RNA–Protein interactions for RNA: ENST00000486934.1

TRA2A-207, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 417 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-207ENST00000486934 SMIM2Q9BVW6 85 aa-0.53□□□□□ -2.49
TRA2A-207ENST00000486934 CCDC168Q8NDH2 2452 aa-0.53□□□□□ -2.49
TRA2A-207ENST00000486934 PREX2Q70Z35 1606 aa-0.53□□□□□ -2.49
TRA2A-207ENST00000486934 SYCP2Q9BX26 1530 aa-0.54□□□□□ -2.5
TRA2A-207ENST00000486934 DNAH1Q9P2D7 4330 aa-0.54□□□□□ -2.5
TRA2A-207ENST00000486934 SPART-AS1P0CW21 52 aa-0.54□□□□□ -2.5
TRA2A-207ENST00000486934 MUC17Q685J3 4493 aa-0.54□□□□□ -2.5
TRA2A-207ENST00000486934 ABCA5Q8WWZ7 1642 aa-0.55□□□□□ -2.5
TRA2A-207ENST00000486934 SMR3BP02814 79 aaPredicted RBP-0.55□□□□□ -2.5
TRA2A-207ENST00000486934 A0A1B0GUL6 1792 aa-0.56□□□□□ -2.5
TRA2A-207ENST00000486934 DNAH2Q9P225 4427 aa-0.56□□□□□ -2.5
TRA2A-207ENST00000486934 WDR87Q6ZQQ6 2873 aa-0.57□□□□□ -2.5
TRA2A-207ENST00000486934 ABCC8Q09428 1581 aa-0.57□□□□□ -2.5
TRA2A-207ENST00000486934 FAM208AQ9UK61 1670 aaKnown RBP-0.58□□□□□ -2.5
TRA2A-207ENST00000486934 LINC01546A6NGU7 62 aa-0.58□□□□□ -2.5
TRA2A-207ENST00000486934 UBR4Q5T4S7 5183 aa-0.58□□□□□ -2.5
TRA2A-207ENST00000486934 ITPR3Q14573 2671 aa-0.6□□□□□ -2.5
TRA2A-207ENST00000486934 RELNP78509 3460 aa-0.61□□□□□ -2.51
TRA2A-207ENST00000486934 SPENQ96T58 3664 aaKnown RBP-0.61□□□□□ -2.51
TRA2A-207ENST00000486934 LMO7Q8WWI1 1683 aa-0.61□□□□□ -2.51
TRA2A-207ENST00000486934 SNRPGP15A8MWD9 76 aa-0.61□□□□□ -2.51
TRA2A-207ENST00000486934 TFF3Q07654 80 aa-0.61□□□□□ -2.51
TRA2A-207ENST00000486934 FANCD2Q9BXW9 1451 aa-0.61□□□□□ -2.51
TRA2A-207ENST00000486934 SPTBN5Q9NRC6 3674 aaKnown RBP-0.62□□□□□ -2.51
TRA2A-207ENST00000486934 TLN2Q9Y4G6 2542 aa-0.62□□□□□ -2.51
TRA2A-207ENST00000486934 DNAH8Q96JB1 4490 aa-0.62□□□□□ -2.51
TRA2A-207ENST00000486934 COL12A1Q99715 3063 aa-0.62□□□□□ -2.51
TRA2A-207ENST00000486934 TRPM2O94759 1503 aa-0.64□□□□□ -2.51
TRA2A-207ENST00000486934 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.64□□□□□ -2.51
TRA2A-207ENST00000486934 A0A0C4DFX4 3053 aa-0.64□□□□□ -2.51
TRA2A-207ENST00000486934 USH2AO75445 5202 aa-0.65□□□□□ -2.51
TRA2A-207ENST00000486934 USP9XQ93008 2570 aaPredicted RBP-0.65□□□□□ -2.51
TRA2A-207ENST00000486934 USP9YO00507 2555 aaPredicted RBP-0.66□□□□□ -2.51
TRA2A-207ENST00000486934 MT1EP04732 61 aa-0.66□□□□□ -2.52
TRA2A-207ENST00000486934 POLR2KP53803 58 aaKnown RBP-0.66□□□□□ -2.52
TRA2A-207ENST00000486934 COL6A5A8TX70 2615 aa-0.67□□□□□ -2.52
TRA2A-207ENST00000486934 FRYQ5TBA9 3013 aa-0.67□□□□□ -2.52
TRA2A-207ENST00000486934 CELSR3Q9NYQ7 3312 aa-0.68□□□□□ -2.52
TRA2A-207ENST00000486934 MT1XP80297 61 aa-0.69□□□□□ -2.52
TRA2A-207ENST00000486934 NRXN3Q9Y4C0 1643 aa-0.69□□□□□ -2.52
TRA2A-207ENST00000486934 HERC2O95714 4834 aa-0.7□□□□□ -2.52
TRA2A-207ENST00000486934 MROH2AA6NES4 1674 aa-0.71□□□□□ -2.52
TRA2A-207ENST00000486934 NDUFA1O15239 70 aa-0.71□□□□□ -2.52
TRA2A-207ENST00000486934 ITPR1Q14643 2758 aa-0.71□□□□□ -2.52
TRA2A-207ENST00000486934 MT1LQ93083 61 aa-0.72□□□□□ -2.52
TRA2A-207ENST00000486934 RYR1P21817 5038 aa-0.73□□□□□ -2.53
TRA2A-207ENST00000486934 DNAH7Q8WXX0 4024 aa-0.73□□□□□ -2.53
TRA2A-207ENST00000486934 PLECQ15149 4684 aaKnown RBP-0.73□□□□□ -2.53
TRA2A-207ENST00000486934 LAMA3Q16787 3333 aa-0.74□□□□□ -2.53
TRA2A-207ENST00000486934 CMYA5Q8N3K9 4069 aa-0.75□□□□□ -2.53
TRA2A-207ENST00000486934 EPPK1P58107 5090 aaKnown RBP-0.76□□□□□ -2.53
TRA2A-207ENST00000486934 DDX60Q8IY21 1712 aaKnown RBP-0.77□□□□□ -2.53
TRA2A-207ENST00000486934 C5orf42Q9H799 3197 aa-0.78□□□□□ -2.53
TRA2A-207ENST00000486934 IQGAP1P46940 1657 aa-0.78□□□□□ -2.53
TRA2A-207ENST00000486934 CLTCL1P53675 1640 aa-0.78□□□□□ -2.54
TRA2A-207ENST00000486934 CHD7Q9P2D1 2997 aa-0.79□□□□□ -2.54
TRA2A-207ENST00000486934 LEAP2Q969E1 77 aa-0.79□□□□□ -2.54
TRA2A-207ENST00000486934 SPTAN1Q13813 2472 aaKnown RBP-0.79□□□□□ -2.54
TRA2A-207ENST00000486934 LAMA2P24043 3122 aaKnown RBP-0.81□□□□□ -2.54
TRA2A-207ENST00000486934 NFAT5O94916 1531 aa-0.81□□□□□ -2.54
TRA2A-207ENST00000486934 DNHD1Q96M86 4753 aa-0.81□□□□□ -2.54
TRA2A-207ENST00000486934 ADGRG4Q8IZF6 3080 aa-0.82□□□□□ -2.54
TRA2A-207ENST00000486934 SRCAPQ6ZRS2 3230 aa-0.82□□□□□ -2.54
TRA2A-207ENST00000486934 TEX15Q9BXT5 2789 aa-0.82□□□□□ -2.54
TRA2A-207ENST00000486934 LRBAP50851 2863 aa-0.83□□□□□ -2.54
TRA2A-207ENST00000486934 MT1HL1P0DM35 61 aa-0.83□□□□□ -2.54
TRA2A-207ENST00000486934 DEFB136Q30KP8 78 aa-0.83□□□□□ -2.54
TRA2A-207ENST00000486934 TOMM5Q8N4H5 51 aa-0.83□□□□□ -2.54
TRA2A-207ENST00000486934 DYNC1H1Q14204 4646 aaKnown RBP-0.85□□□□□ -2.54
TRA2A-207ENST00000486934 BIRC6Q9NR09 4857 aa-0.85□□□□□ -2.55
TRA2A-207ENST00000486934 CSMD1Q96PZ7 3565 aa-0.86□□□□□ -2.55
TRA2A-207ENST00000486934 DNAH17Q9UFH2 4485 aa-0.86□□□□□ -2.55
TRA2A-207ENST00000486934 MGAQ8IWI9 3026 aa-0.87□□□□□ -2.55
TRA2A-207ENST00000486934 DOPEY1Q5JWR5 2465 aa-0.87□□□□□ -2.55
TRA2A-207ENST00000486934 MYO9AB2RTY4 2548 aa-0.87□□□□□ -2.55
TRA2A-207ENST00000486934 NEBP20929 6669 aa-0.87□□□□□ -2.55
TRA2A-207ENST00000486934 DNAH10Q8IVF4 4471 aa-0.88□□□□□ -2.55
TRA2A-207ENST00000486934 IQGAP2Q13576 1575 aa-0.91□□□□□ -2.55
TRA2A-207ENST00000486934 NIPBLQ6KC79 2804 aaeCLIP-0.91□□□□□ -2.56
TRA2A-207ENST00000486934 RNF213Q63HN8 5207 aa-0.93□□□□□ -2.56
TRA2A-207ENST00000486934 TRRAPQ9Y4A5 3859 aa-0.94□□□□□ -2.56
TRA2A-207ENST00000486934 ZFHX4Q86UP3 3567 aa-0.94□□□□□ -2.56
TRA2A-207ENST00000486934 CFAP46Q8IYW2 2715 aa-0.95□□□□□ -2.56
TRA2A-207ENST00000486934 HYDINQ4G0P3 5121 aa-0.95□□□□□ -2.56
TRA2A-207ENST00000486934 TOMM7Q9P0U1 55 aa-0.95□□□□□ -2.56
TRA2A-207ENST00000486934 DEFB4AO15263 64 aa-0.96□□□□□ -2.56
TRA2A-207ENST00000486934 MT2AP02795 61 aa-0.96□□□□□ -2.56
TRA2A-207ENST00000486934 MT1MQ8N339 61 aa-0.96□□□□□ -2.56
TRA2A-207ENST00000486934 EYSQ5T1H1 3165 aa-0.98□□□□□ -2.57
TRA2A-207ENST00000486934 MT1GP13640 62 aa-0.98□□□□□ -2.57
TRA2A-207ENST00000486934 LINC01590Q5TEZ4 76 aa-0.98□□□□□ -2.57
TRA2A-207ENST00000486934 SAMD9LQ8IVG5 1584 aa-1□□□□□ -2.57
TRA2A-207ENST00000486934 ATP7AQ04656 1500 aa-1□□□□□ -2.57
TRA2A-207ENST00000486934 CSMD2Q7Z408 3487 aa-1.01□□□□□ -2.57
TRA2A-207ENST00000486934 DMXL2Q8TDJ6 3036 aa-1.04□□□□□ -2.58
TRA2A-207ENST00000486934 CRYBG3Q68DQ2 2970 aa-1.04□□□□□ -2.58
TRA2A-207ENST00000486934 ITPR2Q14571 2701 aa-1.04□□□□□ -2.58
TRA2A-207ENST00000486934 SMG1Q96Q15 3661 aaKnown RBP-1.06□□□□□ -2.58
TRA2A-207ENST00000486934 CEP295Q9C0D2 2601 aa-1.06□□□□□ -2.58
TRA2A-207ENST00000486934 DNAH5Q8TE73 4624 aa-1.07□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms