RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 PRO2289Q9P1D8 64 aa8.11□□□□□ -1.11
GGPS1-206ENST00000488594 CYP4F30PQ9H0H9 118 aa8.07□□□□□ -1.12
GGPS1-206ENST00000488594 H0YAA0 97 aa8.06□□□□□ -1.12
GGPS1-206ENST00000488594 KRTAP2-2Q9BYT5 123 aa8.06□□□□□ -1.12
GGPS1-206ENST00000488594 KRTAP2-1Q9BYU5 128 aa8.06□□□□□ -1.12
GGPS1-206ENST00000488594 A0A087WVE0 104 aa8.05□□□□□ -1.12
GGPS1-206ENST00000488594 TAX1BP3O14907 124 aa8.04□□□□□ -1.12
GGPS1-206ENST00000488594 KRTAP8-1Q8IUC2 63 aa8.03□□□□□ -1.12
GGPS1-206ENST00000488594 SMIM6P0DI80 62 aa8.01□□□□□ -1.13
GGPS1-206ENST00000488594 LCE1AQ5T7P2 110 aa8.01□□□□□ -1.13
GGPS1-206ENST00000488594 H3BS24 57 aa8□□□□□ -1.13
GGPS1-206ENST00000488594 KRTAP4-8Q9BYQ9 185 aa8□□□□□ -1.13
GGPS1-206ENST00000488594 NDUFC1O43677 76 aa7.99□□□□□ -1.13
GGPS1-206ENST00000488594 MT1XP80297 61 aa7.99□□□□□ -1.13
GGPS1-206ENST00000488594 A8MUN3 132 aa7.98□□□□□ -1.13
GGPS1-206ENST00000488594 SPCS1Q9Y6A9 102 aa7.97□□□□□ -1.13
GGPS1-206ENST00000488594 LOC101927531A0A1B0GV80 90 aa7.96□□□□□ -1.14
GGPS1-206ENST00000488594 PLAC4Q8WY50 150 aa7.94□□□□□ -1.14
GGPS1-206ENST00000488594 TRAV22A0A0B4J277 110 aa7.93□□□□□ -1.14
GGPS1-206ENST00000488594 KRTAP12-2P59991 146 aa7.93□□□□□ -1.14
GGPS1-206ENST00000488594 ADM2Q7Z4H4 148 aa7.92□□□□□ -1.14
GGPS1-206ENST00000488594 SPRR2DP22532 72 aa7.91□□□□□ -1.14
GGPS1-206ENST00000488594 K7EP34 96 aa7.86□□□□□ -1.15
GGPS1-206ENST00000488594 PRO0461Q9UI25 63 aa7.86□□□□□ -1.15
GGPS1-206ENST00000488594 ACYP1P07311 99 aa7.82□□□□□ -1.16
GGPS1-206ENST00000488594 KRTAP4-8A0A0G2JLE6 195 aa7.78□□□□□ -1.16
GGPS1-206ENST00000488594 R4GN34 69 aa7.78□□□□□ -1.16
GGPS1-206ENST00000488594 ATOX1O00244 68 aa7.76□□□□□ -1.17
GGPS1-206ENST00000488594 UQCRQO14949 82 aa7.74□□□□□ -1.17
GGPS1-206ENST00000488594 LCE3BQ5TA77 95 aa7.73□□□□□ -1.17
GGPS1-206ENST00000488594 C20orf197Q8N268 126 aa7.72□□□□□ -1.17
GGPS1-206ENST00000488594 H0Y9P7 68 aa7.71□□□□□ -1.17
GGPS1-206ENST00000488594 COL5A1-AS1Q5SY13 56 aa7.68□□□□□ -1.18
GGPS1-206ENST00000488594 M0QZ58 72 aa7.67□□□□□ -1.18
GGPS1-206ENST00000488594 P0C880 135 aa7.65□□□□□ -1.18
GGPS1-206ENST00000488594 F8W1H4 67 aa7.61□□□□□ -1.19
GGPS1-206ENST00000488594 KRTAP10-7P60409 375 aaPredicted RBP7.61□□□□□ -1.19
GGPS1-206ENST00000488594 ETDBQ3ZM63 59 aa7.61□□□□□ -1.19
GGPS1-206ENST00000488594 KRTAP10-12P60413 245 aa7.6□□□□□ -1.19
GGPS1-206ENST00000488594 ATP5EP2Q5VTU8 51 aa7.59□□□□□ -1.19
GGPS1-206ENST00000488594 GTF2H5Q6ZYL4 71 aa7.59□□□□□ -1.19
GGPS1-206ENST00000488594 HIST1H4AP62805 103 aaKnown RBP7.59□□□□□ -1.2
GGPS1-206ENST00000488594 LINC01554Q52M75 96 aa7.59□□□□□ -1.2
GGPS1-206ENST00000488594 GPR98Q8WXG9 6306 aa7.58□□□□□ -1.2
GGPS1-206ENST00000488594 LINC00208Q96KT6 92 aa7.56□□□□□ -1.2
GGPS1-206ENST00000488594 KRTAP4-12Q9BQ66 201 aa7.52□□□□□ -1.21
GGPS1-206ENST00000488594 KRTAP9-9Q9BYP9 154 aa7.51□□□□□ -1.21
GGPS1-206ENST00000488594 KRTAP9-4Q9BYQ2 154 aa7.51□□□□□ -1.21
GGPS1-206ENST00000488594 LOC105371267A0A1B0GV96 52 aa7.48□□□□□ -1.21
GGPS1-206ENST00000488594 MP68P56378 58 aa7.47□□□□□ -1.21
GGPS1-206ENST00000488594 DSTQ03001 7570 aaKnown RBP7.47□□□□□ -1.21
GGPS1-206ENST00000488594 FAM240AA0A1B0GVK7 77 aa7.46□□□□□ -1.22
GGPS1-206ENST00000488594 DMAC1Q96GE9 116 aa7.41□□□□□ -1.22
GGPS1-206ENST00000488594 OCR1Q9BZK8 76 aa7.38□□□□□ -1.23
GGPS1-206ENST00000488594 MT-ATP8P03928 68 aa7.36□□□□□ -1.23
GGPS1-206ENST00000488594 H3BPC8 53 aa7.32□□□□□ -1.24
GGPS1-206ENST00000488594 LINC00643Q86TS7 51 aa7.32□□□□□ -1.24
GGPS1-206ENST00000488594 SVIPQ8NHG7 77 aa7.29□□□□□ -1.24
GGPS1-206ENST00000488594 KRTAP4-9Q9BYQ8 210 aa7.28□□□□□ -1.24
GGPS1-206ENST00000488594 TRAV7A0A075B6U4 112 aa7.26□□□□□ -1.25
GGPS1-206ENST00000488594 LCE5AQ5TCM9 118 aa7.25□□□□□ -1.25
GGPS1-206ENST00000488594 SPTSSBQ8NFR3 76 aa7.19□□□□□ -1.26
GGPS1-206ENST00000488594 KRTAP4-7Q9BYR0 210 aa7.18□□□□□ -1.26
GGPS1-206ENST00000488594 KRTAP19-3Q7Z4W3 81 aa7.17□□□□□ -1.26
GGPS1-206ENST00000488594 KRTAP19-7Q3SYF9 63 aa7.16□□□□□ -1.26
GGPS1-206ENST00000488594 ACYP2P14621 99 aa7.15□□□□□ -1.26
GGPS1-206ENST00000488594 MT1EP04732 61 aa7.13□□□□□ -1.27
GGPS1-206ENST00000488594 CAMK2N1Q7Z7J9 78 aa7.09□□□□□ -1.27
GGPS1-206ENST00000488594 SCGB1A1P11684 91 aa7.08□□□□□ -1.28
GGPS1-206ENST00000488594 LCE1DQ5T752 114 aa7.08□□□□□ -1.28
GGPS1-206ENST00000488594 PCP4L1A6NKN8 68 aa7.06□□□□□ -1.28
GGPS1-206ENST00000488594 CYSTM1Q9H1C7 97 aa7.04□□□□□ -1.28
GGPS1-206ENST00000488594 CHKB-CPT1BH3BT56 60 aa7.01□□□□□ -1.29
GGPS1-206ENST00000488594 LCE4AQ5TA78 99 aa6.98□□□□□ -1.29
GGPS1-206ENST00000488594 MT1GP13640 62 aa6.96□□□□□ -1.29
GGPS1-206ENST00000488594 KRTAP13-4Q3LI77 160 aa6.95□□□□□ -1.3
GGPS1-206ENST00000488594 MT4P47944 62 aa6.94□□□□□ -1.3
GGPS1-206ENST00000488594 PP632Q6XCG6 107 aa6.94□□□□□ -1.3
GGPS1-206ENST00000488594 HMCN1Q96RW7 5635 aa6.92□□□□□ -1.3
GGPS1-206ENST00000488594 KRTAP4-2Q9BYR5 136 aa6.92□□□□□ -1.3
GGPS1-206ENST00000488594 KRTAP19-4Q3LI73 84 aa6.91□□□□□ -1.3
GGPS1-206ENST00000488594 A0A0D9SG42 100 aa6.86□□□□□ -1.31
GGPS1-206ENST00000488594 KRTAP19-5Q3LI72 72 aa6.85□□□□□ -1.31
GGPS1-206ENST00000488594 J3QR89 54 aa6.81□□□□□ -1.32
GGPS1-206ENST00000488594 KRTAP5-10Q6L8G5 202 aa6.81□□□□□ -1.32
GGPS1-206ENST00000488594 MT1MQ8N339 61 aa6.81□□□□□ -1.32
GGPS1-206ENST00000488594 AHNAK2Q8IVF2 5795 aa6.8□□□□□ -1.32
GGPS1-206ENST00000488594 SMIM20Q8N5G0 67 aa6.79□□□□□ -1.32
GGPS1-206ENST00000488594 KRTAP5-4Q6L8H1 288 aa6.77□□□□□ -1.33
GGPS1-206ENST00000488594 MT1LQ93083 61 aa6.73□□□□□ -1.33
GGPS1-206ENST00000488594 SPANXA2-OT1Q8N9U9 137 aa6.69□□□□□ -1.34
GGPS1-206ENST00000488594 SPINT4Q6UDR6 99 aa6.66□□□□□ -1.34
GGPS1-206ENST00000488594 SNURFQ9Y675 71 aa6.66□□□□□ -1.34
GGPS1-206ENST00000488594 A0A1B0GV90 55 aa6.63□□□□□ -1.35
GGPS1-206ENST00000488594 KRTAP4-3Q9BYR4 195 aa6.63□□□□□ -1.35
GGPS1-206ENST00000488594 SEC61GP60059 68 aa6.62□□□□□ -1.35
GGPS1-206ENST00000488594 KRTAP4-11Q9BYQ6 195 aa6.62□□□□□ -1.35
GGPS1-206ENST00000488594 KRTAP23-1A1A580 65 aa6.61□□□□□ -1.35
GGPS1-206ENST00000488594 KRTAP5-7Q6L8G8 165 aa6.61□□□□□ -1.35
GGPS1-206ENST00000488594 SERP1Q9Y6X1 66 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms