RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 COA5Q86WW8 74 aa10.78□□□□□ -0.68
PSPC1-204ENST00000492741 FAT4Q6V0I7 4981 aa10.77□□□□□ -0.69
PSPC1-204ENST00000492741 MT1HP80294 61 aa10.76□□□□□ -0.69
PSPC1-204ENST00000492741 FLGP20930 4061 aaPredicted RBP10.75□□□□□ -0.69
PSPC1-204ENST00000492741 M0R2T5 61 aa10.75□□□□□ -0.69
PSPC1-204ENST00000492741 KRTAP3-3Q9BYR6 98 aa10.69□□□□□ -0.7
PSPC1-204ENST00000492741 CSAG1Q6PB30 78 aa10.67□□□□□ -0.7
PSPC1-204ENST00000492741 SPTSSBQ8NFR3 76 aa10.66□□□□□ -0.7
PSPC1-204ENST00000492741 SERP1Q9Y6X1 66 aa10.63□□□□□ -0.71
PSPC1-204ENST00000492741 LCE2AQ5TA79 106 aaPredicted RBP10.54□□□□□ -0.72
PSPC1-204ENST00000492741 KRTAP10-6P60371 365 aaPredicted RBP10.42□□□□□ -0.74
PSPC1-204ENST00000492741 RPS28P62857 69 aaKnown RBP10.42□□□□□ -0.74
PSPC1-204ENST00000492741 LORP23490 312 aaPredicted RBP10.35□□□□□ -0.75
PSPC1-204ENST00000492741 ADM2Q7Z4H4 148 aa10.35□□□□□ -0.75
PSPC1-204ENST00000492741 H0YAA0 97 aa10.34□□□□□ -0.75
PSPC1-204ENST00000492741 SEC61GP60059 68 aa10.32□□□□□ -0.76
PSPC1-204ENST00000492741 SMIM26A0A096LP01 95 aa10.3□□□□□ -0.76
PSPC1-204ENST00000492741 KRTAP9-8Q9BYQ0 159 aa10.3□□□□□ -0.76
PSPC1-204ENST00000492741 MT2AP02795 61 aa10.24□□□□□ -0.77
PSPC1-204ENST00000492741 A0A1B0GU69 56 aa10.24□□□□□ -0.77
PSPC1-204ENST00000492741 LINC01558Q9Y6Z2 57 aa10.24□□□□□ -0.77
PSPC1-204ENST00000492741 KRTAP10-10P60014 251 aa10.23□□□□□ -0.77
PSPC1-204ENST00000492741 KRTAP3-2Q9BYR7 98 aa10.21□□□□□ -0.77
PSPC1-204ENST00000492741 P0C880 135 aa10.21□□□□□ -0.78
PSPC1-204ENST00000492741 V9GYY9 64 aa10.21□□□□□ -0.78
PSPC1-204ENST00000492741 MT1FP04733 61 aa10.18□□□□□ -0.78
PSPC1-204ENST00000492741 PRR15LQ9BU68 103 aa10.18□□□□□ -0.78
PSPC1-204ENST00000492741 Q1T7F1 81 aa10.16□□□□□ -0.78
PSPC1-204ENST00000492741 PSPHP1O15172 72 aa10.06□□□□□ -0.8
PSPC1-204ENST00000492741 CRIPTQ9P021 101 aa10.04□□□□□ -0.8
PSPC1-204ENST00000492741 R4GN34 69 aa10.03□□□□□ -0.8
PSPC1-204ENST00000492741 A0A1B0GU33 70 aa10.02□□□□□ -0.8
PSPC1-204ENST00000492741 M0QZ58 72 aa9.99□□□□□ -0.81
PSPC1-204ENST00000492741 KRTAP9-3Q9BYQ3 159 aa9.94□□□□□ -0.82
PSPC1-204ENST00000492741 Q5VV11 94 aa9.91□□□□□ -0.82
PSPC1-204ENST00000492741 SPATA8Q6RVD6 105 aa9.87□□□□□ -0.83
PSPC1-204ENST00000492741 SPRR2GQ9BYE4 73 aa9.87□□□□□ -0.83
PSPC1-204ENST00000492741 UQCR11O14957 56 aa9.86□□□□□ -0.83
PSPC1-204ENST00000492741 KRTAP13-4Q3LI77 160 aa9.86□□□□□ -0.83
PSPC1-204ENST00000492741 KRTAP19-1Q8IUB9 90 aa9.86□□□□□ -0.83
PSPC1-204ENST00000492741 LINC01554Q52M75 96 aa9.85□□□□□ -0.83
PSPC1-204ENST00000492741 A6NED7 52 aa9.77□□□□□ -0.85
PSPC1-204ENST00000492741 A0A0D9SG42 100 aa9.74□□□□□ -0.85
PSPC1-204ENST00000492741 LCE2DQ5TA82 110 aaPredicted RBP9.73□□□□□ -0.85
PSPC1-204ENST00000492741 LCE2BO14633 110 aa9.72□□□□□ -0.85
PSPC1-204ENST00000492741 MIR22HGQ0VDD5 57 aa9.72□□□□□ -0.85
PSPC1-204ENST00000492741 A8MU10 97 aa9.67□□□□□ -0.86
PSPC1-204ENST00000492741 KRTAP19-8Q3LI54 63 aa9.65□□□□□ -0.87
PSPC1-204ENST00000492741 PLAC4Q8WY50 150 aa9.57□□□□□ -0.88
PSPC1-204ENST00000492741 A6NN06 94 aa9.56□□□□□ -0.88
PSPC1-204ENST00000492741 KRTAP9-2Q9BYQ4 174 aa9.56□□□□□ -0.88
PSPC1-204ENST00000492741 MT1BP07438 61 aa9.55□□□□□ -0.88
PSPC1-204ENST00000492741 SPINT4Q6UDR6 99 aa9.55□□□□□ -0.88
PSPC1-204ENST00000492741 CDC42SE1Q9NRR8 79 aa9.49□□□□□ -0.89
PSPC1-204ENST00000492741 KRTAP12-1P59990 96 aa9.48□□□□□ -0.89
PSPC1-204ENST00000492741 KRTAP12-2P59991 146 aa9.45□□□□□ -0.9
PSPC1-204ENST00000492741 USH2AO75445 5202 aa9.43□□□□□ -0.9
PSPC1-204ENST00000492741 BRK1Q8WUW1 75 aa9.4□□□□□ -0.9
PSPC1-204ENST00000492741 K7ERS5 55 aa9.39□□□□□ -0.91
PSPC1-204ENST00000492741 CAMK2N1Q7Z7J9 78 aa9.37□□□□□ -0.91
PSPC1-204ENST00000492741 FSIP2Q5CZC0 6907 aa9.28□□□□□ -0.92
PSPC1-204ENST00000492741 KRTAP19-6Q3LI70 58 aa9.21□□□□□ -0.94
PSPC1-204ENST00000492741 PRO2289Q9P1D8 64 aa9.2□□□□□ -0.94
PSPC1-204ENST00000492741 MT1XP80297 61 aa9.17□□□□□ -0.94
PSPC1-204ENST00000492741 CRCT1Q9UGL9 99 aa9.17□□□□□ -0.94
PSPC1-204ENST00000492741 SSPOA2VEC9 5147 aa9.16□□□□□ -0.94
PSPC1-204ENST00000492741 KRTAP10-5P60370 271 aa9.15□□□□□ -0.94
PSPC1-204ENST00000492741 C10orf95Q9H7T3 257 aa8.99□□□□□ -0.97
PSPC1-204ENST00000492741 PRO0628Q9UI54 55 aa8.97□□□□□ -0.97
PSPC1-204ENST00000492741 KRTAP9-6A0A140TA67 174 aa8.94□□□□□ -0.98
PSPC1-204ENST00000492741 ROMO1P60602 79 aa8.89□□□□□ -0.99
PSPC1-204ENST00000492741 PMAIP1Q13794 54 aa8.89□□□□□ -0.99
PSPC1-204ENST00000492741 FCGBPQ9Y6R7 5405 aaPredicted RBP8.89□□□□□ -0.99
PSPC1-204ENST00000492741 TNP1P09430 55 aa8.83□□□□□ -1
PSPC1-204ENST00000492741 KRTAP10-7P60409 375 aaPredicted RBP8.8□□□□□ -1
PSPC1-204ENST00000492741 KRTAP25-1Q3LHN0 102 aa8.72□□□□□ -1.01
PSPC1-204ENST00000492741 KRTAP10-12P60413 245 aa8.7□□□□□ -1.02
PSPC1-204ENST00000492741 SVIPQ8NHG7 77 aa8.68□□□□□ -1.02
PSPC1-204ENST00000492741 KRTAP4-8A0A0G2JLE6 195 aa8.55□□□□□ -1.04
PSPC1-204ENST00000492741 KRTAP4-8Q9BYQ9 185 aa8.55□□□□□ -1.04
PSPC1-204ENST00000492741 KMT2DO14686 5537 aa8.49□□□□□ -1.05
PSPC1-204ENST00000492741 LCE3AQ5TA76 89 aa8.49□□□□□ -1.05
PSPC1-204ENST00000492741 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.48□□□□□ -1.05
PSPC1-204ENST00000492741 KRTAP8-1Q8IUC2 63 aa8.45□□□□□ -1.06
PSPC1-204ENST00000492741 MACF1Q9UPN3 7388 aaKnown RBP8.44□□□□□ -1.06
PSPC1-204ENST00000492741 KRTAP23-1A1A580 65 aa8.39□□□□□ -1.07
PSPC1-204ENST00000492741 KTN1-AS1Q86SY8 53 aa8.37□□□□□ -1.07
PSPC1-204ENST00000492741 PP632Q6XCG6 107 aa8.35□□□□□ -1.07
PSPC1-204ENST00000492741 PRAC1Q96KF2 57 aa8.33□□□□□ -1.08
PSPC1-204ENST00000492741 KRTAP19-5Q3LI72 72 aa8.24□□□□□ -1.09
PSPC1-204ENST00000492741 SYNE2Q8WXH0 6885 aaKnown RBP8.21□□□□□ -1.1
PSPC1-204ENST00000492741 SPRR2FQ96RM1 72 aa8.2□□□□□ -1.1
PSPC1-204ENST00000492741 KRTAP6-3Q3LI67 103 aa8.18□□□□□ -1.1
PSPC1-204ENST00000492741 KRTAP19-7Q3SYF9 63 aa8.17□□□□□ -1.1
PSPC1-204ENST00000492741 KRTAP12-3P60328 96 aa8.16□□□□□ -1.1
PSPC1-204ENST00000492741 KRTAP9-7A8MTY7 169 aa8.15□□□□□ -1.11
PSPC1-204ENST00000492741 KRTAP5-9P26371 169 aa8.15□□□□□ -1.11
PSPC1-204ENST00000492741 MT1EP04732 61 aa8.06□□□□□ -1.12
PSPC1-204ENST00000492741 MUC12Q9UKN1 5478 aa7.94□□□□□ -1.14
PSPC1-204ENST00000492741 KRTAP15-1Q3LI76 137 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms