RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 KRTAP17-1Q9BYP8 105 aa8.15□□□□□ -1.1
CALD1-222ENST00000495522 KRTAP3-1Q9BYR8 98 aa8.15□□□□□ -1.1
CALD1-222ENST00000495522 ROMO1P60602 79 aa8.11□□□□□ -1.11
CALD1-222ENST00000495522 COX6B2Q6YFQ2 88 aa8.08□□□□□ -1.12
CALD1-222ENST00000495522 RPL37P61927 97 aaKnown RBP8.04□□□□□ -1.12
CALD1-222ENST00000495522 KRTAP25-1Q3LHN0 102 aa8.03□□□□□ -1.12
CALD1-222ENST00000495522 XP32Q5T750 250 aa8.01□□□□□ -1.13
CALD1-222ENST00000495522 BIRC6Q9NR09 4857 aa8□□□□□ -1.13
CALD1-222ENST00000495522 DMBT1Q9UGM3 2413 aaPredicted RBP7.97□□□□□ -1.13
CALD1-222ENST00000495522 MT1HL1P0DM35 61 aa7.97□□□□□ -1.13
CALD1-222ENST00000495522 KRTAP4-5Q9BYR2 181 aa7.97□□□□□ -1.13
CALD1-222ENST00000495522 A0A1B0GU33 70 aa7.93□□□□□ -1.14
CALD1-222ENST00000495522 MYCBP2O75592 4640 aa7.91□□□□□ -1.14
CALD1-222ENST00000495522 H0YAA0 97 aa7.91□□□□□ -1.14
CALD1-222ENST00000495522 H1FX-AS1Q4G0G2 97 aa7.9□□□□□ -1.14
CALD1-222ENST00000495522 HERC2O95714 4834 aa7.88□□□□□ -1.15
CALD1-222ENST00000495522 ABCA13Q86UQ4 5058 aa7.83□□□□□ -1.16
CALD1-222ENST00000495522 KRTAP3-3Q9BYR6 98 aa7.83□□□□□ -1.16
CALD1-222ENST00000495522 LCE2DQ5TA82 110 aaPredicted RBP7.81□□□□□ -1.16
CALD1-222ENST00000495522 S4R3F8 94 aa7.81□□□□□ -1.16
CALD1-222ENST00000495522 P0C880 135 aa7.81□□□□□ -1.16
CALD1-222ENST00000495522 TPRXLQ17RH7 258 aa7.78□□□□□ -1.16
CALD1-222ENST00000495522 KRTAP10-6P60371 365 aaPredicted RBP7.73□□□□□ -1.17
CALD1-222ENST00000495522 KRTAP3-2Q9BYR7 98 aa7.69□□□□□ -1.18
CALD1-222ENST00000495522 J3QL48 77 aa7.68□□□□□ -1.18
CALD1-222ENST00000495522 LRP2P98164 4655 aa7.67□□□□□ -1.18
CALD1-222ENST00000495522 K7ERS5 55 aa7.66□□□□□ -1.18
CALD1-222ENST00000495522 LPAP08519 4548 aa7.63□□□□□ -1.19
CALD1-222ENST00000495522 A0A0A0MQY5 61 aa7.63□□□□□ -1.19
CALD1-222ENST00000495522 PCLOQ9Y6V0 5065 aa7.62□□□□□ -1.19
CALD1-222ENST00000495522 KRTAP13-4Q3LI77 160 aa7.6□□□□□ -1.19
CALD1-222ENST00000495522 A0A0D9SG42 100 aa7.53□□□□□ -1.2
CALD1-222ENST00000495522 SPINT4Q6UDR6 99 aa7.53□□□□□ -1.2
CALD1-222ENST00000495522 SEC61BP60468 96 aaKnown RBP7.5□□□□□ -1.21
CALD1-222ENST00000495522 NDUFAF8A1L188 74 aa7.49□□□□□ -1.21
CALD1-222ENST00000495522 KRTAP15-1Q3LI76 137 aa7.49□□□□□ -1.21
CALD1-222ENST00000495522 CRIPTQ9P021 101 aa7.46□□□□□ -1.22
CALD1-222ENST00000495522 MUC17Q685J3 4493 aa7.41□□□□□ -1.22
CALD1-222ENST00000495522 HERC1Q15751 4861 aa7.4□□□□□ -1.23
CALD1-222ENST00000495522 M0QZ58 72 aa7.39□□□□□ -1.23
CALD1-222ENST00000495522 KRTAP12-2P59991 146 aa7.35□□□□□ -1.23
CALD1-222ENST00000495522 KRTAP4-1Q9BYQ7 146 aa7.34□□□□□ -1.23
CALD1-222ENST00000495522 KRTAP12-1P59990 96 aa7.33□□□□□ -1.24
CALD1-222ENST00000495522 HMCN2Q8NDA2 5059 aa7.28□□□□□ -1.24
CALD1-222ENST00000495522 R4GN34 69 aa7.23□□□□□ -1.25
CALD1-222ENST00000495522 KRTAP19-2Q3LHN2 52 aa7.22□□□□□ -1.25
CALD1-222ENST00000495522 LUZP6Q538Z0 58 aa7.21□□□□□ -1.26
CALD1-222ENST00000495522 C10orf95Q9H7T3 257 aa7.18□□□□□ -1.26
CALD1-222ENST00000495522 LORP23490 312 aaPredicted RBP7.13□□□□□ -1.27
CALD1-222ENST00000495522 FLGP20930 4061 aaPredicted RBP7.06□□□□□ -1.28
CALD1-222ENST00000495522 MUC2Q02817 5179 aa7□□□□□ -1.29
CALD1-222ENST00000495522 UBR4Q5T4S7 5183 aa6.96□□□□□ -1.29
CALD1-222ENST00000495522 RNF213Q63HN8 5207 aa6.9□□□□□ -1.31
CALD1-222ENST00000495522 CAMK2N1Q7Z7J9 78 aa6.84□□□□□ -1.31
CALD1-222ENST00000495522 LCE2CQ5TA81 110 aa6.84□□□□□ -1.32
CALD1-222ENST00000495522 PLAC4Q8WY50 150 aa6.79□□□□□ -1.32
CALD1-222ENST00000495522 FAT4Q6V0I7 4981 aa6.68□□□□□ -1.34
CALD1-222ENST00000495522 M0R2T5 61 aa6.68□□□□□ -1.34
CALD1-222ENST00000495522 PP632Q6XCG6 107 aa6.67□□□□□ -1.34
CALD1-222ENST00000495522 MT1HP80294 61 aa6.67□□□□□ -1.34
CALD1-222ENST00000495522 SPRR2GQ9BYE4 73 aa6.65□□□□□ -1.34
CALD1-222ENST00000495522 KRTAP19-1Q8IUB9 90 aa6.59□□□□□ -1.35
CALD1-222ENST00000495522 TNP1P09430 55 aa6.58□□□□□ -1.36
CALD1-222ENST00000495522 MT2AP02795 61 aa6.53□□□□□ -1.36
CALD1-222ENST00000495522 MT1FP04733 61 aa6.52□□□□□ -1.37
CALD1-222ENST00000495522 KRTAP10-10P60014 251 aa6.52□□□□□ -1.37
CALD1-222ENST00000495522 KRTAP23-1A1A580 65 aa6.5□□□□□ -1.37
CALD1-222ENST00000495522 KRTAP9-8Q9BYQ0 159 aa6.5□□□□□ -1.37
CALD1-222ENST00000495522 LCE2AQ5TA79 106 aaPredicted RBP6.4□□□□□ -1.38
CALD1-222ENST00000495522 PRO2289Q9P1D8 64 aa6.39□□□□□ -1.39
CALD1-222ENST00000495522 KRTAP19-8Q3LI54 63 aa6.38□□□□□ -1.39
CALD1-222ENST00000495522 SPRR5A0A1B0GTR4 108 aa6.31□□□□□ -1.4
CALD1-222ENST00000495522 MT1BP07438 61 aa6.28□□□□□ -1.4
CALD1-222ENST00000495522 LCE2BO14633 110 aa6.24□□□□□ -1.41
CALD1-222ENST00000495522 KRTAP9-3Q9BYQ3 159 aa6.23□□□□□ -1.41
CALD1-222ENST00000495522 LCE3AQ5TA76 89 aa6.23□□□□□ -1.41
CALD1-222ENST00000495522 KRTAP10-5P60370 271 aa6.21□□□□□ -1.42
CALD1-222ENST00000495522 MT1XP80297 61 aa6.2□□□□□ -1.42
CALD1-222ENST00000495522 INE1O15225 51 aa6.19□□□□□ -1.42
CALD1-222ENST00000495522 KRTAP8-1Q8IUC2 63 aa6.1□□□□□ -1.43
CALD1-222ENST00000495522 KRTAP10-12P60413 245 aa6.06□□□□□ -1.44
CALD1-222ENST00000495522 LOC100996750A0A140TA64 210 aa6.04□□□□□ -1.44
CALD1-222ENST00000495522 KRTAP4-6Q9BYQ5 205 aa6.04□□□□□ -1.44
CALD1-222ENST00000495522 KRTAP10-7P60409 375 aaPredicted RBP6□□□□□ -1.45
CALD1-222ENST00000495522 KRTAP12-3P60328 96 aa5.95□□□□□ -1.46
CALD1-222ENST00000495522 USH2AO75445 5202 aa5.84□□□□□ -1.47
CALD1-222ENST00000495522 KRTAP19-5Q3LI72 72 aa5.74□□□□□ -1.49
CALD1-222ENST00000495522 FSIP2Q5CZC0 6907 aa5.7□□□□□ -1.5
CALD1-222ENST00000495522 KRTAP9-2Q9BYQ4 174 aa5.69□□□□□ -1.5
CALD1-222ENST00000495522 SSPOA2VEC9 5147 aa5.68□□□□□ -1.5
CALD1-222ENST00000495522 KRTAP4-8A0A0G2JLE6 195 aa5.64□□□□□ -1.51
CALD1-222ENST00000495522 KRTAP4-8Q9BYQ9 185 aa5.64□□□□□ -1.51
CALD1-222ENST00000495522 KRTAP19-6Q3LI70 58 aa5.62□□□□□ -1.51
CALD1-222ENST00000495522 KMT2DO14686 5537 aa5.6□□□□□ -1.51
CALD1-222ENST00000495522 LCE3CQ5T5A8 94 aa5.59□□□□□ -1.51
CALD1-222ENST00000495522 KRTAP19-7Q3SYF9 63 aa5.52□□□□□ -1.53
CALD1-222ENST00000495522 CRCT1Q9UGL9 99 aa5.47□□□□□ -1.53
CALD1-222ENST00000495522 FCGBPQ9Y6R7 5405 aaPredicted RBP5.45□□□□□ -1.54
CALD1-222ENST00000495522 KRTAP19-4Q3LI73 84 aa5.42□□□□□ -1.54
CALD1-222ENST00000495522 MT1EP04732 61 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms