RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 TRRAPQ9Y4A5 3859 aa0.75□□□□□ -2.29
PRPF4-203ENST00000488937 KIAA1109Q2LD37 5005 aa0.74□□□□□ -2.29
PRPF4-203ENST00000488937 HERC1Q15751 4861 aa0.74□□□□□ -2.29
PRPF4-203ENST00000488937 DEFB109BQ30KR1 87 aa0.74□□□□□ -2.29
PRPF4-203ENST00000488937 FAT2Q9NYQ8 4349 aa0.74□□□□□ -2.29
PRPF4-203ENST00000488937 SRRM2Q9UQ35 2752 aaKnown RBP0.74□□□□□ -2.29
PRPF4-203ENST00000488937 MUC2Q02817 5179 aa0.74□□□□□ -2.29
PRPF4-203ENST00000488937 AKAP6Q13023 2319 aa0.73□□□□□ -2.29
PRPF4-203ENST00000488937 PRH1P02810 166 aa0.73□□□□□ -2.29
PRPF4-203ENST00000488937 PLNP26678 52 aa0.73□□□□□ -2.29
PRPF4-203ENST00000488937 SPINK6Q6UWN8 80 aa0.73□□□□□ -2.29
PRPF4-203ENST00000488937 U3KQA8 63 aa0.73□□□□□ -2.29
PRPF4-203ENST00000488937 ABCA13Q86UQ4 5058 aa0.73□□□□□ -2.29
PRPF4-203ENST00000488937 DNAH1Q9P2D7 4330 aa0.73□□□□□ -2.29
PRPF4-203ENST00000488937 DEFB130BP0DP73 79 aa0.72□□□□□ -2.29
PRPF4-203ENST00000488937 DEFB130AP0DP74 79 aa0.72□□□□□ -2.29
PRPF4-203ENST00000488937 TFF3Q07654 80 aa0.72□□□□□ -2.29
PRPF4-203ENST00000488937 MUC5BQ9HC84 5762 aaPredicted RBP0.71□□□□□ -2.3
PRPF4-203ENST00000488937 H0YGX0 51 aa0.71□□□□□ -2.3
PRPF4-203ENST00000488937 NEBP20929 6669 aa0.71□□□□□ -2.3
PRPF4-203ENST00000488937 WNK2Q9Y3S1 2297 aa0.71□□□□□ -2.3
PRPF4-203ENST00000488937 LINC01546A6NGU7 62 aa0.7□□□□□ -2.3
PRPF4-203ENST00000488937 IAPPP10997 89 aa0.7□□□□□ -2.3
PRPF4-203ENST00000488937 SYNE2Q8WXH0 6885 aaKnown RBP0.7□□□□□ -2.3
PRPF4-203ENST00000488937 HRNRQ86YZ3 2850 aaPredicted RBP0.7□□□□□ -2.3
PRPF4-203ENST00000488937 CMYA5Q8N3K9 4069 aa0.69□□□□□ -2.3
PRPF4-203ENST00000488937 DYNC2H1Q8NCM8 4307 aaKnown RBP0.69□□□□□ -2.3
PRPF4-203ENST00000488937 GPR98Q8WXG9 6306 aa0.69□□□□□ -2.3
PRPF4-203ENST00000488937 FAT4Q6V0I7 4981 aa0.69□□□□□ -2.3
PRPF4-203ENST00000488937 RNF213Q63HN8 5207 aa0.69□□□□□ -2.3
PRPF4-203ENST00000488937 SMIM27A0A1W2PRY6 76 aa0.68□□□□□ -2.3
PRPF4-203ENST00000488937 RPS27P42677 84 aaKnown RBP0.68□□□□□ -2.3
PRPF4-203ENST00000488937 MINOS1Q5TGZ0 78 aa0.68□□□□□ -2.3
PRPF4-203ENST00000488937 RPS27LQ71UM5 84 aaKnown RBP0.68□□□□□ -2.3
PRPF4-203ENST00000488937 ANK3Q12955 4377 aaKnown RBP0.68□□□□□ -2.3
PRPF4-203ENST00000488937 HECTD4Q9Y4D8 3996 aa0.67□□□□□ -2.3
PRPF4-203ENST00000488937 HMCN2Q8NDA2 5059 aa0.67□□□□□ -2.3
PRPF4-203ENST00000488937 SACSQ9NZJ4 4579 aa0.67□□□□□ -2.3
PRPF4-203ENST00000488937 TMEM167BQ9NRX6 74 aa0.67□□□□□ -2.3
PRPF4-203ENST00000488937 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
PRPF4-203ENST00000488937 HUWE1Q7Z6Z7 4374 aaKnown RBP0.66□□□□□ -2.3
PRPF4-203ENST00000488937 DEFB133Q30KQ1 61 aa0.66□□□□□ -2.3
PRPF4-203ENST00000488937 LINC00308Q8TCZ7 52 aa0.66□□□□□ -2.3
PRPF4-203ENST00000488937 C6orf48Q9UBA6 75 aa0.66□□□□□ -2.3
PRPF4-203ENST00000488937 MACF1Q9UPN3 7388 aaKnown RBP0.66□□□□□ -2.3
PRPF4-203ENST00000488937 LYSTQ99698 3801 aa0.66□□□□□ -2.3
PRPF4-203ENST00000488937 SSPOA2VEC9 5147 aa0.65□□□□□ -2.3
PRPF4-203ENST00000488937 TNXBP22105 4242 aa0.65□□□□□ -2.31
PRPF4-203ENST00000488937 PKHD1P08F94 4074 aa0.65□□□□□ -2.31
PRPF4-203ENST00000488937 DEFB108AA8MXU0 73 aa0.64□□□□□ -2.31
PRPF4-203ENST00000488937 STATHP02808 62 aa0.64□□□□□ -2.31
PRPF4-203ENST00000488937 ABRACLQ9P1F3 81 aa0.64□□□□□ -2.31
PRPF4-203ENST00000488937 AHNAKQ09666 5890 aaKnown RBP0.64□□□□□ -2.31
PRPF4-203ENST00000488937 MYCBP2O75592 4640 aa0.63□□□□□ -2.31
PRPF4-203ENST00000488937 SPINK1P00995 79 aa0.63□□□□□ -2.31
PRPF4-203ENST00000488937 WT1-ASQ06250 92 aa0.63□□□□□ -2.31
PRPF4-203ENST00000488937 TOMM5Q8N4H5 51 aa0.63□□□□□ -2.31
PRPF4-203ENST00000488937 HSPG2P98160 4391 aa0.63□□□□□ -2.31
PRPF4-203ENST00000488937 DNAH7Q8WXX0 4024 aa0.63□□□□□ -2.31
PRPF4-203ENST00000488937 DNAH9Q9NYC9 4486 aa0.62□□□□□ -2.31
PRPF4-203ENST00000488937 KMT2AQ03164 3969 aa0.62□□□□□ -2.31
PRPF4-203ENST00000488937 DNAH3Q8TD57 4116 aa0.62□□□□□ -2.31
PRPF4-203ENST00000488937 LRP1Q07954 4544 aaKnown RBP0.61□□□□□ -2.31
PRPF4-203ENST00000488937 DNAH11Q96DT5 4516 aa0.61□□□□□ -2.31
PRPF4-203ENST00000488937 COX14Q96I36 57 aa0.61□□□□□ -2.31
PRPF4-203ENST00000488937 LRP2P98164 4655 aa0.6□□□□□ -2.31
PRPF4-203ENST00000488937 APOBP04114 4563 aaKnown RBP0.6□□□□□ -2.31
PRPF4-203ENST00000488937 STARD9Q9P2P6 4700 aa0.6□□□□□ -2.31
PRPF4-203ENST00000488937 S4R3F8 94 aa0.59□□□□□ -2.31
PRPF4-203ENST00000488937 PLECQ15149 4684 aaKnown RBP0.58□□□□□ -2.32
PRPF4-203ENST00000488937 DNAH10Q8IVF4 4471 aa0.58□□□□□ -2.32
PRPF4-203ENST00000488937 PRM1P04553 51 aa0.58□□□□□ -2.32
PRPF4-203ENST00000488937 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
PRPF4-203ENST00000488937 DYNC1H1Q14204 4646 aaKnown RBP0.58□□□□□ -2.32
PRPF4-203ENST00000488937 LRP1BQ9NZR2 4599 aa0.57□□□□□ -2.32
PRPF4-203ENST00000488937 DNAH6Q9C0G6 4158 aa0.57□□□□□ -2.32
PRPF4-203ENST00000488937 DEFB104AQ8WTQ1 72 aa0.57□□□□□ -2.32
PRPF4-203ENST00000488937 DNAH17Q9UFH2 4485 aa0.57□□□□□ -2.32
PRPF4-203ENST00000488937 PKD1P98161 4303 aa0.57□□□□□ -2.32
PRPF4-203ENST00000488937 DSTQ03001 7570 aaKnown RBP0.57□□□□□ -2.32
PRPF4-203ENST00000488937 DNAH2Q9P225 4427 aa0.56□□□□□ -2.32
PRPF4-203ENST00000488937 USH2AO75445 5202 aa0.56□□□□□ -2.32
PRPF4-203ENST00000488937 M0R2T5 61 aa0.56□□□□□ -2.32
PRPF4-203ENST00000488937 PRLHP81277 87 aa0.56□□□□□ -2.32
PRPF4-203ENST00000488937 DEFB108BQ8NET1 73 aa0.56□□□□□ -2.32
PRPF4-203ENST00000488937 DNAH5Q8TE73 4624 aa0.56□□□□□ -2.32
PRPF4-203ENST00000488937 VPS13DQ5THJ4 4388 aa0.56□□□□□ -2.32
PRPF4-203ENST00000488937 SYNE1Q8NF91 8797 aaKnown RBP0.56□□□□□ -2.32
PRPF4-203ENST00000488937 VPS13BQ7Z7G8 4022 aa0.55□□□□□ -2.32
PRPF4-203ENST00000488937 DEFB135Q30KP9 77 aa0.55□□□□□ -2.32
PRPF4-203ENST00000488937 KRTAP20-1Q3LI63 56 aa0.55□□□□□ -2.32
PRPF4-203ENST00000488937 FAT1Q14517 4588 aa0.55□□□□□ -2.32
PRPF4-203ENST00000488937 KMT2DO14686 5537 aa0.55□□□□□ -2.32
PRPF4-203ENST00000488937 PKHD1L1Q86WI1 4243 aa0.54□□□□□ -2.32
PRPF4-203ENST00000488937 H0YGG7 62 aa0.53□□□□□ -2.32
PRPF4-203ENST00000488937 H3BUA1 57 aa0.53□□□□□ -2.32
PRPF4-203ENST00000488937 MT1HL1P0DM35 61 aa0.53□□□□□ -2.32
PRPF4-203ENST00000488937 DEFB106AQ8N104 65 aa0.53□□□□□ -2.32
PRPF4-203ENST00000488937 TIMM8BQ9Y5J9 83 aaPredicted RBP0.53□□□□□ -2.32
PRPF4-203ENST00000488937 FAT3Q8TDW7 4589 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms