RNA–Protein interactions for RNA: ENST00000484074.5

FNDC3A-203, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best)

Gene FNDC3A, Length 6,082 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-203ENST00000484074 INE1O15225 51 aa1.89□□□□□ -2.11
FNDC3A-203ENST00000484074 KRTAP10-6P60371 365 aaPredicted RBP1.89□□□□□ -2.11
FNDC3A-203ENST00000484074 FRAS1Q86XX4 4008 aa1.89□□□□□ -2.11
FNDC3A-203ENST00000484074 PRKDCP78527 4128 aaKnown RBP1.89□□□□□ -2.11
FNDC3A-203ENST00000484074 LORP23490 312 aaPredicted RBP1.89□□□□□ -2.11
FNDC3A-203ENST00000484074 TRRAPQ9Y4A5 3859 aa1.88□□□□□ -2.11
FNDC3A-203ENST00000484074 LCE2DQ5TA82 110 aaPredicted RBP1.88□□□□□ -2.11
FNDC3A-203ENST00000484074 KRTAP10-12P60413 245 aa1.87□□□□□ -2.11
FNDC3A-203ENST00000484074 DNAH6Q9C0G6 4158 aa1.87□□□□□ -2.11
FNDC3A-203ENST00000484074 HRNRQ86YZ3 2850 aaPredicted RBP1.86□□□□□ -2.11
FNDC3A-203ENST00000484074 RYR3Q15413 4870 aa1.86□□□□□ -2.11
FNDC3A-203ENST00000484074 MEGF8Q7Z7M0 2845 aa1.85□□□□□ -2.11
FNDC3A-203ENST00000484074 LCE2CQ5TA81 110 aa1.85□□□□□ -2.11
FNDC3A-203ENST00000484074 KRTAP8-1Q8IUC2 63 aa1.85□□□□□ -2.11
FNDC3A-203ENST00000484074 KRTAP3-1Q9BYR8 98 aa1.84□□□□□ -2.11
FNDC3A-203ENST00000484074 KRTAP12-1P59990 96 aa1.82□□□□□ -2.12
FNDC3A-203ENST00000484074 COL7A1Q02388 2944 aa1.82□□□□□ -2.12
FNDC3A-203ENST00000484074 FAT2Q9NYQ8 4349 aa1.82□□□□□ -2.12
FNDC3A-203ENST00000484074 PKHD1P08F94 4074 aa1.79□□□□□ -2.12
FNDC3A-203ENST00000484074 DNAH9Q9NYC9 4486 aa1.79□□□□□ -2.12
FNDC3A-203ENST00000484074 KMT2CQ8NEZ4 4911 aaKnown RBP1.79□□□□□ -2.12
FNDC3A-203ENST00000484074 SACSQ9NZJ4 4579 aa1.78□□□□□ -2.12
FNDC3A-203ENST00000484074 RYR2Q92736 4967 aa1.78□□□□□ -2.12
FNDC3A-203ENST00000484074 ALMS1Q8TCU4 4167 aa1.78□□□□□ -2.12
FNDC3A-203ENST00000484074 KRTAP10-5P60370 271 aa1.78□□□□□ -2.12
FNDC3A-203ENST00000484074 HYDINQ4G0P3 5121 aa1.77□□□□□ -2.13
FNDC3A-203ENST00000484074 PKHD1L1Q86WI1 4243 aa1.77□□□□□ -2.13
FNDC3A-203ENST00000484074 KMT2AQ03164 3969 aa1.77□□□□□ -2.13
FNDC3A-203ENST00000484074 LCE2BO14633 110 aa1.77□□□□□ -2.13
FNDC3A-203ENST00000484074 KRTAP12-3P60328 96 aa1.77□□□□□ -2.13
FNDC3A-203ENST00000484074 KRTAP4-5Q9BYR2 181 aa1.77□□□□□ -2.13
FNDC3A-203ENST00000484074 MT1HL1P0DM35 61 aa1.77□□□□□ -2.13
FNDC3A-203ENST00000484074 KRTAP10-7P60409 375 aaPredicted RBP1.77□□□□□ -2.13
FNDC3A-203ENST00000484074 VPS13DQ5THJ4 4388 aa1.76□□□□□ -2.13
FNDC3A-203ENST00000484074 HUWE1Q7Z6Z7 4374 aaKnown RBP1.76□□□□□ -2.13
FNDC3A-203ENST00000484074 FAT3Q8TDW7 4589 aa1.76□□□□□ -2.13
FNDC3A-203ENST00000484074 LCE2AQ5TA79 106 aaPredicted RBP1.76□□□□□ -2.13
FNDC3A-203ENST00000484074 DNAH2Q9P225 4427 aa1.74□□□□□ -2.13
FNDC3A-203ENST00000484074 EPPK1P58107 5090 aaKnown RBP1.73□□□□□ -2.13
FNDC3A-203ENST00000484074 VPS13BQ7Z7G8 4022 aa1.73□□□□□ -2.13
FNDC3A-203ENST00000484074 PKD1P98161 4303 aa1.73□□□□□ -2.13
FNDC3A-203ENST00000484074 SPRR2FQ96RM1 72 aa1.72□□□□□ -2.13
FNDC3A-203ENST00000484074 KRTAP19-4Q3LI73 84 aa1.72□□□□□ -2.13
FNDC3A-203ENST00000484074 LCE3AQ5TA76 89 aa1.71□□□□□ -2.14
FNDC3A-203ENST00000484074 DNAH17Q9UFH2 4485 aa1.7□□□□□ -2.14
FNDC3A-203ENST00000484074 BIRC6Q9NR09 4857 aa1.7□□□□□ -2.14
FNDC3A-203ENST00000484074 STARD9Q9P2P6 4700 aa1.69□□□□□ -2.14
FNDC3A-203ENST00000484074 DNAH10Q8IVF4 4471 aa1.69□□□□□ -2.14
FNDC3A-203ENST00000484074 SPRR2EP22531 72 aa1.68□□□□□ -2.14
FNDC3A-203ENST00000484074 SPRR2BP35325 72 aa1.68□□□□□ -2.14
FNDC3A-203ENST00000484074 SPRR2AP35326 72 aa1.68□□□□□ -2.14
FNDC3A-203ENST00000484074 HERC2O95714 4834 aa1.68□□□□□ -2.14
FNDC3A-203ENST00000484074 DYNC1H1Q14204 4646 aaKnown RBP1.66□□□□□ -2.14
FNDC3A-203ENST00000484074 KIAA1109Q2LD37 5005 aa1.66□□□□□ -2.14
FNDC3A-203ENST00000484074 MT3P25713 68 aa1.65□□□□□ -2.15
FNDC3A-203ENST00000484074 DNAH11Q96DT5 4516 aa1.65□□□□□ -2.15
FNDC3A-203ENST00000484074 RYR1P21817 5038 aa1.64□□□□□ -2.15
FNDC3A-203ENST00000484074 SPRR2DP22532 72 aa1.64□□□□□ -2.15
FNDC3A-203ENST00000484074 KRTAP10-4P60372 401 aaPredicted RBP1.64□□□□□ -2.15
FNDC3A-203ENST00000484074 PCLOQ9Y6V0 5065 aa1.63□□□□□ -2.15
FNDC3A-203ENST00000484074 MT1HP80294 61 aa1.63□□□□□ -2.15
FNDC3A-203ENST00000484074 PLECQ15149 4684 aaKnown RBP1.62□□□□□ -2.15
FNDC3A-203ENST00000484074 HSPG2P98160 4391 aa1.62□□□□□ -2.15
FNDC3A-203ENST00000484074 ABCA13Q86UQ4 5058 aa1.62□□□□□ -2.15
FNDC3A-203ENST00000484074 SPRR5A0A1B0GTR4 108 aa1.61□□□□□ -2.15
FNDC3A-203ENST00000484074 DNAH8Q96JB1 4490 aa1.6□□□□□ -2.15
FNDC3A-203ENST00000484074 TNXBP22105 4242 aa1.59□□□□□ -2.16
FNDC3A-203ENST00000484074 KRTAP12-4P60329 112 aa1.57□□□□□ -2.16
FNDC3A-203ENST00000484074 APOBP04114 4563 aaKnown RBP1.57□□□□□ -2.16
FNDC3A-203ENST00000484074 DNAH5Q8TE73 4624 aa1.56□□□□□ -2.16
FNDC3A-203ENST00000484074 MT2AP02795 61 aa1.56□□□□□ -2.16
FNDC3A-203ENST00000484074 LRP1BQ9NZR2 4599 aa1.56□□□□□ -2.16
FNDC3A-203ENST00000484074 KRTAP19-5Q3LI72 72 aa1.54□□□□□ -2.16
FNDC3A-203ENST00000484074 FAT1Q14517 4588 aa1.54□□□□□ -2.16
FNDC3A-203ENST00000484074 UBR4Q5T4S7 5183 aa1.52□□□□□ -2.17
FNDC3A-203ENST00000484074 OBSCNQ5VST9 7968 aa1.52□□□□□ -2.17
FNDC3A-203ENST00000484074 KRTAP4-8Q9BYQ9 185 aa1.52□□□□□ -2.17
FNDC3A-203ENST00000484074 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.51□□□□□ -2.17
FNDC3A-203ENST00000484074 MT1FP04733 61 aa1.51□□□□□ -2.17
FNDC3A-203ENST00000484074 LCE3CQ5T5A8 94 aa1.5□□□□□ -2.17
FNDC3A-203ENST00000484074 SPRR2GQ9BYE4 73 aa1.5□□□□□ -2.17
FNDC3A-203ENST00000484074 LCE3BQ5TA77 95 aa1.5□□□□□ -2.17
FNDC3A-203ENST00000484074 KRTAP4-1Q9BYQ7 146 aa1.5□□□□□ -2.17
FNDC3A-203ENST00000484074 MYCBP2O75592 4640 aa1.49□□□□□ -2.17
FNDC3A-203ENST00000484074 KRTAP5-2Q701N4 177 aa1.49□□□□□ -2.17
FNDC3A-203ENST00000484074 MUC17Q685J3 4493 aa1.48□□□□□ -2.17
FNDC3A-203ENST00000484074 SYNE1Q8NF91 8797 aaKnown RBP1.48□□□□□ -2.17
FNDC3A-203ENST00000484074 KRTAP5-3Q6L8H2 238 aa1.48□□□□□ -2.17
FNDC3A-203ENST00000484074 KRTAP9-2Q9BYQ4 174 aa1.46□□□□□ -2.18
FNDC3A-203ENST00000484074 HMCN2Q8NDA2 5059 aa1.45□□□□□ -2.18
FNDC3A-203ENST00000484074 KRTAP9-8Q9BYQ0 159 aa1.44□□□□□ -2.18
FNDC3A-203ENST00000484074 KRTAP4-2Q9BYR5 136 aa1.44□□□□□ -2.18
FNDC3A-203ENST00000484074 MT1GP13640 62 aa1.44□□□□□ -2.18
FNDC3A-203ENST00000484074 KRTAP19-1Q8IUB9 90 aa1.44□□□□□ -2.18
FNDC3A-203ENST00000484074 HERC1Q15751 4861 aa1.44□□□□□ -2.18
FNDC3A-203ENST00000484074 MT4P47944 62 aa1.44□□□□□ -2.18
FNDC3A-203ENST00000484074 KRTAP4-8A0A0G2JLE6 195 aa1.43□□□□□ -2.18
FNDC3A-203ENST00000484074 RNF213Q63HN8 5207 aa1.42□□□□□ -2.18
FNDC3A-203ENST00000484074 KRTAP20-1Q3LI63 56 aa1.41□□□□□ -2.18
FNDC3A-203ENST00000484074 KRTAP9-6A0A140TA67 174 aa1.4□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms