RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 SNURFQ9Y675 71 aa11.14□□□□□ -0.63
ABCF3-216ENST00000485921 C20orf197Q8N268 126 aa11.1□□□□□ -0.63
ABCF3-216ENST00000485921 DMAC1Q96GE9 116 aa11.09□□□□□ -0.63
ABCF3-216ENST00000485921 NDUFC1O43677 76 aa11.06□□□□□ -0.64
ABCF3-216ENST00000485921 KRTAP9-3Q9BYQ3 159 aa11.05□□□□□ -0.64
ABCF3-216ENST00000485921 COX7CP15954 63 aa11□□□□□ -0.65
ABCF3-216ENST00000485921 ACYP2P14621 99 aa10.93□□□□□ -0.66
ABCF3-216ENST00000485921 SPANXA2-OT1Q8N9U9 137 aa10.9□□□□□ -0.66
ABCF3-216ENST00000485921 LCE2BO14633 110 aa10.89□□□□□ -0.67
ABCF3-216ENST00000485921 ANAPC13Q9BS18 74 aa10.88□□□□□ -0.67
ABCF3-216ENST00000485921 FSIP2Q5CZC0 6907 aa10.87□□□□□ -0.67
ABCF3-216ENST00000485921 CRCT1Q9UGL9 99 aa10.83□□□□□ -0.68
ABCF3-216ENST00000485921 USH2AO75445 5202 aa10.81□□□□□ -0.68
ABCF3-216ENST00000485921 KRTAP9-6A0A140TA67 174 aa10.81□□□□□ -0.68
ABCF3-216ENST00000485921 H0YAA0 97 aa10.81□□□□□ -0.68
ABCF3-216ENST00000485921 CYSTM1Q9H1C7 97 aa10.76□□□□□ -0.69
ABCF3-216ENST00000485921 CHKB-CPT1BH3BT56 60 aa10.74□□□□□ -0.69
ABCF3-216ENST00000485921 ADM2Q7Z4H4 148 aa10.74□□□□□ -0.69
ABCF3-216ENST00000485921 H7BZZ5 65 aa10.72□□□□□ -0.69
ABCF3-216ENST00000485921 KRTAP19-1Q8IUB9 90 aa10.7□□□□□ -0.7
ABCF3-216ENST00000485921 SPTSSBQ8NFR3 76 aa10.7□□□□□ -0.7
ABCF3-216ENST00000485921 CRIPTQ9P021 101 aa10.66□□□□□ -0.7
ABCF3-216ENST00000485921 CCDC179H3BU77 68 aa10.65□□□□□ -0.7
ABCF3-216ENST00000485921 SPRR2GQ9BYE4 73 aa10.65□□□□□ -0.7
ABCF3-216ENST00000485921 SSPOA2VEC9 5147 aa10.61□□□□□ -0.71
ABCF3-216ENST00000485921 COA5Q86WW8 74 aa10.57□□□□□ -0.72
ABCF3-216ENST00000485921 P0C880 135 aa10.55□□□□□ -0.72
ABCF3-216ENST00000485921 KRTAP3-2Q9BYR7 98 aa10.55□□□□□ -0.72
ABCF3-216ENST00000485921 KRTAP19-8Q3LI54 63 aa10.5□□□□□ -0.73
ABCF3-216ENST00000485921 Q5VV11 94 aa10.47□□□□□ -0.73
ABCF3-216ENST00000485921 MT1BP07438 61 aa10.44□□□□□ -0.74
ABCF3-216ENST00000485921 KRTAP19-6Q3LI70 58 aa10.41□□□□□ -0.74
ABCF3-216ENST00000485921 R4GN34 69 aa10.41□□□□□ -0.74
ABCF3-216ENST00000485921 M0QZ58 72 aa10.36□□□□□ -0.75
ABCF3-216ENST00000485921 ATP5EP56381 51 aaPredicted RBP10.35□□□□□ -0.75
ABCF3-216ENST00000485921 FCGBPQ9Y6R7 5405 aaPredicted RBP10.3□□□□□ -0.76
ABCF3-216ENST00000485921 TMEM258P61165 79 aa10.26□□□□□ -0.77
ABCF3-216ENST00000485921 SEC61GP60059 68 aa10.21□□□□□ -0.77
ABCF3-216ENST00000485921 LINC01554Q52M75 96 aa10.19□□□□□ -0.78
ABCF3-216ENST00000485921 SERP1Q9Y6X1 66 aa10.18□□□□□ -0.78
ABCF3-216ENST00000485921 PLAC4Q8WY50 150 aa10.14□□□□□ -0.79
ABCF3-216ENST00000485921 A6NN06 94 aa10.13□□□□□ -0.79
ABCF3-216ENST00000485921 KRTAP10-5P60370 271 aa10.1□□□□□ -0.79
ABCF3-216ENST00000485921 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.05□□□□□ -0.8
ABCF3-216ENST00000485921 KRTAP13-4Q3LI77 160 aa10.05□□□□□ -0.8
ABCF3-216ENST00000485921 A0A1B0GU69 56 aa10.03□□□□□ -0.8
ABCF3-216ENST00000485921 A0A1B0GU33 70 aa9.99□□□□□ -0.81
ABCF3-216ENST00000485921 MACF1Q9UPN3 7388 aaKnown RBP9.93□□□□□ -0.82
ABCF3-216ENST00000485921 PCP4P48539 62 aa9.93□□□□□ -0.82
ABCF3-216ENST00000485921 MT1XP80297 61 aa9.91□□□□□ -0.82
ABCF3-216ENST00000485921 PRO2289Q9P1D8 64 aa9.91□□□□□ -0.82
ABCF3-216ENST00000485921 SPATA8Q6RVD6 105 aa9.9□□□□□ -0.82
ABCF3-216ENST00000485921 LINC01558Q9Y6Z2 57 aa9.89□□□□□ -0.83
ABCF3-216ENST00000485921 PRR15LQ9BU68 103 aa9.87□□□□□ -0.83
ABCF3-216ENST00000485921 A0A0D9SG42 100 aa9.82□□□□□ -0.84
ABCF3-216ENST00000485921 KRTAP9-7A8MTY7 169 aa9.78□□□□□ -0.84
ABCF3-216ENST00000485921 SMIM26A0A096LP01 95 aa9.7□□□□□ -0.86
ABCF3-216ENST00000485921 SYNE2Q8WXH0 6885 aaKnown RBP9.69□□□□□ -0.86
ABCF3-216ENST00000485921 CAMK2N1Q7Z7J9 78 aa9.66□□□□□ -0.86
ABCF3-216ENST00000485921 SPINT4Q6UDR6 99 aa9.65□□□□□ -0.86
ABCF3-216ENST00000485921 A8MU10 97 aa9.63□□□□□ -0.87
ABCF3-216ENST00000485921 KRTAP12-1P59990 96 aa9.62□□□□□ -0.87
ABCF3-216ENST00000485921 V9GYY9 64 aa9.62□□□□□ -0.87
ABCF3-216ENST00000485921 Q1T7F1 81 aa9.58□□□□□ -0.88
ABCF3-216ENST00000485921 KRTAP6-3Q3LI67 103 aa9.57□□□□□ -0.88
ABCF3-216ENST00000485921 KRTAP12-2P59991 146 aa9.56□□□□□ -0.88
ABCF3-216ENST00000485921 UQCR11O14957 56 aa9.55□□□□□ -0.88
ABCF3-216ENST00000485921 RPS28P62857 69 aaKnown RBP9.53□□□□□ -0.88
ABCF3-216ENST00000485921 PSPHP1O15172 72 aa9.5□□□□□ -0.89
ABCF3-216ENST00000485921 KRTAP10-7P60409 375 aaPredicted RBP9.47□□□□□ -0.89
ABCF3-216ENST00000485921 KMT2DO14686 5537 aa9.42□□□□□ -0.9
ABCF3-216ENST00000485921 KRTAP10-12P60413 245 aa9.41□□□□□ -0.9
ABCF3-216ENST00000485921 MIR22HGQ0VDD5 57 aa9.39□□□□□ -0.91
ABCF3-216ENST00000485921 KRTAP4-8A0A0G2JLE6 195 aa9.33□□□□□ -0.92
ABCF3-216ENST00000485921 KRTAP5-9P26371 169 aa9.33□□□□□ -0.92
ABCF3-216ENST00000485921 KRTAP4-8Q9BYQ9 185 aa9.33□□□□□ -0.92
ABCF3-216ENST00000485921 KRTAP8-1Q8IUC2 63 aa9.32□□□□□ -0.92
ABCF3-216ENST00000485921 A6NED7 52 aa9.2□□□□□ -0.94
ABCF3-216ENST00000485921 SPRR2FQ96RM1 72 aa9.19□□□□□ -0.94
ABCF3-216ENST00000485921 MUC12Q9UKN1 5478 aa9.19□□□□□ -0.94
ABCF3-216ENST00000485921 C10orf95Q9H7T3 257 aa9.16□□□□□ -0.94
ABCF3-216ENST00000485921 K7ERS5 55 aa9.11□□□□□ -0.95
ABCF3-216ENST00000485921 NEBP20929 6669 aa9.09□□□□□ -0.95
ABCF3-216ENST00000485921 TNP1P09430 55 aa9.04□□□□□ -0.96
ABCF3-216ENST00000485921 MDN1Q9NU22 5596 aa9□□□□□ -0.97
ABCF3-216ENST00000485921 SPRR2EP22531 72 aa8.94□□□□□ -0.98
ABCF3-216ENST00000485921 SPRR2BP35325 72 aa8.94□□□□□ -0.98
ABCF3-216ENST00000485921 SPRR2AP35326 72 aa8.94□□□□□ -0.98
ABCF3-216ENST00000485921 CDC42SE1Q9NRR8 79 aa8.89□□□□□ -0.99
ABCF3-216ENST00000485921 LCE1AQ5T7P2 110 aa8.88□□□□□ -0.99
ABCF3-216ENST00000485921 KRTAP19-7Q3SYF9 63 aa8.84□□□□□ -0.99
ABCF3-216ENST00000485921 LCE3AQ5TA76 89 aa8.82□□□□□ -1
ABCF3-216ENST00000485921 KRTAP25-1Q3LHN0 102 aa8.77□□□□□ -1.01
ABCF3-216ENST00000485921 KRTAP19-5Q3LI72 72 aa8.77□□□□□ -1.01
ABCF3-216ENST00000485921 MT1EP04732 61 aa8.75□□□□□ -1.01
ABCF3-216ENST00000485921 SPRR2DP22532 72 aa8.63□□□□□ -1.03
ABCF3-216ENST00000485921 KRTAP20-1Q3LI63 56 aa8.63□□□□□ -1.03
ABCF3-216ENST00000485921 ROMO1P60602 79 aa8.6□□□□□ -1.03
ABCF3-216ENST00000485921 KRTAP19-3Q7Z4W3 81 aa8.57□□□□□ -1.04
ABCF3-216ENST00000485921 KRTAP2-3P0C7H8 128 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms