RNA–Protein interactions for RNA: ENST00000491718.5

TNRC6A-207, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 7,956 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-207ENST00000491718 MT1HL1P0DM35 61 aa2.81□□□□□ -1.96
TNRC6A-207ENST00000491718 BSNQ9UPA5 3926 aa2.8□□□□□ -1.96
TNRC6A-207ENST00000491718 KRTAP8-1Q8IUC2 63 aa2.78□□□□□ -1.96
TNRC6A-207ENST00000491718 CRCT1Q9UGL9 99 aa2.78□□□□□ -1.97
TNRC6A-207ENST00000491718 ZNF469Q96JG9 3925 aaPredicted RBP2.76□□□□□ -1.97
TNRC6A-207ENST00000491718 DNAH10Q8IVF4 4471 aa2.76□□□□□ -1.97
TNRC6A-207ENST00000491718 HUWE1Q7Z6Z7 4374 aaKnown RBP2.74□□□□□ -1.97
TNRC6A-207ENST00000491718 ANK3Q12955 4377 aaKnown RBP2.73□□□□□ -1.97
TNRC6A-207ENST00000491718 AKAP9Q99996 3911 aa2.73□□□□□ -1.97
TNRC6A-207ENST00000491718 LORP23490 312 aaPredicted RBP2.72□□□□□ -1.97
TNRC6A-207ENST00000491718 PLECQ15149 4684 aaKnown RBP2.71□□□□□ -1.97
TNRC6A-207ENST00000491718 KRTAP12-3P60328 96 aa2.71□□□□□ -1.98
TNRC6A-207ENST00000491718 SACSQ9NZJ4 4579 aa2.7□□□□□ -1.98
TNRC6A-207ENST00000491718 DNAH5Q8TE73 4624 aa2.69□□□□□ -1.98
TNRC6A-207ENST00000491718 DNAH17Q9UFH2 4485 aa2.69□□□□□ -1.98
TNRC6A-207ENST00000491718 LCE3AQ5TA76 89 aa2.67□□□□□ -1.98
TNRC6A-207ENST00000491718 SPRR2GQ9BYE4 73 aa2.67□□□□□ -1.98
TNRC6A-207ENST00000491718 DNAH1Q9P2D7 4330 aa2.66□□□□□ -1.98
TNRC6A-207ENST00000491718 KRTAP10-5P60370 271 aa2.65□□□□□ -1.98
TNRC6A-207ENST00000491718 DYNC1H1Q14204 4646 aaKnown RBP2.65□□□□□ -1.98
TNRC6A-207ENST00000491718 RYR2Q92736 4967 aa2.65□□□□□ -1.99
TNRC6A-207ENST00000491718 KRTAP17-1Q9BYP8 105 aa2.61□□□□□ -1.99
TNRC6A-207ENST00000491718 APOBP04114 4563 aaKnown RBP2.59□□□□□ -1.99
TNRC6A-207ENST00000491718 KRTAP4-5Q9BYR2 181 aa2.59□□□□□ -2
TNRC6A-207ENST00000491718 STARD9Q9P2P6 4700 aa2.59□□□□□ -2
TNRC6A-207ENST00000491718 HSPG2P98160 4391 aa2.58□□□□□ -2
TNRC6A-207ENST00000491718 VPS13DQ5THJ4 4388 aa2.58□□□□□ -2
TNRC6A-207ENST00000491718 DNHD1Q96M86 4753 aa2.57□□□□□ -2
TNRC6A-207ENST00000491718 DNAH3Q8TD57 4116 aa2.56□□□□□ -2
TNRC6A-207ENST00000491718 LRP1BQ9NZR2 4599 aa2.56□□□□□ -2
TNRC6A-207ENST00000491718 DNAH8Q96JB1 4490 aa2.55□□□□□ -2
TNRC6A-207ENST00000491718 CMYA5Q8N3K9 4069 aa2.53□□□□□ -2
TNRC6A-207ENST00000491718 KMT2CQ8NEZ4 4911 aaKnown RBP2.53□□□□□ -2
TNRC6A-207ENST00000491718 DYNC2H1Q8NCM8 4307 aaKnown RBP2.53□□□□□ -2
TNRC6A-207ENST00000491718 DNAH6Q9C0G6 4158 aa2.52□□□□□ -2.01
TNRC6A-207ENST00000491718 KRTAP19-8Q3LI54 63 aa2.52□□□□□ -2.01
TNRC6A-207ENST00000491718 KRTAP10-7P60409 375 aaPredicted RBP2.51□□□□□ -2.01
TNRC6A-207ENST00000491718 LYSTQ99698 3801 aa2.51□□□□□ -2.01
TNRC6A-207ENST00000491718 KIAA1109Q2LD37 5005 aa2.5□□□□□ -2.01
TNRC6A-207ENST00000491718 RYR3Q15413 4870 aa2.5□□□□□ -2.01
TNRC6A-207ENST00000491718 KRTAP4-1Q9BYQ7 146 aa2.5□□□□□ -2.01
TNRC6A-207ENST00000491718 MYCBP2O75592 4640 aa2.49□□□□□ -2.01
TNRC6A-207ENST00000491718 LCE3CQ5T5A8 94 aa2.49□□□□□ -2.01
TNRC6A-207ENST00000491718 DNAH9Q9NYC9 4486 aa2.47□□□□□ -2.01
TNRC6A-207ENST00000491718 FAT1Q14517 4588 aa2.47□□□□□ -2.01
TNRC6A-207ENST00000491718 BIRC6Q9NR09 4857 aa2.46□□□□□ -2.02
TNRC6A-207ENST00000491718 FAT3Q8TDW7 4589 aa2.44□□□□□ -2.02
TNRC6A-207ENST00000491718 MT2AP02795 61 aa2.43□□□□□ -2.02
TNRC6A-207ENST00000491718 VPS13BQ7Z7G8 4022 aa2.43□□□□□ -2.02
TNRC6A-207ENST00000491718 KMT2AQ03164 3969 aa2.43□□□□□ -2.02
TNRC6A-207ENST00000491718 ANK2Q01484 3957 aa2.42□□□□□ -2.02
TNRC6A-207ENST00000491718 PCLOQ9Y6V0 5065 aa2.41□□□□□ -2.02
TNRC6A-207ENST00000491718 KRTAP19-1Q8IUB9 90 aa2.4□□□□□ -2.02
TNRC6A-207ENST00000491718 DNAH7Q8WXX0 4024 aa2.39□□□□□ -2.03
TNRC6A-207ENST00000491718 HECTD4Q9Y4D8 3996 aa2.39□□□□□ -2.03
TNRC6A-207ENST00000491718 MT1HP80294 61 aa2.37□□□□□ -2.03
TNRC6A-207ENST00000491718 MT1FP04733 61 aa2.37□□□□□ -2.03
TNRC6A-207ENST00000491718 KRTAP9-6A0A140TA67 174 aa2.36□□□□□ -2.03
TNRC6A-207ENST00000491718 SPRR2FQ96RM1 72 aa2.36□□□□□ -2.03
TNRC6A-207ENST00000491718 FAT2Q9NYQ8 4349 aa2.36□□□□□ -2.03
TNRC6A-207ENST00000491718 LRP1Q07954 4544 aaKnown RBP2.36□□□□□ -2.03
TNRC6A-207ENST00000491718 PRKDCP78527 4128 aaKnown RBP2.35□□□□□ -2.03
TNRC6A-207ENST00000491718 KRTAP19-5Q3LI72 72 aa2.34□□□□□ -2.03
TNRC6A-207ENST00000491718 ABCA13Q86UQ4 5058 aa2.34□□□□□ -2.04
TNRC6A-207ENST00000491718 HERC2O95714 4834 aa2.34□□□□□ -2.04
TNRC6A-207ENST00000491718 KRTAP2-3P0C7H8 128 aa2.33□□□□□ -2.04
TNRC6A-207ENST00000491718 KRTAP2-4Q9BYR9 128 aa2.33□□□□□ -2.04
TNRC6A-207ENST00000491718 KRTAP2-1Q9BYU5 128 aa2.33□□□□□ -2.04
TNRC6A-207ENST00000491718 MT1XP80297 61 aa2.32□□□□□ -2.04
TNRC6A-207ENST00000491718 KRTAP19-2Q3LHN2 52 aa2.31□□□□□ -2.04
TNRC6A-207ENST00000491718 KRTAP9-2Q9BYQ4 174 aa2.3□□□□□ -2.04
TNRC6A-207ENST00000491718 MT1BP07438 61 aa2.3□□□□□ -2.04
TNRC6A-207ENST00000491718 FRAS1Q86XX4 4008 aa2.29□□□□□ -2.04
TNRC6A-207ENST00000491718 HYDINQ4G0P3 5121 aa2.29□□□□□ -2.04
TNRC6A-207ENST00000491718 SPRR2EP22531 72 aa2.28□□□□□ -2.04
TNRC6A-207ENST00000491718 SPRR2BP35325 72 aa2.28□□□□□ -2.04
TNRC6A-207ENST00000491718 SPRR2AP35326 72 aa2.28□□□□□ -2.04
TNRC6A-207ENST00000491718 MT3P25713 68 aa2.28□□□□□ -2.04
TNRC6A-207ENST00000491718 KRTAP12-4P60329 112 aa2.28□□□□□ -2.05
TNRC6A-207ENST00000491718 PKHD1P08F94 4074 aa2.27□□□□□ -2.05
TNRC6A-207ENST00000491718 MUC17Q685J3 4493 aa2.26□□□□□ -2.05
TNRC6A-207ENST00000491718 PKHD1L1Q86WI1 4243 aa2.26□□□□□ -2.05
TNRC6A-207ENST00000491718 EPPK1P58107 5090 aaKnown RBP2.25□□□□□ -2.05
TNRC6A-207ENST00000491718 PKD1P98161 4303 aa2.24□□□□□ -2.05
TNRC6A-207ENST00000491718 RNF213Q63HN8 5207 aa2.23□□□□□ -2.05
TNRC6A-207ENST00000491718 MT1LQ93083 61 aa2.22□□□□□ -2.05
TNRC6A-207ENST00000491718 SPRR2DP22532 72 aa2.22□□□□□ -2.05
TNRC6A-207ENST00000491718 LCE2CQ5TA81 110 aa2.22□□□□□ -2.05
TNRC6A-207ENST00000491718 MT1EP04732 61 aa2.21□□□□□ -2.06
TNRC6A-207ENST00000491718 LCE2BO14633 110 aa2.2□□□□□ -2.06
TNRC6A-207ENST00000491718 FLGP20930 4061 aaPredicted RBP2.19□□□□□ -2.06
TNRC6A-207ENST00000491718 LCE3BQ5TA77 95 aa2.19□□□□□ -2.06
TNRC6A-207ENST00000491718 KRTAP9-8Q9BYQ0 159 aa2.19□□□□□ -2.06
TNRC6A-207ENST00000491718 UBR4Q5T4S7 5183 aa2.18□□□□□ -2.06
TNRC6A-207ENST00000491718 LRP2P98164 4655 aa2.17□□□□□ -2.06
TNRC6A-207ENST00000491718 HMCN2Q8NDA2 5059 aa2.16□□□□□ -2.06
TNRC6A-207ENST00000491718 KRTAP9-3Q9BYQ3 159 aa2.15□□□□□ -2.06
TNRC6A-207ENST00000491718 TNXBP22105 4242 aa2.15□□□□□ -2.07
TNRC6A-207ENST00000491718 MT1GP13640 62 aa2.14□□□□□ -2.07
TNRC6A-207ENST00000491718 KRTAP9-7A8MTY7 169 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms