RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 MYCBP2O75592 4640 aa7.44□□□□□ -1.22
COL16A1-214ENST00000488128 C10orf95Q9H7T3 257 aa7.43□□□□□ -1.22
COL16A1-214ENST00000488128 KRTAP13-4Q3LI77 160 aa7.43□□□□□ -1.22
COL16A1-214ENST00000488128 RYR2Q92736 4967 aa7.4□□□□□ -1.22
COL16A1-214ENST00000488128 RPS29P62273 56 aaKnown RBP7.4□□□□□ -1.22
COL16A1-214ENST00000488128 SPINT4Q6UDR6 99 aa7.4□□□□□ -1.23
COL16A1-214ENST00000488128 TPRXLQ17RH7 258 aa7.38□□□□□ -1.23
COL16A1-214ENST00000488128 RPL37P61927 97 aaKnown RBP7.37□□□□□ -1.23
COL16A1-214ENST00000488128 KRTAP10-6P60371 365 aaPredicted RBP7.35□□□□□ -1.23
COL16A1-214ENST00000488128 HSPG2P98160 4391 aa7.35□□□□□ -1.23
COL16A1-214ENST00000488128 LRP1Q07954 4544 aaKnown RBP7.33□□□□□ -1.24
COL16A1-214ENST00000488128 PKHD1L1Q86WI1 4243 aa7.32□□□□□ -1.24
COL16A1-214ENST00000488128 KRTAP3-3Q9BYR6 98 aa7.3□□□□□ -1.24
COL16A1-214ENST00000488128 KRTAP10-8P60410 259 aa7.26□□□□□ -1.25
COL16A1-214ENST00000488128 KRTAP3-2Q9BYR7 98 aa7.26□□□□□ -1.25
COL16A1-214ENST00000488128 NDUFAF8A1L188 74 aa7.23□□□□□ -1.25
COL16A1-214ENST00000488128 KRTAP12-2P59991 146 aa7.21□□□□□ -1.26
COL16A1-214ENST00000488128 Q5VSD8 79 aa7.19□□□□□ -1.26
COL16A1-214ENST00000488128 S4R3F8 94 aa7.18□□□□□ -1.26
COL16A1-214ENST00000488128 RYR3Q15413 4870 aa7.18□□□□□ -1.26
COL16A1-214ENST00000488128 FAT3Q8TDW7 4589 aa7.18□□□□□ -1.26
COL16A1-214ENST00000488128 LPAP08519 4548 aa7.17□□□□□ -1.26
COL16A1-214ENST00000488128 TNXBP22105 4242 aa7.16□□□□□ -1.26
COL16A1-214ENST00000488128 KRTAP17-1Q9BYP8 105 aa7.15□□□□□ -1.26
COL16A1-214ENST00000488128 KIAA1109Q2LD37 5005 aa7.1□□□□□ -1.27
COL16A1-214ENST00000488128 KRTAP15-1Q3LI76 137 aa7.09□□□□□ -1.27
COL16A1-214ENST00000488128 RYR1P21817 5038 aa7.08□□□□□ -1.28
COL16A1-214ENST00000488128 KRTAP12-1P59990 96 aa7.06□□□□□ -1.28
COL16A1-214ENST00000488128 XP32Q5T750 250 aa7.05□□□□□ -1.28
COL16A1-214ENST00000488128 LRP2P98164 4655 aa7.01□□□□□ -1.29
COL16A1-214ENST00000488128 MT1HL1P0DM35 61 aa6.96□□□□□ -1.29
COL16A1-214ENST00000488128 EPPK1P58107 5090 aaKnown RBP6.95□□□□□ -1.3
COL16A1-214ENST00000488128 ABCA13Q86UQ4 5058 aa6.86□□□□□ -1.31
COL16A1-214ENST00000488128 J3QL48 77 aa6.85□□□□□ -1.31
COL16A1-214ENST00000488128 M0QZ58 72 aa6.84□□□□□ -1.31
COL16A1-214ENST00000488128 KRTAP4-5Q9BYR2 181 aa6.81□□□□□ -1.32
COL16A1-214ENST00000488128 R4GN34 69 aa6.77□□□□□ -1.33
COL16A1-214ENST00000488128 LORP23490 312 aaPredicted RBP6.71□□□□□ -1.33
COL16A1-214ENST00000488128 PLAC4Q8WY50 150 aa6.69□□□□□ -1.34
COL16A1-214ENST00000488128 MUC2Q02817 5179 aa6.57□□□□□ -1.36
COL16A1-214ENST00000488128 HERC2O95714 4834 aa6.52□□□□□ -1.37
COL16A1-214ENST00000488128 KRTAP4-1Q9BYQ7 146 aa6.52□□□□□ -1.37
COL16A1-214ENST00000488128 LUZP6Q538Z0 58 aa6.51□□□□□ -1.37
COL16A1-214ENST00000488128 CAMK2N1Q7Z7J9 78 aa6.51□□□□□ -1.37
COL16A1-214ENST00000488128 SEC61BP60468 96 aaKnown RBP6.5□□□□□ -1.37
COL16A1-214ENST00000488128 A0A0A0MQY5 61 aa6.48□□□□□ -1.37
COL16A1-214ENST00000488128 MUC17Q685J3 4493 aa6.46□□□□□ -1.38
COL16A1-214ENST00000488128 LCE2DQ5TA82 110 aaPredicted RBP6.43□□□□□ -1.38
COL16A1-214ENST00000488128 BIRC6Q9NR09 4857 aa6.4□□□□□ -1.39
COL16A1-214ENST00000488128 KRTAP19-2Q3LHN2 52 aa6.31□□□□□ -1.4
COL16A1-214ENST00000488128 HERC1Q15751 4861 aa6.3□□□□□ -1.4
COL16A1-214ENST00000488128 PP632Q6XCG6 107 aa6.29□□□□□ -1.4
COL16A1-214ENST00000488128 PCLOQ9Y6V0 5065 aa6.27□□□□□ -1.41
COL16A1-214ENST00000488128 FAT4Q6V0I7 4981 aa6.19□□□□□ -1.42
COL16A1-214ENST00000488128 TNP1P09430 55 aa6.18□□□□□ -1.42
COL16A1-214ENST00000488128 FLGP20930 4061 aaPredicted RBP6.15□□□□□ -1.43
COL16A1-214ENST00000488128 HMCN2Q8NDA2 5059 aa6.14□□□□□ -1.43
COL16A1-214ENST00000488128 RNF213Q63HN8 5207 aa6.08□□□□□ -1.44
COL16A1-214ENST00000488128 UBR4Q5T4S7 5183 aa6.04□□□□□ -1.44
COL16A1-214ENST00000488128 SPRR5A0A1B0GTR4 108 aa5.99□□□□□ -1.45
COL16A1-214ENST00000488128 LCE2CQ5TA81 110 aa5.99□□□□□ -1.45
COL16A1-214ENST00000488128 M0R2T5 61 aa5.94□□□□□ -1.46
COL16A1-214ENST00000488128 LCE3AQ5TA76 89 aa5.9□□□□□ -1.46
COL16A1-214ENST00000488128 KRTAP23-1A1A580 65 aa5.86□□□□□ -1.47
COL16A1-214ENST00000488128 MT1HP80294 61 aa5.84□□□□□ -1.48
COL16A1-214ENST00000488128 KRTAP19-1Q8IUB9 90 aa5.81□□□□□ -1.48
COL16A1-214ENST00000488128 SPRR2GQ9BYE4 73 aa5.78□□□□□ -1.48
COL16A1-214ENST00000488128 KRTAP10-10P60014 251 aa5.77□□□□□ -1.49
COL16A1-214ENST00000488128 LCE2BO14633 110 aa5.76□□□□□ -1.49
COL16A1-214ENST00000488128 MT1FP04733 61 aa5.75□□□□□ -1.49
COL16A1-214ENST00000488128 MT2AP02795 61 aa5.73□□□□□ -1.49
COL16A1-214ENST00000488128 KRTAP9-8Q9BYQ0 159 aa5.69□□□□□ -1.5
COL16A1-214ENST00000488128 LCE2AQ5TA79 106 aaPredicted RBP5.65□□□□□ -1.5
COL16A1-214ENST00000488128 PRO2289Q9P1D8 64 aa5.65□□□□□ -1.5
COL16A1-214ENST00000488128 KRTAP8-1Q8IUC2 63 aa5.58□□□□□ -1.52
COL16A1-214ENST00000488128 KRTAP12-3P60328 96 aa5.55□□□□□ -1.52
COL16A1-214ENST00000488128 KMT2DO14686 5537 aa5.53□□□□□ -1.52
COL16A1-214ENST00000488128 MT1BP07438 61 aa5.51□□□□□ -1.53
COL16A1-214ENST00000488128 KRTAP10-5P60370 271 aa5.51□□□□□ -1.53
COL16A1-214ENST00000488128 KRTAP19-8Q3LI54 63 aa5.51□□□□□ -1.53
COL16A1-214ENST00000488128 KRTAP10-12P60413 245 aa5.49□□□□□ -1.53
COL16A1-214ENST00000488128 MT1XP80297 61 aa5.49□□□□□ -1.53
COL16A1-214ENST00000488128 INE1O15225 51 aa5.49□□□□□ -1.53
COL16A1-214ENST00000488128 KRTAP10-7P60409 375 aaPredicted RBP5.47□□□□□ -1.53
COL16A1-214ENST00000488128 USH2AO75445 5202 aa5.47□□□□□ -1.53
COL16A1-214ENST00000488128 KRTAP9-3Q9BYQ3 159 aa5.44□□□□□ -1.54
COL16A1-214ENST00000488128 KRTAP19-5Q3LI72 72 aa5.27□□□□□ -1.57
COL16A1-214ENST00000488128 LCE3CQ5T5A8 94 aa5.21□□□□□ -1.58
COL16A1-214ENST00000488128 KRTAP4-8A0A0G2JLE6 195 aa5.18□□□□□ -1.58
COL16A1-214ENST00000488128 KRTAP9-6A8MVA2 160 aa5.18□□□□□ -1.58
COL16A1-214ENST00000488128 KRTAP4-8Q9BYQ9 185 aa5.18□□□□□ -1.58
COL16A1-214ENST00000488128 KRTAP4-7Q9BYR0 210 aa5.14□□□□□ -1.59
COL16A1-214ENST00000488128 FSIP2Q5CZC0 6907 aa5.03□□□□□ -1.6
COL16A1-214ENST00000488128 KRTAP2-3P0C7H8 128 aa4.9□□□□□ -1.62
COL16A1-214ENST00000488128 KRTAP2-4Q9BYR9 128 aa4.9□□□□□ -1.62
COL16A1-214ENST00000488128 KRTAP2-1Q9BYU5 128 aa4.9□□□□□ -1.62
COL16A1-214ENST00000488128 SSPOA2VEC9 5147 aa4.9□□□□□ -1.62
COL16A1-214ENST00000488128 KRTAP19-7Q3SYF9 63 aa4.9□□□□□ -1.63
COL16A1-214ENST00000488128 DSTQ03001 7570 aaKnown RBP4.83□□□□□ -1.64
COL16A1-214ENST00000488128 LOC100996750A0A140TA64 210 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms