 UQCR11O14957 56 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms