RNA–Protein interactions for RNA: ENST00000491383.5

KDM3A-214, Transcript of lysine demethylase 3A, humanhuman

TSL 1 (best)

Gene KDM3A, Length 4,485 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-214ENST00000491383 DNAH2Q9P225 4427 aa2.82□□□□□ -1.96
KDM3A-214ENST00000491383 SRRM2Q9UQ35 2752 aaKnown RBP2.82□□□□□ -1.96
KDM3A-214ENST00000491383 DNAH17Q9UFH2 4485 aa2.81□□□□□ -1.96
KDM3A-214ENST00000491383 A0A1B0GVY2 172 aa2.81□□□□□ -1.96
KDM3A-214ENST00000491383 RPS29P62273 56 aaKnown RBP2.81□□□□□ -1.96
KDM3A-214ENST00000491383 SACSQ9NZJ4 4579 aa2.79□□□□□ -1.96
KDM3A-214ENST00000491383 PLAC4Q8WY50 150 aa2.79□□□□□ -1.96
KDM3A-214ENST00000491383 PKD1P98161 4303 aa2.77□□□□□ -1.97
KDM3A-214ENST00000491383 DNAH11Q96DT5 4516 aa2.76□□□□□ -1.97
KDM3A-214ENST00000491383 PKHD1P08F94 4074 aa2.75□□□□□ -1.97
KDM3A-214ENST00000491383 RYR2Q92736 4967 aa2.75□□□□□ -1.97
KDM3A-214ENST00000491383 HYDINQ4G0P3 5121 aa2.75□□□□□ -1.97
KDM3A-214ENST00000491383 DNAH8Q96JB1 4490 aa2.75□□□□□ -1.97
KDM3A-214ENST00000491383 DNAH5Q8TE73 4624 aa2.72□□□□□ -1.97
KDM3A-214ENST00000491383 TPRXLQ17RH7 258 aa2.72□□□□□ -1.97
KDM3A-214ENST00000491383 PP632Q6XCG6 107 aa2.71□□□□□ -1.98
KDM3A-214ENST00000491383 DYNC1H1Q14204 4646 aaKnown RBP2.71□□□□□ -1.98
KDM3A-214ENST00000491383 MYCBP2O75592 4640 aa2.71□□□□□ -1.98
KDM3A-214ENST00000491383 KRTAP1-4P0C5Y4 121 aa2.7□□□□□ -1.98
KDM3A-214ENST00000491383 KRTAP15-1Q3LI76 137 aa2.7□□□□□ -1.98
KDM3A-214ENST00000491383 KMT2CQ8NEZ4 4911 aaKnown RBP2.7□□□□□ -1.98
KDM3A-214ENST00000491383 Q5VSD8 79 aa2.7□□□□□ -1.98
KDM3A-214ENST00000491383 LRP1BQ9NZR2 4599 aa2.68□□□□□ -1.98
KDM3A-214ENST00000491383 KRTAP10-8P60410 259 aa2.68□□□□□ -1.98
KDM3A-214ENST00000491383 FAT3Q8TDW7 4589 aa2.67□□□□□ -1.98
KDM3A-214ENST00000491383 TNP1P09430 55 aa2.66□□□□□ -1.98
KDM3A-214ENST00000491383 RYR3Q15413 4870 aa2.66□□□□□ -1.98
KDM3A-214ENST00000491383 KRTAP10-4P60372 401 aaPredicted RBP2.65□□□□□ -1.98
KDM3A-214ENST00000491383 APOBP04114 4563 aaKnown RBP2.65□□□□□ -1.99
KDM3A-214ENST00000491383 KRTAP12-2P59991 146 aa2.64□□□□□ -1.99
KDM3A-214ENST00000491383 KRTAP3-1Q9BYR8 98 aa2.62□□□□□ -1.99
KDM3A-214ENST00000491383 PKHD1L1Q86WI1 4243 aa2.62□□□□□ -1.99
KDM3A-214ENST00000491383 M0R2T5 61 aa2.6□□□□□ -1.99
KDM3A-214ENST00000491383 KRTAP12-1P59990 96 aa2.6□□□□□ -1.99
KDM3A-214ENST00000491383 HSPG2P98160 4391 aa2.6□□□□□ -1.99
KDM3A-214ENST00000491383 RYR1P21817 5038 aa2.59□□□□□ -1.99
KDM3A-214ENST00000491383 TNXBP22105 4242 aa2.59□□□□□ -1.99
KDM3A-214ENST00000491383 XP32Q5T750 250 aa2.59□□□□□ -1.99
KDM3A-214ENST00000491383 KRTAP13-4Q3LI77 160 aa2.58□□□□□ -2
KDM3A-214ENST00000491383 KRTAP10-6P60371 365 aaPredicted RBP2.58□□□□□ -2
KDM3A-214ENST00000491383 LORP23490 312 aaPredicted RBP2.57□□□□□ -2
KDM3A-214ENST00000491383 FAT1Q14517 4588 aa2.57□□□□□ -2
KDM3A-214ENST00000491383 KRTAP23-1A1A580 65 aa2.57□□□□□ -2
KDM3A-214ENST00000491383 BIRC6Q9NR09 4857 aa2.56□□□□□ -2
KDM3A-214ENST00000491383 EPPK1P58107 5090 aaKnown RBP2.56□□□□□ -2
KDM3A-214ENST00000491383 KRTAP4-5Q9BYR2 181 aa2.54□□□□□ -2
KDM3A-214ENST00000491383 MT1HL1P0DM35 61 aa2.54□□□□□ -2
KDM3A-214ENST00000491383 KIAA1109Q2LD37 5005 aa2.53□□□□□ -2
KDM3A-214ENST00000491383 HERC2O95714 4834 aa2.51□□□□□ -2.01
KDM3A-214ENST00000491383 LPAP08519 4548 aa2.48□□□□□ -2.01
KDM3A-214ENST00000491383 LRP1Q07954 4544 aaKnown RBP2.46□□□□□ -2.02
KDM3A-214ENST00000491383 INE1O15225 51 aa2.43□□□□□ -2.02
KDM3A-214ENST00000491383 PRO2289Q9P1D8 64 aa2.43□□□□□ -2.02
KDM3A-214ENST00000491383 ABCA13Q86UQ4 5058 aa2.43□□□□□ -2.02
KDM3A-214ENST00000491383 PCLOQ9Y6V0 5065 aa2.38□□□□□ -2.03
KDM3A-214ENST00000491383 KRTAP10-10P60014 251 aa2.31□□□□□ -2.04
KDM3A-214ENST00000491383 MUC17Q685J3 4493 aa2.31□□□□□ -2.04
KDM3A-214ENST00000491383 HERC1Q15751 4861 aa2.29□□□□□ -2.04
KDM3A-214ENST00000491383 HMCN2Q8NDA2 5059 aa2.28□□□□□ -2.04
KDM3A-214ENST00000491383 KRTAP4-1Q9BYQ7 146 aa2.25□□□□□ -2.05
KDM3A-214ENST00000491383 LRP2P98164 4655 aa2.25□□□□□ -2.05
KDM3A-214ENST00000491383 FLGP20930 4061 aaPredicted RBP2.25□□□□□ -2.05
KDM3A-214ENST00000491383 MUC2Q02817 5179 aa2.2□□□□□ -2.06
KDM3A-214ENST00000491383 LCE3AQ5TA76 89 aa2.19□□□□□ -2.06
KDM3A-214ENST00000491383 KRTAP12-3P60328 96 aa2.18□□□□□ -2.06
KDM3A-214ENST00000491383 KRTAP19-2Q3LHN2 52 aa2.17□□□□□ -2.06
KDM3A-214ENST00000491383 KRTAP10-12P60413 245 aa2.17□□□□□ -2.06
KDM3A-214ENST00000491383 RNF213Q63HN8 5207 aa2.16□□□□□ -2.06
KDM3A-214ENST00000491383 KRTAP9-6A0A140TA67 174 aa2.15□□□□□ -2.07
KDM3A-214ENST00000491383 MT1HP80294 61 aa2.14□□□□□ -2.07
KDM3A-214ENST00000491383 UBR4Q5T4S7 5183 aa2.13□□□□□ -2.07
KDM3A-214ENST00000491383 FAT4Q6V0I7 4981 aa2.08□□□□□ -2.08
KDM3A-214ENST00000491383 SPRR5A0A1B0GTR4 108 aa2.07□□□□□ -2.08
KDM3A-214ENST00000491383 KRTAP9-9Q9BYP9 154 aa2.07□□□□□ -2.08
KDM3A-214ENST00000491383 KRTAP9-4Q9BYQ2 154 aa2.07□□□□□ -2.08
KDM3A-214ENST00000491383 MT2AP02795 61 aa2.05□□□□□ -2.08
KDM3A-214ENST00000491383 KRTAP9-2Q9BYQ4 174 aa2.05□□□□□ -2.08
KDM3A-214ENST00000491383 KRTAP9-8Q9BYQ0 159 aa2.04□□□□□ -2.08
KDM3A-214ENST00000491383 MT1FP04733 61 aa2.03□□□□□ -2.09
KDM3A-214ENST00000491383 LOC100996750A0A140TA64 210 aa2.02□□□□□ -2.09
KDM3A-214ENST00000491383 KRTAP8-1Q8IUC2 63 aa2.02□□□□□ -2.09
KDM3A-214ENST00000491383 KRTAP4-6Q9BYQ5 205 aa2.02□□□□□ -2.09
KDM3A-214ENST00000491383 SPRR2GQ9BYE4 73 aa2□□□□□ -2.09
KDM3A-214ENST00000491383 CRCT1Q9UGL9 99 aa2□□□□□ -2.09
KDM3A-214ENST00000491383 KRTAP10-5P60370 271 aa1.98□□□□□ -2.09
KDM3A-214ENST00000491383 KRTAP9-3Q9BYQ3 159 aa1.98□□□□□ -2.09
KDM3A-214ENST00000491383 LCE5AQ5TCM9 118 aa1.97□□□□□ -2.09
KDM3A-214ENST00000491383 KRTAP19-1Q8IUB9 90 aa1.97□□□□□ -2.09
KDM3A-214ENST00000491383 KRTAP19-8Q3LI54 63 aa1.95□□□□□ -2.1
KDM3A-214ENST00000491383 LCE3CQ5T5A8 94 aa1.95□□□□□ -2.1
KDM3A-214ENST00000491383 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.94□□□□□ -2.1
KDM3A-214ENST00000491383 LCE4AQ5TA78 99 aa1.94□□□□□ -2.1
KDM3A-214ENST00000491383 KRTAP9-7A8MTY7 169 aa1.91□□□□□ -2.1
KDM3A-214ENST00000491383 KRTAP19-5Q3LI72 72 aa1.91□□□□□ -2.1
KDM3A-214ENST00000491383 MT1BP07438 61 aa1.91□□□□□ -2.1
KDM3A-214ENST00000491383 KRTAP2-2Q9BYT5 123 aa1.91□□□□□ -2.1
KDM3A-214ENST00000491383 KRTAP19-4Q3LI73 84 aa1.86□□□□□ -2.11
KDM3A-214ENST00000491383 USH2AO75445 5202 aa1.85□□□□□ -2.11
KDM3A-214ENST00000491383 KRTAP10-7P60409 375 aaPredicted RBP1.85□□□□□ -2.11
KDM3A-214ENST00000491383 KRTAP19-6Q3LI70 58 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms