RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 PCNTO95613 3336 aa-1.14□□□□□ -2.59
CD46-216ENST00000490278 MT1BP07438 61 aa-1.14□□□□□ -2.59
CD46-216ENST00000490278 RALGAPBQ86X10 1494 aa-1.14□□□□□ -2.59
CD46-216ENST00000490278 SMARCA2P51531 1590 aa-1.14□□□□□ -2.59
CD46-216ENST00000490278 RNF17Q9BXT8 1623 aaKnown RBP-1.15□□□□□ -2.59
CD46-216ENST00000490278 FRYLO94915 3013 aa-1.15□□□□□ -2.59
CD46-216ENST00000490278 DMDP11532 3685 aa-1.15□□□□□ -2.59
CD46-216ENST00000490278 THOC2Q8NI27 1593 aaKnown RBP-1.15□□□□□ -2.59
CD46-216ENST00000490278 S100A8P05109 93 aa-1.15□□□□□ -2.59
CD46-216ENST00000490278 M0QZ58 72 aa-1.16□□□□□ -2.6
CD46-216ENST00000490278 MYO5CQ9NQX4 1742 aa-1.16□□□□□ -2.6
CD46-216ENST00000490278 LMTK2Q8IWU2 1503 aa-1.16□□□□□ -2.6
CD46-216ENST00000490278 CEP350Q5VT06 3117 aa-1.16□□□□□ -2.6
CD46-216ENST00000490278 V9GYS6 101 aa-1.17□□□□□ -2.6
CD46-216ENST00000490278 ABCC6O95255 1503 aa-1.17□□□□□ -2.6
CD46-216ENST00000490278 VPS8Q8N3P4 1428 aa-1.17□□□□□ -2.6
CD46-216ENST00000490278 ADIRFQ15847 76 aa-1.18□□□□□ -2.6
CD46-216ENST00000490278 DEFB121Q5J5C9 76 aa-1.18□□□□□ -2.6
CD46-216ENST00000490278 ST20Q9HBF5 79 aa-1.18□□□□□ -2.6
CD46-216ENST00000490278 ABRACLQ9P1F3 81 aa-1.18□□□□□ -2.6
CD46-216ENST00000490278 RRBP1Q9P2E9 1410 aaKnown RBP-1.18□□□□□ -2.6
CD46-216ENST00000490278 INO80Q9ULG1 1556 aaPredicted RBP-1.18□□□□□ -2.6
CD46-216ENST00000490278 ABCC3O15438 1527 aa-1.19□□□□□ -2.6
CD46-216ENST00000490278 TTC37Q6PGP7 1564 aa-1.19□□□□□ -2.6
CD46-216ENST00000490278 SZT2Q5T011 3432 aa-1.19□□□□□ -2.6
CD46-216ENST00000490278 NHSQ6T4R5 1651 aa-1.2□□□□□ -2.6
CD46-216ENST00000490278 HILPDAQ9Y5L2 63 aa-1.2□□□□□ -2.6
CD46-216ENST00000490278 DIP2AQ14689 1571 aa-1.21□□□□□ -2.6
CD46-216ENST00000490278 UACAQ9BZF9 1416 aa-1.21□□□□□ -2.6
CD46-216ENST00000490278 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.21□□□□□ -2.6
CD46-216ENST00000490278 KRTAP20-1Q3LI63 56 aa-1.21□□□□□ -2.6
CD46-216ENST00000490278 WFDC10BQ8IUB3 73 aa-1.21□□□□□ -2.6
CD46-216ENST00000490278 CD163L1Q9NR16 1453 aa-1.21□□□□□ -2.6
CD46-216ENST00000490278 DNMBPQ6XZF7 1577 aa-1.21□□□□□ -2.6
CD46-216ENST00000490278 MED14O60244 1454 aa-1.22□□□□□ -2.6
CD46-216ENST00000490278 LEAP2Q969E1 77 aa-1.22□□□□□ -2.6
CD46-216ENST00000490278 GNG13Q9P2W3 67 aa-1.23□□□□□ -2.61
CD46-216ENST00000490278 PEG3Q9GZU2 1588 aa-1.23□□□□□ -2.61
CD46-216ENST00000490278 MROH1Q8NDA8 1641 aa-1.23□□□□□ -2.61
CD46-216ENST00000490278 FAM208AQ9UK61 1670 aaKnown RBP-1.23□□□□□ -2.61
CD46-216ENST00000490278 S100A13Q99584 98 aa-1.24□□□□□ -2.61
CD46-216ENST00000490278 WDFY4Q6ZS81 3184 aa-1.24□□□□□ -2.61
CD46-216ENST00000490278 C3P01024 1663 aa-1.25□□□□□ -2.61
CD46-216ENST00000490278 SMIM27A0A1W2PRY6 76 aa-1.25□□□□□ -2.61
CD46-216ENST00000490278 ATXN8Q156A1 80 aa-1.25□□□□□ -2.61
CD46-216ENST00000490278 DCAF1Q9Y4B6 1507 aa-1.25□□□□□ -2.61
CD46-216ENST00000490278 KIF21BO75037 1637 aa-1.26□□□□□ -2.61
CD46-216ENST00000490278 PREX2Q70Z35 1606 aa-1.26□□□□□ -2.61
CD46-216ENST00000490278 M0R1W7 72 aa-1.26□□□□□ -2.61
CD46-216ENST00000490278 DEFB136Q30KP8 78 aa-1.26□□□□□ -2.61
CD46-216ENST00000490278 C18orf32Q8TCD1 76 aa-1.26□□□□□ -2.61
CD46-216ENST00000490278 CLASP1Q7Z460 1538 aa-1.26□□□□□ -2.61
CD46-216ENST00000490278 GLI2P10070 1586 aa-1.26□□□□□ -2.61
CD46-216ENST00000490278 CROCC2H7BZ55 1655 aa-1.26□□□□□ -2.61
CD46-216ENST00000490278 POLR2KP53803 58 aaKnown RBP-1.27□□□□□ -2.61
CD46-216ENST00000490278 RPS29P62273 56 aaKnown RBP-1.27□□□□□ -2.61
CD46-216ENST00000490278 DEFB114Q30KQ6 69 aa-1.27□□□□□ -2.61
CD46-216ENST00000490278 LINC00308Q8TCZ7 52 aa-1.27□□□□□ -2.61
CD46-216ENST00000490278 ABCC1P33527 1531 aa-1.28□□□□□ -2.61
CD46-216ENST00000490278 K7EMI3 77 aa-1.28□□□□□ -2.61
CD46-216ENST00000490278 DNAH14Q0VDD8 3507 aa-1.28□□□□□ -2.61
CD46-216ENST00000490278 TIAM1Q13009 1591 aa-1.29□□□□□ -2.62
CD46-216ENST00000490278 EFCAB6Q5THR3 1501 aa-1.3□□□□□ -2.62
CD46-216ENST00000490278 USP34Q70CQ2 3546 aa-1.3□□□□□ -2.62
CD46-216ENST00000490278 LINC01549A6NIU2 74 aa-1.31□□□□□ -2.62
CD46-216ENST00000490278 KRTAP19-6Q3LI70 58 aa-1.31□□□□□ -2.62
CD46-216ENST00000490278 MADDQ8WXG6 1647 aa-1.31□□□□□ -2.62
CD46-216ENST00000490278 EEA1Q15075 1411 aa-1.32□□□□□ -2.62
CD46-216ENST00000490278 ANKARQ7Z5J8 1434 aa-1.32□□□□□ -2.62
CD46-216ENST00000490278 MUC3AQ02505 3323 aa-1.32□□□□□ -2.62
CD46-216ENST00000490278 CFAP74Q9C0B2 1584 aa-1.32□□□□□ -2.62
CD46-216ENST00000490278 EP400Q96L91 3159 aa-1.32□□□□□ -2.62
CD46-216ENST00000490278 NMES1Q9C002 83 aa-1.33□□□□□ -2.62
CD46-216ENST00000490278 TMEM167BQ9NRX6 74 aa-1.33□□□□□ -2.62
CD46-216ENST00000490278 CEP250Q9BV73 2442 aa-1.33□□□□□ -2.62
CD46-216ENST00000490278 ABCA9Q8IUA7 1624 aa-1.33□□□□□ -2.62
CD46-216ENST00000490278 DCHS1Q96JQ0 3298 aa-1.34□□□□□ -2.62
CD46-216ENST00000490278 MT1FP04733 61 aa-1.34□□□□□ -2.62
CD46-216ENST00000490278 GNG2P59768 71 aa-1.34□□□□□ -2.62
CD46-216ENST00000490278 IQGAP3Q86VI3 1631 aa-1.34□□□□□ -2.62
CD46-216ENST00000490278 ABCA8O94911 1581 aa-1.34□□□□□ -2.62
CD46-216ENST00000490278 ALS2Q96Q42 1657 aa-1.35□□□□□ -2.63
CD46-216ENST00000490278 CENPEQ02224 2701 aa-1.36□□□□□ -2.63
CD46-216ENST00000490278 CCDC18Q5T9S5 1454 aa-1.36□□□□□ -2.63
CD46-216ENST00000490278 TFF3Q07654 80 aa-1.36□□□□□ -2.63
CD46-216ENST00000490278 CFAP47Q6ZTR5 3102 aa-1.37□□□□□ -2.63
CD46-216ENST00000490278 MKI67P46013 3256 aaKnown RBP-1.39□□□□□ -2.63
CD46-216ENST00000490278 XIRP2A4UGR9 3374 aa-1.39□□□□□ -2.63
CD46-216ENST00000490278 UNC80Q8N2C7 3258 aa-1.39□□□□□ -2.63
CD46-216ENST00000490278 IGIPA6NJ69 53 aa-1.4□□□□□ -2.63
CD46-216ENST00000490278 UGGT2Q9NYU1 1516 aa-1.4□□□□□ -2.63
CD46-216ENST00000490278 DEFB131AP59861 70 aa-1.42□□□□□ -2.64
CD46-216ENST00000490278 SERF2P84101 59 aa-1.42□□□□□ -2.64
CD46-216ENST00000490278 DUOX2Q9NRD8 1548 aa-1.42□□□□□ -2.64
CD46-216ENST00000490278 DNAH12Q6ZR08 3092 aa-1.43□□□□□ -2.64
CD46-216ENST00000490278 ABCA6Q8N139 1617 aa-1.43□□□□□ -2.64
CD46-216ENST00000490278 UGGT1Q9NYU2 1555 aa-1.43□□□□□ -2.64
CD46-216ENST00000490278 TTTY10Q9BZA0 68 aa-1.44□□□□□ -2.64
CD46-216ENST00000490278 SCRIBQ14160 1630 aa-1.44□□□□□ -2.64
CD46-216ENST00000490278 LMO7Q8WWI1 1683 aa-1.45□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms