RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 COX6B2Q6YFQ2 88 aa6.83□□□□□ -1.32
PTPN7-217ENST00000495688 KRTAP21-3Q3LHN1 58 aa6.78□□□□□ -1.32
PTPN7-217ENST00000495688 A0A0A0MQY5 61 aa6.75□□□□□ -1.33
PTPN7-217ENST00000495688 RYR3Q15413 4870 aa6.75□□□□□ -1.33
PTPN7-217ENST00000495688 LPAP08519 4548 aa6.74□□□□□ -1.33
PTPN7-217ENST00000495688 KRTAP10-8P60410 259 aa6.72□□□□□ -1.33
PTPN7-217ENST00000495688 KRTAP3-3Q9BYR6 98 aa6.71□□□□□ -1.34
PTPN7-217ENST00000495688 RYR1P21817 5038 aa6.69□□□□□ -1.34
PTPN7-217ENST00000495688 Q5VSD8 79 aa6.68□□□□□ -1.34
PTPN7-217ENST00000495688 KIAA1109Q2LD37 5005 aa6.68□□□□□ -1.34
PTPN7-217ENST00000495688 RPL37P61927 97 aaKnown RBP6.67□□□□□ -1.34
PTPN7-217ENST00000495688 XP32Q5T750 250 aa6.67□□□□□ -1.34
PTPN7-217ENST00000495688 KRTAP17-1Q9BYP8 105 aa6.67□□□□□ -1.34
PTPN7-217ENST00000495688 KRTAP10-6P60371 365 aaPredicted RBP6.66□□□□□ -1.34
PTPN7-217ENST00000495688 CRIPTQ9P021 101 aa6.66□□□□□ -1.34
PTPN7-217ENST00000495688 KRTAP13-4Q3LI77 160 aa6.65□□□□□ -1.35
PTPN7-217ENST00000495688 LRP2P98164 4655 aa6.65□□□□□ -1.35
PTPN7-217ENST00000495688 KRTAP25-1Q3LHN0 102 aa6.63□□□□□ -1.35
PTPN7-217ENST00000495688 KRTAP3-2Q9BYR7 98 aa6.61□□□□□ -1.35
PTPN7-217ENST00000495688 A0A0D9SG42 100 aa6.61□□□□□ -1.35
PTPN7-217ENST00000495688 K7ERS5 55 aa6.59□□□□□ -1.35
PTPN7-217ENST00000495688 S4R3F8 94 aa6.59□□□□□ -1.35
PTPN7-217ENST00000495688 P0C880 135 aa6.56□□□□□ -1.36
PTPN7-217ENST00000495688 MT1HL1P0DM35 61 aa6.53□□□□□ -1.36
PTPN7-217ENST00000495688 ABCA13Q86UQ4 5058 aa6.5□□□□□ -1.37
PTPN7-217ENST00000495688 EPPK1P58107 5090 aaKnown RBP6.5□□□□□ -1.37
PTPN7-217ENST00000495688 ROMO1P60602 79 aa6.5□□□□□ -1.37
PTPN7-217ENST00000495688 KRTAP12-2P59991 146 aa6.42□□□□□ -1.38
PTPN7-217ENST00000495688 TPRXLQ17RH7 258 aa6.39□□□□□ -1.39
PTPN7-217ENST00000495688 C10orf95Q9H7T3 257 aa6.39□□□□□ -1.39
PTPN7-217ENST00000495688 SPINT4Q6UDR6 99 aa6.35□□□□□ -1.39
PTPN7-217ENST00000495688 KRTAP12-1P59990 96 aa6.34□□□□□ -1.39
PTPN7-217ENST00000495688 MUC17Q685J3 4493 aa6.28□□□□□ -1.4
PTPN7-217ENST00000495688 KRTAP4-5Q9BYR2 181 aa6.28□□□□□ -1.4
PTPN7-217ENST00000495688 M0QZ58 72 aa6.23□□□□□ -1.41
PTPN7-217ENST00000495688 NDUFAF8A1L188 74 aa6.19□□□□□ -1.42
PTPN7-217ENST00000495688 MUC2Q02817 5179 aa6.19□□□□□ -1.42
PTPN7-217ENST00000495688 LORP23490 312 aaPredicted RBP6.14□□□□□ -1.43
PTPN7-217ENST00000495688 KRTAP4-1Q9BYQ7 146 aa6.14□□□□□ -1.43
PTPN7-217ENST00000495688 R4GN34 69 aa6.14□□□□□ -1.43
PTPN7-217ENST00000495688 HERC2O95714 4834 aa6.14□□□□□ -1.43
PTPN7-217ENST00000495688 SEC61BP60468 96 aaKnown RBP6.08□□□□□ -1.44
PTPN7-217ENST00000495688 KRTAP15-1Q3LI76 137 aa6.06□□□□□ -1.44
PTPN7-217ENST00000495688 KRTAP19-2Q3LHN2 52 aa6□□□□□ -1.45
PTPN7-217ENST00000495688 LUZP6Q538Z0 58 aa6□□□□□ -1.45
PTPN7-217ENST00000495688 J3QL48 77 aa5.99□□□□□ -1.45
PTPN7-217ENST00000495688 HERC1Q15751 4861 aa5.94□□□□□ -1.46
PTPN7-217ENST00000495688 FLGP20930 4061 aaPredicted RBP5.92□□□□□ -1.46
PTPN7-217ENST00000495688 PCLOQ9Y6V0 5065 aa5.92□□□□□ -1.46
PTPN7-217ENST00000495688 BIRC6Q9NR09 4857 aa5.9□□□□□ -1.46
PTPN7-217ENST00000495688 FAT4Q6V0I7 4981 aa5.89□□□□□ -1.47
PTPN7-217ENST00000495688 CAMK2N1Q7Z7J9 78 aa5.84□□□□□ -1.47
PTPN7-217ENST00000495688 PLAC4Q8WY50 150 aa5.79□□□□□ -1.48
PTPN7-217ENST00000495688 HMCN2Q8NDA2 5059 aa5.78□□□□□ -1.48
PTPN7-217ENST00000495688 RNF213Q63HN8 5207 aa5.68□□□□□ -1.5
PTPN7-217ENST00000495688 PP632Q6XCG6 107 aa5.66□□□□□ -1.5
PTPN7-217ENST00000495688 LCE2CQ5TA81 110 aa5.62□□□□□ -1.51
PTPN7-217ENST00000495688 UBR4Q5T4S7 5183 aa5.6□□□□□ -1.51
PTPN7-217ENST00000495688 TNP1P09430 55 aa5.59□□□□□ -1.51
PTPN7-217ENST00000495688 KRTAP19-1Q8IUB9 90 aa5.52□□□□□ -1.53
PTPN7-217ENST00000495688 SPRR2GQ9BYE4 73 aa5.51□□□□□ -1.53
PTPN7-217ENST00000495688 M0R2T5 61 aa5.5□□□□□ -1.53
PTPN7-217ENST00000495688 MT1HP80294 61 aa5.45□□□□□ -1.54
PTPN7-217ENST00000495688 KRTAP23-1A1A580 65 aa5.43□□□□□ -1.54
PTPN7-217ENST00000495688 MT1FP04733 61 aa5.41□□□□□ -1.54
PTPN7-217ENST00000495688 KRTAP10-10P60014 251 aa5.39□□□□□ -1.55
PTPN7-217ENST00000495688 MT2AP02795 61 aa5.39□□□□□ -1.55
PTPN7-217ENST00000495688 LCE3AQ5TA76 89 aa5.36□□□□□ -1.55
PTPN7-217ENST00000495688 SPRR5A0A1B0GTR4 108 aa5.35□□□□□ -1.55
PTPN7-217ENST00000495688 KRTAP9-8Q9BYQ0 159 aa5.34□□□□□ -1.55
PTPN7-217ENST00000495688 KRTAP19-8Q3LI54 63 aa5.23□□□□□ -1.57
PTPN7-217ENST00000495688 MT1BP07438 61 aa5.22□□□□□ -1.57
PTPN7-217ENST00000495688 KRTAP10-5P60370 271 aa5.21□□□□□ -1.57
PTPN7-217ENST00000495688 MT1XP80297 61 aa5.2□□□□□ -1.58
PTPN7-217ENST00000495688 KRTAP8-1Q8IUC2 63 aa5.16□□□□□ -1.58
PTPN7-217ENST00000495688 USH2AO75445 5202 aa5.12□□□□□ -1.59
PTPN7-217ENST00000495688 KRTAP10-7P60409 375 aaPredicted RBP5.1□□□□□ -1.59
PTPN7-217ENST00000495688 KRTAP9-3Q9BYQ3 159 aa5.1□□□□□ -1.59
PTPN7-217ENST00000495688 KRTAP10-12P60413 245 aa5.09□□□□□ -1.59
PTPN7-217ENST00000495688 PRO2289Q9P1D8 64 aa5.09□□□□□ -1.59
PTPN7-217ENST00000495688 KRTAP12-3P60328 96 aa5.07□□□□□ -1.6
PTPN7-217ENST00000495688 KMT2DO14686 5537 aa5.05□□□□□ -1.6
PTPN7-217ENST00000495688 LCE2BO14633 110 aa4.93□□□□□ -1.62
PTPN7-217ENST00000495688 KRTAP19-5Q3LI72 72 aa4.87□□□□□ -1.63
PTPN7-217ENST00000495688 KRTAP4-8A0A0G2JLE6 195 aa4.82□□□□□ -1.64
PTPN7-217ENST00000495688 KRTAP4-8Q9BYQ9 185 aa4.82□□□□□ -1.64
PTPN7-217ENST00000495688 LCE3CQ5T5A8 94 aa4.77□□□□□ -1.65
PTPN7-217ENST00000495688 INE1O15225 51 aa4.76□□□□□ -1.65
PTPN7-217ENST00000495688 LCE2AQ5TA79 106 aaPredicted RBP4.75□□□□□ -1.65
PTPN7-217ENST00000495688 KRTAP9-6A8MVA2 160 aa4.68□□□□□ -1.66
PTPN7-217ENST00000495688 FSIP2Q5CZC0 6907 aa4.68□□□□□ -1.66
PTPN7-217ENST00000495688 KRTAP4-7Q9BYR0 210 aa4.65□□□□□ -1.67
PTPN7-217ENST00000495688 KRTAP19-7Q3SYF9 63 aa4.64□□□□□ -1.67
PTPN7-217ENST00000495688 SSPOA2VEC9 5147 aa4.6□□□□□ -1.67
PTPN7-217ENST00000495688 MT1LQ93083 61 aa4.49□□□□□ -1.69
PTPN7-217ENST00000495688 MT1EP04732 61 aa4.48□□□□□ -1.69
PTPN7-217ENST00000495688 KRTAP2-3P0C7H8 128 aa4.44□□□□□ -1.7
PTPN7-217ENST00000495688 KRTAP2-4Q9BYR9 128 aa4.44□□□□□ -1.7
PTPN7-217ENST00000495688 KRTAP2-1Q9BYU5 128 aa4.44□□□□□ -1.7
PTPN7-217ENST00000495688 FCGBPQ9Y6R7 5405 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms