RNA–Protein interactions for RNA: ENST00000497091.1

PBX3-211, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 425 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-211ENST00000497091 FAM236BA0A1B0GV22 79 aa9.01□□□□□ -0.97
PBX3-211ENST00000497091 SMIM20Q8N5G0 67 aa9□□□□□ -0.97
PBX3-211ENST00000497091 KRTAP9-3Q9BYQ3 159 aa8.98□□□□□ -0.97
PBX3-211ENST00000497091 TRAV7A0A075B6U4 112 aa8.97□□□□□ -0.97
PBX3-211ENST00000497091 A8MUN3 132 aa8.95□□□□□ -0.98
PBX3-211ENST00000497091 LOC100996750A0A140TA64 210 aa8.94□□□□□ -0.98
PBX3-211ENST00000497091 KRTAP4-6Q9BYQ5 205 aa8.94□□□□□ -0.98
PBX3-211ENST00000497091 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.9□□□□□ -0.98
PBX3-211ENST00000497091 USH2AO75445 5202 aa8.9□□□□□ -0.98
PBX3-211ENST00000497091 KRTAP9-7A8MTY7 169 aa8.89□□□□□ -0.99
PBX3-211ENST00000497091 SSPOA2VEC9 5147 aa8.87□□□□□ -0.99
PBX3-211ENST00000497091 NDUFC1O43677 76 aa8.86□□□□□ -0.99
PBX3-211ENST00000497091 SERP2Q8N6R1 65 aa8.78□□□□□ -1
PBX3-211ENST00000497091 DMAC1Q96GE9 116 aa8.78□□□□□ -1
PBX3-211ENST00000497091 SNURFQ9Y675 71 aa8.75□□□□□ -1.01
PBX3-211ENST00000497091 FCGBPQ9Y6R7 5405 aaPredicted RBP8.75□□□□□ -1.01
PBX3-211ENST00000497091 C20orf197Q8N268 126 aa8.7□□□□□ -1.02
PBX3-211ENST00000497091 ACYP2P14621 99 aa8.68□□□□□ -1.02
PBX3-211ENST00000497091 KRTAP19-1Q8IUB9 90 aa8.67□□□□□ -1.02
PBX3-211ENST00000497091 H0YAA0 97 aa8.66□□□□□ -1.02
PBX3-211ENST00000497091 ADM2Q7Z4H4 148 aa8.6□□□□□ -1.03
PBX3-211ENST00000497091 CRIPTQ9P021 101 aa8.6□□□□□ -1.03
PBX3-211ENST00000497091 SPRR2GQ9BYE4 73 aa8.59□□□□□ -1.03
PBX3-211ENST00000497091 COX7CP15954 63 aa8.58□□□□□ -1.04
PBX3-211ENST00000497091 SPANXA2-OT1Q8N9U9 137 aa8.58□□□□□ -1.04
PBX3-211ENST00000497091 MACF1Q9UPN3 7388 aaKnown RBP8.55□□□□□ -1.04
PBX3-211ENST00000497091 CHKB-CPT1BH3BT56 60 aa8.52□□□□□ -1.05
PBX3-211ENST00000497091 SPTSSBQ8NFR3 76 aa8.52□□□□□ -1.05
PBX3-211ENST00000497091 KRTAP19-6Q3LI70 58 aa8.5□□□□□ -1.05
PBX3-211ENST00000497091 KRTAP19-8Q3LI54 63 aa8.48□□□□□ -1.05
PBX3-211ENST00000497091 Q5VV11 94 aa8.48□□□□□ -1.05
PBX3-211ENST00000497091 SYNE2Q8WXH0 6885 aaKnown RBP8.48□□□□□ -1.05
PBX3-211ENST00000497091 ANAPC13Q9BS18 74 aa8.45□□□□□ -1.06
PBX3-211ENST00000497091 MT1BP07438 61 aa8.43□□□□□ -1.06
PBX3-211ENST00000497091 P0C880 135 aa8.42□□□□□ -1.06
PBX3-211ENST00000497091 H7BZZ5 65 aa8.37□□□□□ -1.07
PBX3-211ENST00000497091 CYSTM1Q9H1C7 97 aa8.36□□□□□ -1.07
PBX3-211ENST00000497091 R4GN34 69 aa8.36□□□□□ -1.07
PBX3-211ENST00000497091 COA5Q86WW8 74 aa8.32□□□□□ -1.08
PBX3-211ENST00000497091 M0QZ58 72 aa8.3□□□□□ -1.08
PBX3-211ENST00000497091 A6NN06 94 aa8.26□□□□□ -1.09
PBX3-211ENST00000497091 CCDC179H3BU77 68 aa8.26□□□□□ -1.09
PBX3-211ENST00000497091 KRTAP6-3Q3LI67 103 aa8.26□□□□□ -1.09
PBX3-211ENST00000497091 KRTAP4-8Q9BYQ9 185 aa8.24□□□□□ -1.09
PBX3-211ENST00000497091 KRTAP10-5P60370 271 aa8.19□□□□□ -1.1
PBX3-211ENST00000497091 PLAC4Q8WY50 150 aa8.19□□□□□ -1.1
PBX3-211ENST00000497091 LINC01554Q52M75 96 aa8.18□□□□□ -1.1
PBX3-211ENST00000497091 SEC61GP60059 68 aa8.12□□□□□ -1.11
PBX3-211ENST00000497091 SERP1Q9Y6X1 66 aa8.09□□□□□ -1.11
PBX3-211ENST00000497091 ATP5EP56381 51 aaPredicted RBP8.06□□□□□ -1.12
PBX3-211ENST00000497091 PRO2289Q9P1D8 64 aa8.04□□□□□ -1.12
PBX3-211ENST00000497091 NEBP20929 6669 aa7.99□□□□□ -1.13
PBX3-211ENST00000497091 MT1XP80297 61 aa7.98□□□□□ -1.13
PBX3-211ENST00000497091 KRTAP13-4Q3LI77 160 aa7.97□□□□□ -1.13
PBX3-211ENST00000497091 TMEM258P61165 79 aa7.96□□□□□ -1.14
PBX3-211ENST00000497091 KRTAP4-12Q9BQ66 201 aa7.93□□□□□ -1.14
PBX3-211ENST00000497091 A0A1B0GU33 70 aa7.92□□□□□ -1.14
PBX3-211ENST00000497091 A0A1B0GU69 56 aa7.92□□□□□ -1.14
PBX3-211ENST00000497091 MUC12Q9UKN1 5478 aa7.9□□□□□ -1.14
PBX3-211ENST00000497091 SPATA8Q6RVD6 105 aa7.85□□□□□ -1.15
PBX3-211ENST00000497091 A0A0D9SG42 100 aa7.81□□□□□ -1.16
PBX3-211ENST00000497091 LCE3BQ5TA77 95 aa7.81□□□□□ -1.16
PBX3-211ENST00000497091 PRR15LQ9BU68 103 aa7.78□□□□□ -1.16
PBX3-211ENST00000497091 KRTAP5-9P26371 169 aa7.76□□□□□ -1.17
PBX3-211ENST00000497091 KRTAP20-1Q3LI63 56 aa7.76□□□□□ -1.17
PBX3-211ENST00000497091 CAMK2N1Q7Z7J9 78 aa7.75□□□□□ -1.17
PBX3-211ENST00000497091 LINC01558Q9Y6Z2 57 aa7.75□□□□□ -1.17
PBX3-211ENST00000497091 KRTAP12-2P59991 146 aa7.73□□□□□ -1.17
PBX3-211ENST00000497091 SMIM26A0A096LP01 95 aa7.71□□□□□ -1.18
PBX3-211ENST00000497091 KRTAP9-9Q9BYP9 154 aa7.7□□□□□ -1.18
PBX3-211ENST00000497091 KRTAP9-4Q9BYQ2 154 aa7.7□□□□□ -1.18
PBX3-211ENST00000497091 SPINT4Q6UDR6 99 aa7.69□□□□□ -1.18
PBX3-211ENST00000497091 KMT2DO14686 5537 aa7.67□□□□□ -1.18
PBX3-211ENST00000497091 MDN1Q9NU22 5596 aa7.67□□□□□ -1.18
PBX3-211ENST00000497091 KRTAP12-1P59990 96 aa7.64□□□□□ -1.19
PBX3-211ENST00000497091 KRTAP10-7P60409 375 aaPredicted RBP7.63□□□□□ -1.19
PBX3-211ENST00000497091 A8MU10 97 aa7.61□□□□□ -1.19
PBX3-211ENST00000497091 KRTAP10-12P60413 245 aa7.59□□□□□ -1.19
PBX3-211ENST00000497091 KRTAP8-1Q8IUC2 63 aa7.58□□□□□ -1.2
PBX3-211ENST00000497091 KRTAP4-8A0A0G2JLE6 195 aa7.56□□□□□ -1.2
PBX3-211ENST00000497091 PCP4P48539 62 aa7.56□□□□□ -1.2
PBX3-211ENST00000497091 UQCR11O14957 56 aa7.53□□□□□ -1.2
PBX3-211ENST00000497091 KRTAP2-3P0C7H8 128 aa7.52□□□□□ -1.21
PBX3-211ENST00000497091 KRTAP2-4Q9BYR9 128 aa7.52□□□□□ -1.21
PBX3-211ENST00000497091 V9GYY9 64 aa7.52□□□□□ -1.21
PBX3-211ENST00000497091 SPRR2FQ96RM1 72 aa7.5□□□□□ -1.21
PBX3-211ENST00000497091 Q1T7F1 81 aa7.45□□□□□ -1.22
PBX3-211ENST00000497091 PSPHP1O15172 72 aa7.41□□□□□ -1.22
PBX3-211ENST00000497091 MIR22HGQ0VDD5 57 aa7.38□□□□□ -1.23
PBX3-211ENST00000497091 SPRR2EP22531 72 aa7.37□□□□□ -1.23
PBX3-211ENST00000497091 SPRR2BP35325 72 aa7.37□□□□□ -1.23
PBX3-211ENST00000497091 SPRR2AP35326 72 aa7.37□□□□□ -1.23
PBX3-211ENST00000497091 RPS28P62857 69 aaKnown RBP7.37□□□□□ -1.23
PBX3-211ENST00000497091 LCE1DQ5T752 114 aa7.33□□□□□ -1.24
PBX3-211ENST00000497091 KRTAP4-7Q9BYR0 210 aa7.27□□□□□ -1.25
PBX3-211ENST00000497091 C10orf95Q9H7T3 257 aa7.27□□□□□ -1.25
PBX3-211ENST00000497091 LCE1AQ5T7P2 110 aa7.26□□□□□ -1.25
PBX3-211ENST00000497091 KRTAP2-2Q9BYT5 123 aa7.26□□□□□ -1.25
PBX3-211ENST00000497091 KRTAP2-1Q9BYU5 128 aa7.26□□□□□ -1.25
PBX3-211ENST00000497091 TNP1P09430 55 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms