RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 C4orf26Q17RF5 130 aa4.05□□□□□ -1.76
TM4SF1-204ENST00000493348 H1FX-AS1Q4G0G2 97 aa4.05□□□□□ -1.76
TM4SF1-204ENST00000493348 IMUPQ9GZP8 106 aa4.05□□□□□ -1.76
TM4SF1-204ENST00000493348 KRTAP10-6P60371 365 aaPredicted RBP4.03□□□□□ -1.76
TM4SF1-204ENST00000493348 C5orf47Q569G3 176 aa4.02□□□□□ -1.77
TM4SF1-204ENST00000493348 C1orf64Q8NEQ6 169 aa4.02□□□□□ -1.77
TM4SF1-204ENST00000493348 CYP4F30PQ9H0H9 118 aa4.02□□□□□ -1.77
TM4SF1-204ENST00000493348 MT-ATP8P03928 68 aa4.01□□□□□ -1.77
TM4SF1-204ENST00000493348 SMIM20Q8N5G0 67 aa4.01□□□□□ -1.77
TM4SF1-204ENST00000493348 LINC00208Q96KT6 92 aa4.01□□□□□ -1.77
TM4SF1-204ENST00000493348 FAM236AA0A1B0GUQ0 79 aa3.99□□□□□ -1.77
TM4SF1-204ENST00000493348 FAM236BA0A1B0GV22 79 aa3.99□□□□□ -1.77
TM4SF1-204ENST00000493348 H3BPC8 53 aa3.99□□□□□ -1.77
TM4SF1-204ENST00000493348 KRTAP3-1Q9BYR8 98 aa3.99□□□□□ -1.77
TM4SF1-204ENST00000493348 OCR1Q9BZK8 76 aa3.99□□□□□ -1.77
TM4SF1-204ENST00000493348 S4R3F8 94 aa3.98□□□□□ -1.77
TM4SF1-204ENST00000493348 TRAV7A0A075B6U4 112 aa3.94□□□□□ -1.78
TM4SF1-204ENST00000493348 KRTAP23-1A1A580 65 aa3.93□□□□□ -1.78
TM4SF1-204ENST00000493348 A8MUN3 132 aa3.93□□□□□ -1.78
TM4SF1-204ENST00000493348 CSAG1Q6PB30 78 aa3.93□□□□□ -1.78
TM4SF1-204ENST00000493348 KRTAP10-10P60014 251 aa3.92□□□□□ -1.78
TM4SF1-204ENST00000493348 SVIPQ8NHG7 77 aa3.92□□□□□ -1.78
TM4SF1-204ENST00000493348 KLKP1Q107X0 134 aa3.91□□□□□ -1.78
TM4SF1-204ENST00000493348 LCA10Q71F78 164 aa3.9□□□□□ -1.79
TM4SF1-204ENST00000493348 NDUFC1O43677 76 aa3.89□□□□□ -1.79
TM4SF1-204ENST00000493348 MT2AP02795 61 aa3.88□□□□□ -1.79
TM4SF1-204ENST00000493348 SERP2Q8N6R1 65 aa3.87□□□□□ -1.79
TM4SF1-204ENST00000493348 MT1FP04733 61 aa3.84□□□□□ -1.79
TM4SF1-204ENST00000493348 C20orf197Q8N268 126 aa3.84□□□□□ -1.79
TM4SF1-204ENST00000493348 SNURFQ9Y675 71 aa3.84□□□□□ -1.79
TM4SF1-204ENST00000493348 ACYP2P14621 99 aa3.83□□□□□ -1.8
TM4SF1-204ENST00000493348 DMAC1Q96GE9 116 aa3.82□□□□□ -1.8
TM4SF1-204ENST00000493348 CHKB-CPT1BH3BT56 60 aa3.81□□□□□ -1.8
TM4SF1-204ENST00000493348 SPTSSBQ8NFR3 76 aa3.81□□□□□ -1.8
TM4SF1-204ENST00000493348 COX7CP15954 63 aa3.79□□□□□ -1.8
TM4SF1-204ENST00000493348 ANAPC13Q9BS18 74 aa3.78□□□□□ -1.8
TM4SF1-204ENST00000493348 CRCT1Q9UGL9 99 aa3.78□□□□□ -1.8
TM4SF1-204ENST00000493348 SPANXA2-OT1Q8N9U9 137 aa3.77□□□□□ -1.81
TM4SF1-204ENST00000493348 H0YAA0 97 aa3.74□□□□□ -1.81
TM4SF1-204ENST00000493348 ADM2Q7Z4H4 148 aa3.74□□□□□ -1.81
TM4SF1-204ENST00000493348 CRIPTQ9P021 101 aa3.74□□□□□ -1.81
TM4SF1-204ENST00000493348 USH2AO75445 5202 aa3.72□□□□□ -1.81
TM4SF1-204ENST00000493348 FSIP2Q5CZC0 6907 aa3.7□□□□□ -1.82
TM4SF1-204ENST00000493348 R4GN34 69 aa3.68□□□□□ -1.82
TM4SF1-204ENST00000493348 Q5VV11 94 aa3.67□□□□□ -1.82
TM4SF1-204ENST00000493348 COA5Q86WW8 74 aa3.66□□□□□ -1.82
TM4SF1-204ENST00000493348 H7BZZ5 65 aa3.65□□□□□ -1.83
TM4SF1-204ENST00000493348 SEC61GP60059 68 aa3.65□□□□□ -1.83
TM4SF1-204ENST00000493348 SPRR2GQ9BYE4 73 aa3.65□□□□□ -1.83
TM4SF1-204ENST00000493348 CCDC179H3BU77 68 aa3.64□□□□□ -1.83
TM4SF1-204ENST00000493348 M0QZ58 72 aa3.64□□□□□ -1.83
TM4SF1-204ENST00000493348 SSPOA2VEC9 5147 aa3.63□□□□□ -1.83
TM4SF1-204ENST00000493348 ATP5EP56381 51 aaPredicted RBP3.63□□□□□ -1.83
TM4SF1-204ENST00000493348 SERP1Q9Y6X1 66 aa3.62□□□□□ -1.83
TM4SF1-204ENST00000493348 P0C880 135 aa3.61□□□□□ -1.83
TM4SF1-204ENST00000493348 CYSTM1Q9H1C7 97 aa3.61□□□□□ -1.83
TM4SF1-204ENST00000493348 PLAC4Q8WY50 150 aa3.6□□□□□ -1.83
TM4SF1-204ENST00000493348 KRTAP19-8Q3LI54 63 aa3.59□□□□□ -1.83
TM4SF1-204ENST00000493348 LINC01554Q52M75 96 aa3.59□□□□□ -1.83
TM4SF1-204ENST00000493348 KRTAP19-6Q3LI70 58 aa3.58□□□□□ -1.84
TM4SF1-204ENST00000493348 KRTAP15-1Q3LI76 137 aa3.57□□□□□ -1.84
TM4SF1-204ENST00000493348 A6NN06 94 aa3.56□□□□□ -1.84
TM4SF1-204ENST00000493348 TMEM258P61165 79 aa3.56□□□□□ -1.84
TM4SF1-204ENST00000493348 FCGBPQ9Y6R7 5405 aaPredicted RBP3.54□□□□□ -1.84
TM4SF1-204ENST00000493348 MT1BP07438 61 aa3.54□□□□□ -1.84
TM4SF1-204ENST00000493348 PRO2289Q9P1D8 64 aa3.53□□□□□ -1.84
TM4SF1-204ENST00000493348 A0A1B0GU69 56 aa3.52□□□□□ -1.85
TM4SF1-204ENST00000493348 PRR15LQ9BU68 103 aa3.52□□□□□ -1.85
TM4SF1-204ENST00000493348 A0A1B0GU33 70 aa3.49□□□□□ -1.85
TM4SF1-204ENST00000493348 KRTAP10-5P60370 271 aa3.47□□□□□ -1.85
TM4SF1-204ENST00000493348 PCP4P48539 62 aa3.44□□□□□ -1.86
TM4SF1-204ENST00000493348 SMIM26A0A096LP01 95 aa3.43□□□□□ -1.86
TM4SF1-204ENST00000493348 A0A0D9SG42 100 aa3.43□□□□□ -1.86
TM4SF1-204ENST00000493348 CAMK2N1Q7Z7J9 78 aa3.43□□□□□ -1.86
TM4SF1-204ENST00000493348 SPATA8Q6RVD6 105 aa3.42□□□□□ -1.86
TM4SF1-204ENST00000493348 KRTAP13-4Q3LI77 160 aa3.41□□□□□ -1.86
TM4SF1-204ENST00000493348 LINC01558Q9Y6Z2 57 aa3.41□□□□□ -1.86
TM4SF1-204ENST00000493348 A0A0A0MQY5 61 aa3.4□□□□□ -1.87
TM4SF1-204ENST00000493348 SPINT4Q6UDR6 99 aa3.4□□□□□ -1.87
TM4SF1-204ENST00000493348 V9GYY9 64 aa3.39□□□□□ -1.87
TM4SF1-204ENST00000493348 MT1XP80297 61 aa3.38□□□□□ -1.87
TM4SF1-204ENST00000493348 UQCR11O14957 56 aa3.36□□□□□ -1.87
TM4SF1-204ENST00000493348 MACF1Q9UPN3 7388 aaKnown RBP3.33□□□□□ -1.88
TM4SF1-204ENST00000493348 KRTAP6-3Q3LI67 103 aa3.32□□□□□ -1.88
TM4SF1-204ENST00000493348 A8MU10 97 aa3.31□□□□□ -1.88
TM4SF1-204ENST00000493348 Q1T7F1 81 aa3.3□□□□□ -1.88
TM4SF1-204ENST00000493348 PSPHP1O15172 72 aa3.29□□□□□ -1.88
TM4SF1-204ENST00000493348 KRTAP12-1P59990 96 aa3.29□□□□□ -1.88
TM4SF1-204ENST00000493348 KRTAP12-2P59991 146 aa3.29□□□□□ -1.88
TM4SF1-204ENST00000493348 K7ERS5 55 aa3.28□□□□□ -1.88
TM4SF1-204ENST00000493348 MIR22HGQ0VDD5 57 aa3.28□□□□□ -1.88
TM4SF1-204ENST00000493348 SYNE2Q8WXH0 6885 aaKnown RBP3.28□□□□□ -1.88
TM4SF1-204ENST00000493348 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.27□□□□□ -1.89
TM4SF1-204ENST00000493348 KRTAP8-1Q8IUC2 63 aa3.27□□□□□ -1.89
TM4SF1-204ENST00000493348 RPS28P62857 69 aaKnown RBP3.26□□□□□ -1.89
TM4SF1-204ENST00000493348 KMT2DO14686 5537 aa3.25□□□□□ -1.89
TM4SF1-204ENST00000493348 A6NED7 52 aa3.24□□□□□ -1.89
TM4SF1-204ENST00000493348 KRTAP10-7P60409 375 aaPredicted RBP3.24□□□□□ -1.89
TM4SF1-204ENST00000493348 KRTAP10-12P60413 245 aa3.22□□□□□ -1.89
TM4SF1-204ENST00000493348 SPRR2FQ96RM1 72 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms