RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 KRTAP10-8P60410 259 aa3.56□□□□□ -1.84
SF3A3-208ENST00000489537 NOTCH2NLQ7Z3S9 236 aa3.56□□□□□ -1.84
SF3A3-208ENST00000489537 KRTAP16-1A8MUX0 517 aa3.55□□□□□ -1.84
SF3A3-208ENST00000489537 MT1HL1P0DM35 61 aa3.55□□□□□ -1.84
SF3A3-208ENST00000489537 ACYP2P14621 99 aa3.54□□□□□ -1.84
SF3A3-208ENST00000489537 KRTAP13-3Q3SY46 172 aa3.54□□□□□ -1.84
SF3A3-208ENST00000489537 LCE1AQ5T7P2 110 aa3.54□□□□□ -1.84
SF3A3-208ENST00000489537 C7orf65Q6ZTY9 151 aa3.54□□□□□ -1.84
SF3A3-208ENST00000489537 C20orf166-AS1Q96NR2 134 aa3.54□□□□□ -1.84
SF3A3-208ENST00000489537 A8MUN3 132 aa3.53□□□□□ -1.84
SF3A3-208ENST00000489537 A8MUU9 505 aa3.53□□□□□ -1.84
SF3A3-208ENST00000489537 Q5W150 140 aa3.53□□□□□ -1.84
SF3A3-208ENST00000489537 RNF213Q63HN8 5207 aa3.52□□□□□ -1.85
SF3A3-208ENST00000489537 PCOTHQ58A44 107 aa3.52□□□□□ -1.85
SF3A3-208ENST00000489537 Q75L30 129 aa3.52□□□□□ -1.85
SF3A3-208ENST00000489537 LPAP08519 4548 aa3.52□□□□□ -1.85
SF3A3-208ENST00000489537 ATP11AUNQ6ZP68 121 aa3.5□□□□□ -1.85
SF3A3-208ENST00000489537 SPTSSBQ8NFR3 76 aa3.5□□□□□ -1.85
SF3A3-208ENST00000489537 Q1T7F1 81 aa3.49□□□□□ -1.85
SF3A3-208ENST00000489537 COA5Q86WW8 74 aa3.49□□□□□ -1.85
SF3A3-208ENST00000489537 DMAC1Q96GE9 116 aa3.49□□□□□ -1.85
SF3A3-208ENST00000489537 IGKV2D-30A0A075B6S6 120 aa3.48□□□□□ -1.85
SF3A3-208ENST00000489537 CHKB-CPT1BH3BT56 60 aa3.48□□□□□ -1.85
SF3A3-208ENST00000489537 HRES1P13985 223 aa3.48□□□□□ -1.85
SF3A3-208ENST00000489537 PRR4Q16378 134 aa3.47□□□□□ -1.85
SF3A3-208ENST00000489537 C9orf92A6NGG3 77 aa3.46□□□□□ -1.86
SF3A3-208ENST00000489537 TPRXLQ17RH7 258 aa3.45□□□□□ -1.86
SF3A3-208ENST00000489537 PRR15LQ9BU68 103 aa3.45□□□□□ -1.86
SF3A3-208ENST00000489537 RPL37P61927 97 aaKnown RBP3.43□□□□□ -1.86
SF3A3-208ENST00000489537 RETNLBQ9BQ08 111 aa3.43□□□□□ -1.86
SF3A3-208ENST00000489537 SPINK7P58062 85 aa3.42□□□□□ -1.86
SF3A3-208ENST00000489537 MPLKIPQ8TAP9 179 aa3.42□□□□□ -1.86
SF3A3-208ENST00000489537 LINC01558Q9Y6Z2 57 aa3.41□□□□□ -1.86
SF3A3-208ENST00000489537 SEC61GP60059 68 aa3.39□□□□□ -1.87
SF3A3-208ENST00000489537 MUC2Q02817 5179 aa3.38□□□□□ -1.87
SF3A3-208ENST00000489537 SEC61BP60468 96 aaKnown RBP3.38□□□□□ -1.87
SF3A3-208ENST00000489537 C4orf26Q17RF5 130 aa3.38□□□□□ -1.87
SF3A3-208ENST00000489537 COX6B2Q6YFQ2 88 aa3.38□□□□□ -1.87
SF3A3-208ENST00000489537 KRTAP10-7P60409 375 aaPredicted RBP3.36□□□□□ -1.87
SF3A3-208ENST00000489537 A0A1B0GU69 56 aa3.35□□□□□ -1.87
SF3A3-208ENST00000489537 RBM12B-AS1Q9P1G2 102 aa3.35□□□□□ -1.87
SF3A3-208ENST00000489537 PRO0628Q9UI54 55 aa3.35□□□□□ -1.87
SF3A3-208ENST00000489537 PSPHP1O15172 72 aa3.34□□□□□ -1.87
SF3A3-208ENST00000489537 KRTAP10-6P60371 365 aaPredicted RBP3.34□□□□□ -1.87
SF3A3-208ENST00000489537 FAT4Q6V0I7 4981 aa3.34□□□□□ -1.88
SF3A3-208ENST00000489537 KRTAP2-2Q9BYT5 123 aa3.33□□□□□ -1.88
SF3A3-208ENST00000489537 MUC17Q685J3 4493 aa3.32□□□□□ -1.88
SF3A3-208ENST00000489537 A6NED7 52 aa3.32□□□□□ -1.88
SF3A3-208ENST00000489537 Q5VV11 94 aa3.32□□□□□ -1.88
SF3A3-208ENST00000489537 BRK1Q8WUW1 75 aa3.31□□□□□ -1.88
SF3A3-208ENST00000489537 UQCR11O14957 56 aa3.3□□□□□ -1.88
SF3A3-208ENST00000489537 H1FX-AS1Q4G0G2 97 aa3.29□□□□□ -1.88
SF3A3-208ENST00000489537 CDC42SE1Q9NRR8 79 aa3.28□□□□□ -1.88
SF3A3-208ENST00000489537 S4R3F8 94 aa3.27□□□□□ -1.89
SF3A3-208ENST00000489537 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
SF3A3-208ENST00000489537 MT3P25713 68 aa3.24□□□□□ -1.89
SF3A3-208ENST00000489537 MIR22HGQ0VDD5 57 aa3.23□□□□□ -1.89
SF3A3-208ENST00000489537 CSAG1Q6PB30 78 aa3.23□□□□□ -1.89
SF3A3-208ENST00000489537 SPATA8Q6RVD6 105 aa3.23□□□□□ -1.89
SF3A3-208ENST00000489537 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
SF3A3-208ENST00000489537 A0A1B0GU33 70 aa3.21□□□□□ -1.9
SF3A3-208ENST00000489537 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
SF3A3-208ENST00000489537 H0YAA0 97 aa3.2□□□□□ -1.9
SF3A3-208ENST00000489537 K7ERS5 55 aa3.2□□□□□ -1.9
SF3A3-208ENST00000489537 LCA10Q71F78 164 aa3.19□□□□□ -1.9
SF3A3-208ENST00000489537 PMAIP1Q13794 54 aa3.18□□□□□ -1.9
SF3A3-208ENST00000489537 KRTAP4-1Q9BYQ7 146 aa3.18□□□□□ -1.9
SF3A3-208ENST00000489537 M0QZ58 72 aa3.14□□□□□ -1.91
SF3A3-208ENST00000489537 FSIP2Q5CZC0 6907 aa3.12□□□□□ -1.91
SF3A3-208ENST00000489537 KRTAP19-2Q3LHN2 52 aa3.1□□□□□ -1.91
SF3A3-208ENST00000489537 ADM2Q7Z4H4 148 aa3.09□□□□□ -1.91
SF3A3-208ENST00000489537 A6NN06 94 aa3.08□□□□□ -1.92
SF3A3-208ENST00000489537 KTN1-AS1Q86SY8 53 aa3.08□□□□□ -1.92
SF3A3-208ENST00000489537 CRIPTQ9P021 101 aa3.07□□□□□ -1.92
SF3A3-208ENST00000489537 FLGP20930 4061 aaPredicted RBP3.06□□□□□ -1.92
SF3A3-208ENST00000489537 R4GN34 69 aa3.05□□□□□ -1.92
SF3A3-208ENST00000489537 A8MU10 97 aa3.03□□□□□ -1.92
SF3A3-208ENST00000489537 P0C880 135 aa3.02□□□□□ -1.93
SF3A3-208ENST00000489537 MT1HP80294 61 aa3.01□□□□□ -1.93
SF3A3-208ENST00000489537 CRCT1Q9UGL9 99 aa2.98□□□□□ -1.93
SF3A3-208ENST00000489537 A0A0D9SG42 100 aa2.96□□□□□ -1.94
SF3A3-208ENST00000489537 ROMO1P60602 79 aa2.96□□□□□ -1.94
SF3A3-208ENST00000489537 M0R2T5 61 aa2.95□□□□□ -1.94
SF3A3-208ENST00000489537 KRTAP13-4Q3LI77 160 aa2.94□□□□□ -1.94
SF3A3-208ENST00000489537 SPINT4Q6UDR6 99 aa2.94□□□□□ -1.94
SF3A3-208ENST00000489537 SSPOA2VEC9 5147 aa2.93□□□□□ -1.94
SF3A3-208ENST00000489537 KRTAP12-1P59990 96 aa2.92□□□□□ -1.94
SF3A3-208ENST00000489537 USH2AO75445 5202 aa2.91□□□□□ -1.94
SF3A3-208ENST00000489537 KRTAP10-5P60370 271 aa2.91□□□□□ -1.94
SF3A3-208ENST00000489537 LINC01554Q52M75 96 aa2.9□□□□□ -1.95
SF3A3-208ENST00000489537 KRTAP12-2P59991 146 aa2.88□□□□□ -1.95
SF3A3-208ENST00000489537 CAMK2N1Q7Z7J9 78 aa2.87□□□□□ -1.95
SF3A3-208ENST00000489537 KRTAP25-1Q3LHN0 102 aa2.86□□□□□ -1.95
SF3A3-208ENST00000489537 PLAC4Q8WY50 150 aa2.86□□□□□ -1.95
SF3A3-208ENST00000489537 SPRR2GQ9BYE4 73 aa2.85□□□□□ -1.95
SF3A3-208ENST00000489537 KRTAP10-10P60014 251 aa2.83□□□□□ -1.96
SF3A3-208ENST00000489537 FCGBPQ9Y6R7 5405 aaPredicted RBP2.82□□□□□ -1.96
SF3A3-208ENST00000489537 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
SF3A3-208ENST00000489537 PP632Q6XCG6 107 aa2.82□□□□□ -1.96
SF3A3-208ENST00000489537 PRAC1Q96KF2 57 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms