RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 NDUFC1O43677 76 aa9.47□□□□□ -0.89
ATG3-208ENST00000495756 S4R3F8 94 aa9.47□□□□□ -0.89
ATG3-208ENST00000495756 SPANXA2-OT1Q8N9U9 137 aa9.46□□□□□ -0.9
ATG3-208ENST00000495756 H7BZZ5 65 aa9.43□□□□□ -0.9
ATG3-208ENST00000495756 LCA10Q71F78 164 aa9.42□□□□□ -0.9
ATG3-208ENST00000495756 KRTAP9-2Q9BYQ4 174 aa9.4□□□□□ -0.91
ATG3-208ENST00000495756 KRTAP10-6P60371 365 aaPredicted RBP9.39□□□□□ -0.91
ATG3-208ENST00000495756 ACYP2P14621 99 aa9.36□□□□□ -0.91
ATG3-208ENST00000495756 LORP23490 312 aaPredicted RBP9.36□□□□□ -0.91
ATG3-208ENST00000495756 CSAG1Q6PB30 78 aa9.32□□□□□ -0.92
ATG3-208ENST00000495756 KRTAP9-8Q9BYQ0 159 aa9.25□□□□□ -0.93
ATG3-208ENST00000495756 TMEM258P61165 79 aa9.21□□□□□ -0.93
ATG3-208ENST00000495756 CHKB-CPT1BH3BT56 60 aa9.2□□□□□ -0.94
ATG3-208ENST00000495756 MT2AP02795 61 aa9.19□□□□□ -0.94
ATG3-208ENST00000495756 ATP5EP56381 51 aaPredicted RBP9.16□□□□□ -0.94
ATG3-208ENST00000495756 COA5Q86WW8 74 aa9.16□□□□□ -0.94
ATG3-208ENST00000495756 MT1FP04733 61 aa9.12□□□□□ -0.95
ATG3-208ENST00000495756 SPTSSBQ8NFR3 76 aa9.12□□□□□ -0.95
ATG3-208ENST00000495756 KRTAP9-6A0A140TA67 174 aa9.11□□□□□ -0.95
ATG3-208ENST00000495756 RPS28P62857 69 aaKnown RBP9.1□□□□□ -0.95
ATG3-208ENST00000495756 KRTAP10-10P60014 251 aa9.09□□□□□ -0.95
ATG3-208ENST00000495756 H0YAA0 97 aa9.05□□□□□ -0.96
ATG3-208ENST00000495756 FSIP2Q5CZC0 6907 aa9.02□□□□□ -0.96
ATG3-208ENST00000495756 ADM2Q7Z4H4 148 aa8.98□□□□□ -0.97
ATG3-208ENST00000495756 KRTAP9-3Q9BYQ3 159 aa8.94□□□□□ -0.98
ATG3-208ENST00000495756 SERP1Q9Y6X1 66 aa8.93□□□□□ -0.98
ATG3-208ENST00000495756 CRCT1Q9UGL9 99 aa8.89□□□□□ -0.99
ATG3-208ENST00000495756 P0C880 135 aa8.88□□□□□ -0.99
ATG3-208ENST00000495756 CRIPTQ9P021 101 aa8.83□□□□□ -1
ATG3-208ENST00000495756 KRTAP19-1Q8IUB9 90 aa8.78□□□□□ -1
ATG3-208ENST00000495756 SPRR2GQ9BYE4 73 aa8.77□□□□□ -1.01
ATG3-208ENST00000495756 SEC61GP60059 68 aa8.76□□□□□ -1.01
ATG3-208ENST00000495756 SMIM26A0A096LP01 95 aa8.74□□□□□ -1.01
ATG3-208ENST00000495756 USH2AO75445 5202 aa8.72□□□□□ -1.01
ATG3-208ENST00000495756 R4GN34 69 aa8.7□□□□□ -1.02
ATG3-208ENST00000495756 A0A1B0GU69 56 aa8.68□□□□□ -1.02
ATG3-208ENST00000495756 M0QZ58 72 aa8.67□□□□□ -1.02
ATG3-208ENST00000495756 LOC100996750A0A140TA64 210 aa8.66□□□□□ -1.02
ATG3-208ENST00000495756 KRTAP4-6Q9BYQ5 205 aa8.66□□□□□ -1.02
ATG3-208ENST00000495756 LINC01558Q9Y6Z2 57 aa8.65□□□□□ -1.02
ATG3-208ENST00000495756 KRTAP19-8Q3LI54 63 aa8.61□□□□□ -1.03
ATG3-208ENST00000495756 PRR15LQ9BU68 103 aa8.59□□□□□ -1.03
ATG3-208ENST00000495756 A0A1B0GU33 70 aa8.57□□□□□ -1.04
ATG3-208ENST00000495756 Q5VV11 94 aa8.55□□□□□ -1.04
ATG3-208ENST00000495756 MT1BP07438 61 aa8.53□□□□□ -1.04
ATG3-208ENST00000495756 KRTAP13-4Q3LI77 160 aa8.53□□□□□ -1.04
ATG3-208ENST00000495756 V9GYY9 64 aa8.53□□□□□ -1.04
ATG3-208ENST00000495756 SSPOA2VEC9 5147 aa8.53□□□□□ -1.04
ATG3-208ENST00000495756 Q1T7F1 81 aa8.52□□□□□ -1.05
ATG3-208ENST00000495756 LINC01554Q52M75 96 aa8.51□□□□□ -1.05
ATG3-208ENST00000495756 SPATA8Q6RVD6 105 aa8.45□□□□□ -1.06
ATG3-208ENST00000495756 PSPHP1O15172 72 aa8.4□□□□□ -1.06
ATG3-208ENST00000495756 PLAC4Q8WY50 150 aa8.37□□□□□ -1.07
ATG3-208ENST00000495756 A6NN06 94 aa8.36□□□□□ -1.07
ATG3-208ENST00000495756 A0A0D9SG42 100 aa8.34□□□□□ -1.07
ATG3-208ENST00000495756 KRTAP19-6Q3LI70 58 aa8.34□□□□□ -1.07
ATG3-208ENST00000495756 UQCR11O14957 56 aa8.32□□□□□ -1.08
ATG3-208ENST00000495756 FCGBPQ9Y6R7 5405 aaPredicted RBP8.29□□□□□ -1.08
ATG3-208ENST00000495756 A8MU10 97 aa8.26□□□□□ -1.09
ATG3-208ENST00000495756 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.25□□□□□ -1.09
ATG3-208ENST00000495756 SVIPQ8NHG7 77 aa8.24□□□□□ -1.09
ATG3-208ENST00000495756 KRTAP9-7A8MTY7 169 aa8.19□□□□□ -1.1
ATG3-208ENST00000495756 KRTAP10-5P60370 271 aa8.19□□□□□ -1.1
ATG3-208ENST00000495756 MIR22HGQ0VDD5 57 aa8.19□□□□□ -1.1
ATG3-208ENST00000495756 KRTAP12-1P59990 96 aa8.19□□□□□ -1.1
ATG3-208ENST00000495756 PRO0628Q9UI54 55 aa8.19□□□□□ -1.1
ATG3-208ENST00000495756 SPINT4Q6UDR6 99 aa8.17□□□□□ -1.1
ATG3-208ENST00000495756 A6NED7 52 aa8.15□□□□□ -1.1
ATG3-208ENST00000495756 MT1XP80297 61 aa8.15□□□□□ -1.1
ATG3-208ENST00000495756 KRTAP12-2P59991 146 aa8.14□□□□□ -1.11
ATG3-208ENST00000495756 BRK1Q8WUW1 75 aa8.13□□□□□ -1.11
ATG3-208ENST00000495756 PRO2289Q9P1D8 64 aa8.13□□□□□ -1.11
ATG3-208ENST00000495756 CAMK2N1Q7Z7J9 78 aa8.1□□□□□ -1.11
ATG3-208ENST00000495756 MACF1Q9UPN3 7388 aaKnown RBP8.1□□□□□ -1.11
ATG3-208ENST00000495756 SYNE2Q8WXH0 6885 aaKnown RBP8.07□□□□□ -1.12
ATG3-208ENST00000495756 CDC42SE1Q9NRR8 79 aa7.97□□□□□ -1.13
ATG3-208ENST00000495756 K7ERS5 55 aa7.91□□□□□ -1.14
ATG3-208ENST00000495756 KRTAP4-8Q9BYQ9 185 aa7.87□□□□□ -1.15
ATG3-208ENST00000495756 KRTAP10-7P60409 375 aaPredicted RBP7.79□□□□□ -1.16
ATG3-208ENST00000495756 C10orf95Q9H7T3 257 aa7.78□□□□□ -1.16
ATG3-208ENST00000495756 KRTAP10-12P60413 245 aa7.74□□□□□ -1.17
ATG3-208ENST00000495756 PMAIP1Q13794 54 aa7.73□□□□□ -1.17
ATG3-208ENST00000495756 KRTAP6-3Q3LI67 103 aa7.71□□□□□ -1.18
ATG3-208ENST00000495756 KMT2DO14686 5537 aa7.7□□□□□ -1.18
ATG3-208ENST00000495756 TNP1P09430 55 aa7.62□□□□□ -1.19
ATG3-208ENST00000495756 KRTAP4-8A0A0G2JLE6 195 aa7.61□□□□□ -1.19
ATG3-208ENST00000495756 NEBP20929 6669 aa7.53□□□□□ -1.2
ATG3-208ENST00000495756 KRTAP8-1Q8IUC2 63 aa7.53□□□□□ -1.2
ATG3-208ENST00000495756 KTN1-AS1Q86SY8 53 aa7.52□□□□□ -1.21
ATG3-208ENST00000495756 ROMO1P60602 79 aa7.51□□□□□ -1.21
ATG3-208ENST00000495756 KRTAP25-1Q3LHN0 102 aa7.5□□□□□ -1.21
ATG3-208ENST00000495756 LCE3BQ5TA77 95 aa7.45□□□□□ -1.22
ATG3-208ENST00000495756 KRTAP4-12Q9BQ66 201 aa7.45□□□□□ -1.22
ATG3-208ENST00000495756 MUC12Q9UKN1 5478 aa7.45□□□□□ -1.22
ATG3-208ENST00000495756 KRTAP5-9P26371 169 aa7.44□□□□□ -1.22
ATG3-208ENST00000495756 LCE3AQ5TA76 89 aa7.39□□□□□ -1.23
ATG3-208ENST00000495756 SPRR2FQ96RM1 72 aa7.37□□□□□ -1.23
ATG3-208ENST00000495756 KRTAP9-9Q9BYP9 154 aa7.36□□□□□ -1.23
ATG3-208ENST00000495756 KRTAP9-4Q9BYQ2 154 aa7.36□□□□□ -1.23
ATG3-208ENST00000495756 KRTAP19-7Q3SYF9 63 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms