RNA–Protein interactions for RNA: ENST00000486516.5

COMMD6-211, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-211ENST00000486516 LAMA1P25391 3075 aa-0.15□□□□□ -2.43
COMMD6-211ENST00000486516 RIF1Q5UIP0 2472 aaKnown RBP-0.15□□□□□ -2.43
COMMD6-211ENST00000486516 DNAH2Q9P225 4427 aa-0.15□□□□□ -2.43
COMMD6-211ENST00000486516 SMR3BP02814 79 aaPredicted RBP-0.15□□□□□ -2.43
COMMD6-211ENST00000486516 KRTAP19-8Q3LI54 63 aa-0.15□□□□□ -2.43
COMMD6-211ENST00000486516 TOMM5Q8N4H5 51 aa-0.15□□□□□ -2.43
COMMD6-211ENST00000486516 RANBP2P49792 3224 aaKnown RBP-0.15□□□□□ -2.43
COMMD6-211ENST00000486516 IQGAP2Q13576 1575 aa-0.15□□□□□ -2.43
COMMD6-211ENST00000486516 HTTP42858 3142 aa-0.16□□□□□ -2.43
COMMD6-211ENST00000486516 PCLOQ9Y6V0 5065 aa-0.16□□□□□ -2.43
COMMD6-211ENST00000486516 TRPM2O94759 1503 aa-0.16□□□□□ -2.43
COMMD6-211ENST00000486516 WDR87Q6ZQQ6 2873 aa-0.16□□□□□ -2.43
COMMD6-211ENST00000486516 NDUFA1O15239 70 aa-0.16□□□□□ -2.44
COMMD6-211ENST00000486516 MGAM2Q2M2H8 2515 aa-0.16□□□□□ -2.44
COMMD6-211ENST00000486516 MUC12Q9UKN1 5478 aa-0.16□□□□□ -2.44
COMMD6-211ENST00000486516 COL6A5A8TX70 2615 aa-0.17□□□□□ -2.44
COMMD6-211ENST00000486516 FAT1Q14517 4588 aa-0.17□□□□□ -2.44
COMMD6-211ENST00000486516 CLPSL2Q6UWE3 100 aa-0.17□□□□□ -2.44
COMMD6-211ENST00000486516 CCDC168Q8NDH2 2452 aa-0.17□□□□□ -2.44
COMMD6-211ENST00000486516 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.17□□□□□ -2.44
COMMD6-211ENST00000486516 CLTCL1P53675 1640 aa-0.17□□□□□ -2.44
COMMD6-211ENST00000486516 DNAH1Q9P2D7 4330 aa-0.17□□□□□ -2.44
COMMD6-211ENST00000486516 A0A0C4DFX4 3053 aa-0.18□□□□□ -2.44
COMMD6-211ENST00000486516 POLR2KP53803 58 aaKnown RBP-0.18□□□□□ -2.44
COMMD6-211ENST00000486516 STARD9Q9P2P6 4700 aa-0.18□□□□□ -2.44
COMMD6-211ENST00000486516 SPTBN5Q9NRC6 3674 aaKnown RBP-0.18□□□□□ -2.44
COMMD6-211ENST00000486516 TRIOO75962 3097 aa-0.19□□□□□ -2.44
COMMD6-211ENST00000486516 HERC1Q15751 4861 aa-0.19□□□□□ -2.44
COMMD6-211ENST00000486516 TLN2Q9Y4G6 2542 aa-0.19□□□□□ -2.44
COMMD6-211ENST00000486516 KMT2CQ8NEZ4 4911 aaKnown RBP-0.19□□□□□ -2.44
COMMD6-211ENST00000486516 CELSR3Q9NYQ7 3312 aa-0.2□□□□□ -2.44
COMMD6-211ENST00000486516 MUC17Q685J3 4493 aa-0.2□□□□□ -2.44
COMMD6-211ENST00000486516 DNAH8Q96JB1 4490 aa-0.2□□□□□ -2.44
COMMD6-211ENST00000486516 COL12A1Q99715 3063 aa-0.21□□□□□ -2.44
COMMD6-211ENST00000486516 USP9XQ93008 2570 aaPredicted RBP-0.21□□□□□ -2.44
COMMD6-211ENST00000486516 DEFB1P60022 68 aa-0.21□□□□□ -2.44
COMMD6-211ENST00000486516 MT1HP80294 61 aa-0.21□□□□□ -2.44
COMMD6-211ENST00000486516 ITPR3Q14573 2671 aa-0.21□□□□□ -2.44
COMMD6-211ENST00000486516 DNAH7Q8WXX0 4024 aa-0.22□□□□□ -2.44
COMMD6-211ENST00000486516 ATP7AQ04656 1500 aa-0.22□□□□□ -2.44
COMMD6-211ENST00000486516 UBR4Q5T4S7 5183 aa-0.22□□□□□ -2.44
COMMD6-211ENST00000486516 USP9YO00507 2555 aaPredicted RBP-0.23□□□□□ -2.45
COMMD6-211ENST00000486516 ITPR1Q14643 2758 aa-0.23□□□□□ -2.45
COMMD6-211ENST00000486516 SPART-AS1P0CW21 52 aa-0.23□□□□□ -2.45
COMMD6-211ENST00000486516 KRTAP20-2Q3LI61 65 aa-0.24□□□□□ -2.45
COMMD6-211ENST00000486516 SAMD9LQ8IVG5 1584 aa-0.24□□□□□ -2.45
COMMD6-211ENST00000486516 RELNP78509 3460 aa-0.26□□□□□ -2.45
COMMD6-211ENST00000486516 MT4P47944 62 aa-0.26□□□□□ -2.45
COMMD6-211ENST00000486516 ZFHX4Q86UP3 3567 aa-0.26□□□□□ -2.45
COMMD6-211ENST00000486516 C5orf42Q9H799 3197 aa-0.27□□□□□ -2.45
COMMD6-211ENST00000486516 DNAH10Q8IVF4 4471 aa-0.27□□□□□ -2.45
COMMD6-211ENST00000486516 USH2AO75445 5202 aa-0.27□□□□□ -2.45
COMMD6-211ENST00000486516 PLECQ15149 4684 aaKnown RBP-0.27□□□□□ -2.45
COMMD6-211ENST00000486516 CSMD1Q96PZ7 3565 aa-0.27□□□□□ -2.45
COMMD6-211ENST00000486516 TOP2AP11388 1531 aaKnown RBP-0.28□□□□□ -2.45
COMMD6-211ENST00000486516 MT1EP04732 61 aa-0.28□□□□□ -2.45
COMMD6-211ENST00000486516 NEBP20929 6669 aa-0.29□□□□□ -2.46
COMMD6-211ENST00000486516 FRYQ5TBA9 3013 aa-0.29□□□□□ -2.46
COMMD6-211ENST00000486516 CHD7Q9P2D1 2997 aa-0.29□□□□□ -2.46
COMMD6-211ENST00000486516 CMYA5Q8N3K9 4069 aa-0.29□□□□□ -2.46
COMMD6-211ENST00000486516 ADGRG4Q8IZF6 3080 aa-0.3□□□□□ -2.46
COMMD6-211ENST00000486516 DNAH17Q9UFH2 4485 aa-0.3□□□□□ -2.46
COMMD6-211ENST00000486516 RPL39P62891 51 aaKnown RBP-0.3□□□□□ -2.46
COMMD6-211ENST00000486516 MT1XP80297 61 aa-0.3□□□□□ -2.46
COMMD6-211ENST00000486516 MT1LQ93083 61 aa-0.3□□□□□ -2.46
COMMD6-211ENST00000486516 DYNC1H1Q14204 4646 aaKnown RBP-0.3□□□□□ -2.46
COMMD6-211ENST00000486516 MGAQ8IWI9 3026 aa-0.3□□□□□ -2.46
COMMD6-211ENST00000486516 SPTAN1Q13813 2472 aaKnown RBP-0.3□□□□□ -2.46
COMMD6-211ENST00000486516 CRYBG3Q68DQ2 2970 aa-0.3□□□□□ -2.46
COMMD6-211ENST00000486516 LEAP2Q969E1 77 aa-0.31□□□□□ -2.46
COMMD6-211ENST00000486516 TEX15Q9BXT5 2789 aa-0.31□□□□□ -2.46
COMMD6-211ENST00000486516 HERC2O95714 4834 aa-0.32□□□□□ -2.46
COMMD6-211ENST00000486516 LAMA3Q16787 3333 aa-0.32□□□□□ -2.46
COMMD6-211ENST00000486516 DNHD1Q96M86 4753 aa-0.33□□□□□ -2.46
COMMD6-211ENST00000486516 RYR1P21817 5038 aa-0.33□□□□□ -2.46
COMMD6-211ENST00000486516 DOPEY1Q5JWR5 2465 aa-0.33□□□□□ -2.46
COMMD6-211ENST00000486516 TOMM7Q9P0U1 55 aa-0.33□□□□□ -2.46
COMMD6-211ENST00000486516 EPPK1P58107 5090 aaKnown RBP-0.33□□□□□ -2.46
COMMD6-211ENST00000486516 TRRAPQ9Y4A5 3859 aa-0.34□□□□□ -2.46
COMMD6-211ENST00000486516 RPL39LQ96EH5 51 aaKnown RBP-0.34□□□□□ -2.46
COMMD6-211ENST00000486516 SRCAPQ6ZRS2 3230 aa-0.35□□□□□ -2.47
COMMD6-211ENST00000486516 MROH2BQ7Z745 1585 aa-0.35□□□□□ -2.47
COMMD6-211ENST00000486516 DUOX1Q9NRD9 1551 aa-0.35□□□□□ -2.47
COMMD6-211ENST00000486516 LRBAP50851 2863 aa-0.35□□□□□ -2.47
COMMD6-211ENST00000486516 LAMA2P24043 3122 aaKnown RBP-0.36□□□□□ -2.47
COMMD6-211ENST00000486516 CFAP46Q8IYW2 2715 aa-0.37□□□□□ -2.47
COMMD6-211ENST00000486516 MYO9AB2RTY4 2548 aa-0.37□□□□□ -2.47
COMMD6-211ENST00000486516 SMG1Q96Q15 3661 aaKnown RBP-0.37□□□□□ -2.47
COMMD6-211ENST00000486516 DEFB136Q30KP8 78 aa-0.38□□□□□ -2.47
COMMD6-211ENST00000486516 BIRC6Q9NR09 4857 aa-0.38□□□□□ -2.47
COMMD6-211ENST00000486516 MT1GP13640 62 aa-0.39□□□□□ -2.47
COMMD6-211ENST00000486516 SNRPGP62308 76 aaKnown RBP-0.39□□□□□ -2.47
COMMD6-211ENST00000486516 RYR3Q15413 4870 aa-0.39□□□□□ -2.47
COMMD6-211ENST00000486516 DEFB4AO15263 64 aa-0.4□□□□□ -2.47
COMMD6-211ENST00000486516 LINC01590Q5TEZ4 76 aa-0.4□□□□□ -2.47
COMMD6-211ENST00000486516 DMXL2Q8TDJ6 3036 aa-0.4□□□□□ -2.47
COMMD6-211ENST00000486516 NIPBLQ6KC79 2804 aaeCLIP-0.41□□□□□ -2.47
COMMD6-211ENST00000486516 DNAH5Q8TE73 4624 aa-0.41□□□□□ -2.47
COMMD6-211ENST00000486516 VPS13CQ709C8 3753 aa-0.41□□□□□ -2.48
COMMD6-211ENST00000486516 EYSQ5T1H1 3165 aa-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms