RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 TNXBP22105 4242 aa0.24□□□□□ -2.37
SSR3-208ENST00000496050 ANK3Q12955 4377 aaKnown RBP0.23□□□□□ -2.37
SSR3-208ENST00000496050 LOC730098B7Z3J9 87 aa0.23□□□□□ -2.37
SSR3-208ENST00000496050 SPRR2DP22532 72 aa0.23□□□□□ -2.37
SSR3-208ENST00000496050 KRTAP19-6Q3LI70 58 aa0.23□□□□□ -2.37
SSR3-208ENST00000496050 GLI2P10070 1586 aa0.23□□□□□ -2.37
SSR3-208ENST00000496050 TIAM1Q13009 1591 aa0.23□□□□□ -2.37
SSR3-208ENST00000496050 PKHD1L1Q86WI1 4243 aa0.22□□□□□ -2.37
SSR3-208ENST00000496050 IAPPP10997 89 aa0.22□□□□□ -2.37
SSR3-208ENST00000496050 PLECQ15149 4684 aaKnown RBP0.22□□□□□ -2.37
SSR3-208ENST00000496050 FAT2Q9NYQ8 4349 aa0.22□□□□□ -2.37
SSR3-208ENST00000496050 DNAH6Q9C0G6 4158 aa0.21□□□□□ -2.38
SSR3-208ENST00000496050 C3P01024 1663 aa0.21□□□□□ -2.38
SSR3-208ENST00000496050 SERF2P84101 59 aa0.21□□□□□ -2.38
SSR3-208ENST00000496050 DEFB135Q30KP9 77 aa0.21□□□□□ -2.38
SSR3-208ENST00000496050 NMES1Q9C002 83 aa0.21□□□□□ -2.38
SSR3-208ENST00000496050 ABCA10Q8WWZ4 1543 aa0.21□□□□□ -2.38
SSR3-208ENST00000496050 VPS13BQ7Z7G8 4022 aa0.21□□□□□ -2.38
SSR3-208ENST00000496050 ALS2Q96Q42 1657 aa0.21□□□□□ -2.38
SSR3-208ENST00000496050 APOBP04114 4563 aaKnown RBP0.2□□□□□ -2.38
SSR3-208ENST00000496050 IGIPA6NJ69 53 aa0.2□□□□□ -2.38
SSR3-208ENST00000496050 MAST1Q9Y2H9 1570 aa0.19□□□□□ -2.38
SSR3-208ENST00000496050 KIAA0586Q9BVV6 1533 aa0.19□□□□□ -2.38
SSR3-208ENST00000496050 NCBP2-AS2Q69YL0 99 aa0.19□□□□□ -2.38
SSR3-208ENST00000496050 EEA1Q15075 1411 aa0.19□□□□□ -2.38
SSR3-208ENST00000496050 LY75O60449 1722 aa0.18□□□□□ -2.38
SSR3-208ENST00000496050 DNAH5Q8TE73 4624 aa0.18□□□□□ -2.38
SSR3-208ENST00000496050 PRXQ9BXM0 1461 aa0.18□□□□□ -2.38
SSR3-208ENST00000496050 M0R1W7 72 aa0.18□□□□□ -2.38
SSR3-208ENST00000496050 MINOS1Q5TGZ0 78 aa0.18□□□□□ -2.38
SSR3-208ENST00000496050 HUWE1Q7Z6Z7 4374 aaKnown RBP0.18□□□□□ -2.38
SSR3-208ENST00000496050 CPS1P31327 1500 aa0.18□□□□□ -2.38
SSR3-208ENST00000496050 FAT1Q14517 4588 aa0.18□□□□□ -2.38
SSR3-208ENST00000496050 FCER1GP30273 86 aa0.17□□□□□ -2.38
SSR3-208ENST00000496050 SPRR2BP35325 72 aa0.17□□□□□ -2.38
SSR3-208ENST00000496050 RPS27P42677 84 aaKnown RBP0.17□□□□□ -2.38
SSR3-208ENST00000496050 MT4P47944 62 aa0.17□□□□□ -2.38
SSR3-208ENST00000496050 RPS27LQ71UM5 84 aaKnown RBP0.17□□□□□ -2.38
SSR3-208ENST00000496050 DNAH3Q8TD57 4116 aa0.17□□□□□ -2.38
SSR3-208ENST00000496050 PREX2Q70Z35 1606 aa0.16□□□□□ -2.38
SSR3-208ENST00000496050 PRLHP81277 87 aa0.16□□□□□ -2.38
SSR3-208ENST00000496050 WT1-ASQ06250 92 aa0.16□□□□□ -2.38
SSR3-208ENST00000496050 CLASP1Q7Z460 1538 aa0.16□□□□□ -2.38
SSR3-208ENST00000496050 MUC17Q685J3 4493 aa0.15□□□□□ -2.38
SSR3-208ENST00000496050 FLGP20930 4061 aaPredicted RBP0.15□□□□□ -2.39
SSR3-208ENST00000496050 H0YGG7 62 aa0.15□□□□□ -2.39
SSR3-208ENST00000496050 C6orf48Q9UBA6 75 aa0.15□□□□□ -2.39
SSR3-208ENST00000496050 S4R3F8 94 aa0.15□□□□□ -2.39
SSR3-208ENST00000496050 KIF1AQ12756 1690 aa0.14□□□□□ -2.39
SSR3-208ENST00000496050 SPRR2EP22531 72 aa0.14□□□□□ -2.39
SSR3-208ENST00000496050 SPRR2AP35326 72 aa0.14□□□□□ -2.39
SSR3-208ENST00000496050 ITSN2Q9NZM3 1697 aa0.14□□□□□ -2.39
SSR3-208ENST00000496050 LPAP08519 4548 aa0.13□□□□□ -2.39
SSR3-208ENST00000496050 UGGT1Q9NYU2 1555 aa0.13□□□□□ -2.39
SSR3-208ENST00000496050 DNAH10Q8IVF4 4471 aa0.13□□□□□ -2.39
SSR3-208ENST00000496050 H0YGX0 51 aa0.12□□□□□ -2.39
SSR3-208ENST00000496050 DNAH17Q9UFH2 4485 aa0.12□□□□□ -2.39
SSR3-208ENST00000496050 TMEM167BQ9NRX6 74 aa0.11□□□□□ -2.39
SSR3-208ENST00000496050 ADCY10Q96PN6 1610 aa0.11□□□□□ -2.39
SSR3-208ENST00000496050 AGLP35573 1532 aa0.11□□□□□ -2.39
SSR3-208ENST00000496050 EFCAB6Q5THR3 1501 aa0.11□□□□□ -2.39
SSR3-208ENST00000496050 CROCC2H7BZ55 1655 aa0.11□□□□□ -2.39
SSR3-208ENST00000496050 H3BUA1 57 aa0.1□□□□□ -2.39
SSR3-208ENST00000496050 SYCP2Q9BX26 1530 aa0.09□□□□□ -2.39
SSR3-208ENST00000496050 C9orf92A6NGG3 77 aa0.09□□□□□ -2.4
SSR3-208ENST00000496050 DEFB106AQ8N104 65 aa0.09□□□□□ -2.4
SSR3-208ENST00000496050 LINC00308Q8TCZ7 52 aa0.09□□□□□ -2.4
SSR3-208ENST00000496050 FANCD2Q9BXW9 1451 aa0.09□□□□□ -2.4
SSR3-208ENST00000496050 MROH2AA6NES4 1674 aa0.08□□□□□ -2.4
SSR3-208ENST00000496050 DNAH2Q9P225 4427 aa0.08□□□□□ -2.4
SSR3-208ENST00000496050 PLNP26678 52 aa0.08□□□□□ -2.4
SSR3-208ENST00000496050 SPRR2GQ9BYE4 73 aa0.08□□□□□ -2.4
SSR3-208ENST00000496050 SNRPGP15A8MWD9 76 aa0.07□□□□□ -2.4
SSR3-208ENST00000496050 CMC2Q9NRP2 79 aa0.07□□□□□ -2.4
SSR3-208ENST00000496050 TIMM8BQ9Y5J9 83 aaPredicted RBP0.07□□□□□ -2.4
SSR3-208ENST00000496050 IGLV5-48A0A075B6I7 105 aa0.06□□□□□ -2.4
SSR3-208ENST00000496050 KRTAP6-2Q3LI66 62 aa0.06□□□□□ -2.4
SSR3-208ENST00000496050 CDC42BPAQ5VT25 1732 aa0.06□□□□□ -2.4
SSR3-208ENST00000496050 TOGARAM1Q9Y4F4 1720 aa0.05□□□□□ -2.4
SSR3-208ENST00000496050 LINC01546A6NGU7 62 aa0.04□□□□□ -2.4
SSR3-208ENST00000496050 MT1AP04731 61 aa0.04□□□□□ -2.4
SSR3-208ENST00000496050 DNAH11Q96DT5 4516 aa0.04□□□□□ -2.4
SSR3-208ENST00000496050 ABCC8Q09428 1581 aa0.03□□□□□ -2.4
SSR3-208ENST00000496050 DNAH8Q96JB1 4490 aa0.03□□□□□ -2.4
SSR3-208ENST00000496050 H3BNG1 76 aa0.03□□□□□ -2.4
SSR3-208ENST00000496050 KRTAP20-2Q3LI61 65 aa0.03□□□□□ -2.4
SSR3-208ENST00000496050 ANKRD36CQ5JPF3 1778 aa0.03□□□□□ -2.4
SSR3-208ENST00000496050 VPS13DQ5THJ4 4388 aa0.03□□□□□ -2.41
SSR3-208ENST00000496050 NOP10Q9NPE3 64 aaKnown RBP0.02□□□□□ -2.41
SSR3-208ENST00000496050 SMIM27A0A1W2PRY6 76 aa0.01□□□□□ -2.41
SSR3-208ENST00000496050 ABCA5Q8WWZ7 1642 aa0.01□□□□□ -2.41
SSR3-208ENST00000496050 SPRR2FQ96RM1 72 aa0□□□□□ -2.41
SSR3-208ENST00000496050 ABRACLQ9P1F3 81 aa0□□□□□ -2.41
SSR3-208ENST00000496050 NRXN3Q9Y4C0 1643 aa0□□□□□ -2.41
SSR3-208ENST00000496050 MMP24-AS1A0A0U1RRL7 71 aa-0.01□□□□□ -2.41
SSR3-208ENST00000496050 KIF21BO75037 1637 aa-0.02□□□□□ -2.41
SSR3-208ENST00000496050 KAAG1Q9UBP8 84 aa-0.02□□□□□ -2.41
SSR3-208ENST00000496050 LMO7Q8WWI1 1683 aa-0.03□□□□□ -2.41
SSR3-208ENST00000496050 A8MTW9 85 aa-0.04□□□□□ -2.42
SSR3-208ENST00000496050 WFDC10BQ8IUB3 73 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms