RNA–Protein interactions for RNA: ENST00000486889.1

CTPS1-210, Transcript of CTP synthase 1, humanhuman

TSL 2

Gene CTPS1, Length 568 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-210ENST00000486889 KRTAP9-6A0A140TA67 174 aa4.86□□□□□ -1.63
CTPS1-210ENST00000486889 ACYP2P14621 99 aa4.86□□□□□ -1.63
CTPS1-210ENST00000486889 SPANXA2-OT1Q8N9U9 137 aa4.86□□□□□ -1.63
CTPS1-210ENST00000486889 S4R3F8 94 aa4.85□□□□□ -1.63
CTPS1-210ENST00000486889 KRTAP3-1Q9BYR8 98 aa4.84□□□□□ -1.63
CTPS1-210ENST00000486889 SPTSSBQ8NFR3 76 aa4.83□□□□□ -1.64
CTPS1-210ENST00000486889 KRTAP19-2Q3LHN2 52 aa4.82□□□□□ -1.64
CTPS1-210ENST00000486889 DMAC1Q96GE9 116 aa4.82□□□□□ -1.64
CTPS1-210ENST00000486889 CHKB-CPT1BH3BT56 60 aa4.81□□□□□ -1.64
CTPS1-210ENST00000486889 MT1HP80294 61 aa4.81□□□□□ -1.64
CTPS1-210ENST00000486889 CSAG1Q6PB30 78 aa4.81□□□□□ -1.64
CTPS1-210ENST00000486889 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
CTPS1-210ENST00000486889 ATP5EP56381 51 aaPredicted RBP4.78□□□□□ -1.64
CTPS1-210ENST00000486889 CCDC179H3BU77 68 aa4.76□□□□□ -1.65
CTPS1-210ENST00000486889 H7BZZ5 65 aa4.75□□□□□ -1.65
CTPS1-210ENST00000486889 LCA10Q71F78 164 aa4.75□□□□□ -1.65
CTPS1-210ENST00000486889 TMEM258P61165 79 aa4.72□□□□□ -1.65
CTPS1-210ENST00000486889 CRCT1Q9UGL9 99 aa4.72□□□□□ -1.65
CTPS1-210ENST00000486889 KRTAP10-6P60371 365 aaPredicted RBP4.69□□□□□ -1.66
CTPS1-210ENST00000486889 COA5Q86WW8 74 aa4.66□□□□□ -1.66
CTPS1-210ENST00000486889 SEC61GP60059 68 aa4.65□□□□□ -1.67
CTPS1-210ENST00000486889 CYSTM1Q9H1C7 97 aa4.65□□□□□ -1.67
CTPS1-210ENST00000486889 H0YAA0 97 aa4.63□□□□□ -1.67
CTPS1-210ENST00000486889 KRTAP10-10P60014 251 aa4.63□□□□□ -1.67
CTPS1-210ENST00000486889 FLGP20930 4061 aaPredicted RBP4.62□□□□□ -1.67
CTPS1-210ENST00000486889 SERP1Q9Y6X1 66 aa4.6□□□□□ -1.67
CTPS1-210ENST00000486889 CRIPTQ9P021 101 aa4.59□□□□□ -1.67
CTPS1-210ENST00000486889 ADM2Q7Z4H4 148 aa4.57□□□□□ -1.68
CTPS1-210ENST00000486889 KRTAP9-8Q9BYQ0 159 aa4.57□□□□□ -1.68
CTPS1-210ENST00000486889 FSIP2Q5CZC0 6907 aa4.57□□□□□ -1.68
CTPS1-210ENST00000486889 MT2AP02795 61 aa4.55□□□□□ -1.68
CTPS1-210ENST00000486889 PRR15LQ9BU68 103 aa4.54□□□□□ -1.68
CTPS1-210ENST00000486889 A0A1B0GU69 56 aa4.51□□□□□ -1.69
CTPS1-210ENST00000486889 R4GN34 69 aa4.51□□□□□ -1.69
CTPS1-210ENST00000486889 LOC100996750A0A140TA64 210 aa4.5□□□□□ -1.69
CTPS1-210ENST00000486889 MT1FP04733 61 aa4.5□□□□□ -1.69
CTPS1-210ENST00000486889 KRTAP4-6Q9BYQ5 205 aa4.5□□□□□ -1.69
CTPS1-210ENST00000486889 V9GYY9 64 aa4.5□□□□□ -1.69
CTPS1-210ENST00000486889 KRTAP19-1Q8IUB9 90 aa4.48□□□□□ -1.69
CTPS1-210ENST00000486889 M0QZ58 72 aa4.46□□□□□ -1.7
CTPS1-210ENST00000486889 RPS28P62857 69 aaKnown RBP4.45□□□□□ -1.7
CTPS1-210ENST00000486889 SMIM26A0A096LP01 95 aa4.43□□□□□ -1.7
CTPS1-210ENST00000486889 KRTAP9-7A8MTY7 169 aa4.43□□□□□ -1.7
CTPS1-210ENST00000486889 P0C880 135 aa4.42□□□□□ -1.7
CTPS1-210ENST00000486889 KRTAP9-3Q9BYQ3 159 aa4.42□□□□□ -1.7
CTPS1-210ENST00000486889 LINC01558Q9Y6Z2 57 aa4.42□□□□□ -1.7
CTPS1-210ENST00000486889 A0A1B0GU33 70 aa4.41□□□□□ -1.7
CTPS1-210ENST00000486889 LCE4AQ5TA78 99 aa4.4□□□□□ -1.71
CTPS1-210ENST00000486889 SPRR2GQ9BYE4 73 aa4.4□□□□□ -1.71
CTPS1-210ENST00000486889 KRTAP15-1Q3LI76 137 aa4.39□□□□□ -1.71
CTPS1-210ENST00000486889 Q5VV11 94 aa4.39□□□□□ -1.71
CTPS1-210ENST00000486889 KRTAP4-12Q9BQ66 201 aa4.38□□□□□ -1.71
CTPS1-210ENST00000486889 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.37□□□□□ -1.71
CTPS1-210ENST00000486889 Q1T7F1 81 aa4.36□□□□□ -1.71
CTPS1-210ENST00000486889 LINC01554Q52M75 96 aa4.36□□□□□ -1.71
CTPS1-210ENST00000486889 PLAC4Q8WY50 150 aa4.36□□□□□ -1.71
CTPS1-210ENST00000486889 USH2AO75445 5202 aa4.36□□□□□ -1.71
CTPS1-210ENST00000486889 KRTAP4-8Q9BYQ9 185 aa4.35□□□□□ -1.71
CTPS1-210ENST00000486889 UQCR11O14957 56 aa4.34□□□□□ -1.71
CTPS1-210ENST00000486889 KRTAP19-8Q3LI54 63 aa4.3□□□□□ -1.72
CTPS1-210ENST00000486889 A6NN06 94 aa4.29□□□□□ -1.72
CTPS1-210ENST00000486889 SSPOA2VEC9 5147 aa4.28□□□□□ -1.72
CTPS1-210ENST00000486889 PSPHP1O15172 72 aa4.28□□□□□ -1.72
CTPS1-210ENST00000486889 SPATA8Q6RVD6 105 aa4.26□□□□□ -1.73
CTPS1-210ENST00000486889 KRTAP9-4Q9BYQ2 154 aa4.26□□□□□ -1.73
CTPS1-210ENST00000486889 PRO2289Q9P1D8 64 aa4.26□□□□□ -1.73
CTPS1-210ENST00000486889 A0A0D9SG42 100 aa4.25□□□□□ -1.73
CTPS1-210ENST00000486889 K7ERS5 55 aa4.25□□□□□ -1.73
CTPS1-210ENST00000486889 KRTAP9-9Q9BYP9 154 aa4.25□□□□□ -1.73
CTPS1-210ENST00000486889 MIR22HGQ0VDD5 57 aa4.24□□□□□ -1.73
CTPS1-210ENST00000486889 FCGBPQ9Y6R7 5405 aaPredicted RBP4.23□□□□□ -1.73
CTPS1-210ENST00000486889 A6NED7 52 aa4.23□□□□□ -1.73
CTPS1-210ENST00000486889 CAMK2N1Q7Z7J9 78 aa4.23□□□□□ -1.73
CTPS1-210ENST00000486889 SPINT4Q6UDR6 99 aa4.21□□□□□ -1.74
CTPS1-210ENST00000486889 KRTAP13-4Q3LI77 160 aa4.2□□□□□ -1.74
CTPS1-210ENST00000486889 MT1BP07438 61 aa4.19□□□□□ -1.74
CTPS1-210ENST00000486889 LCE3BQ5TA77 95 aa4.19□□□□□ -1.74
CTPS1-210ENST00000486889 KRTAP19-6Q3LI70 58 aa4.17□□□□□ -1.74
CTPS1-210ENST00000486889 A8MU10 97 aa4.13□□□□□ -1.75
CTPS1-210ENST00000486889 KRTAP12-1P59990 96 aa4.11□□□□□ -1.75
CTPS1-210ENST00000486889 KRTAP10-5P60370 271 aa4.11□□□□□ -1.75
CTPS1-210ENST00000486889 CDC42SE1Q9NRR8 79 aa4.08□□□□□ -1.76
CTPS1-210ENST00000486889 KRTAP12-2P59991 146 aa4.07□□□□□ -1.76
CTPS1-210ENST00000486889 PRAC1Q96KF2 57 aa4.06□□□□□ -1.76
CTPS1-210ENST00000486889 KRTAP6-3Q3LI67 103 aa4.05□□□□□ -1.76
CTPS1-210ENST00000486889 MACF1Q9UPN3 7388 aaKnown RBP4.03□□□□□ -1.76
CTPS1-210ENST00000486889 MT1XP80297 61 aa4.02□□□□□ -1.77
CTPS1-210ENST00000486889 SYNE2Q8WXH0 6885 aaKnown RBP3.99□□□□□ -1.77
CTPS1-210ENST00000486889 LCE5AQ5TCM9 118 aa3.99□□□□□ -1.77
CTPS1-210ENST00000486889 BRK1Q8WUW1 75 aa3.99□□□□□ -1.77
CTPS1-210ENST00000486889 TNP1P09430 55 aa3.97□□□□□ -1.77
CTPS1-210ENST00000486889 LCE1DQ5T752 114 aa3.92□□□□□ -1.78
CTPS1-210ENST00000486889 KRTAP4-8A0A0G2JLE6 195 aa3.89□□□□□ -1.79
CTPS1-210ENST00000486889 KRTAP25-1Q3LHN0 102 aa3.89□□□□□ -1.79
CTPS1-210ENST00000486889 ROMO1P60602 79 aa3.88□□□□□ -1.79
CTPS1-210ENST00000486889 C10orf95Q9H7T3 257 aa3.87□□□□□ -1.79
CTPS1-210ENST00000486889 KRTAP10-12P60413 245 aa3.86□□□□□ -1.79
CTPS1-210ENST00000486889 KRTAP10-7P60409 375 aaPredicted RBP3.84□□□□□ -1.79
CTPS1-210ENST00000486889 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.79
CTPS1-210ENST00000486889 KRTAP8-1Q8IUC2 63 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms