RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 ATP5EP56381 51 aaPredicted RBP6.88□□□□□ -1.31
SRSF6-202ENST00000483871 SEC61GP60059 68 aa6.87□□□□□ -1.31
SRSF6-202ENST00000483871 KRTAP10-6P60371 365 aaPredicted RBP6.83□□□□□ -1.32
SRSF6-202ENST00000483871 LCA10Q71F78 164 aa6.83□□□□□ -1.32
SRSF6-202ENST00000483871 S4R3F8 94 aa6.83□□□□□ -1.32
SRSF6-202ENST00000483871 A8MUN3 132 aa6.82□□□□□ -1.32
SRSF6-202ENST00000483871 V9GYY9 64 aa6.82□□□□□ -1.32
SRSF6-202ENST00000483871 LORP23490 312 aaPredicted RBP6.81□□□□□ -1.32
SRSF6-202ENST00000483871 DMAC1Q96GE9 116 aa6.81□□□□□ -1.32
SRSF6-202ENST00000483871 SPANXA2-OT1Q8N9U9 137 aa6.78□□□□□ -1.32
SRSF6-202ENST00000483871 KRTAP3-3Q9BYR6 98 aa6.78□□□□□ -1.32
SRSF6-202ENST00000483871 SERP1Q9Y6X1 66 aa6.75□□□□□ -1.33
SRSF6-202ENST00000483871 KRTAP9-8Q9BYQ0 159 aa6.74□□□□□ -1.33
SRSF6-202ENST00000483871 ACYP2P14621 99 aa6.73□□□□□ -1.33
SRSF6-202ENST00000483871 CSAG1Q6PB30 78 aa6.71□□□□□ -1.33
SRSF6-202ENST00000483871 SMIM26A0A096LP01 95 aa6.71□□□□□ -1.34
SRSF6-202ENST00000483871 MT2AP02795 61 aa6.67□□□□□ -1.34
SRSF6-202ENST00000483871 MT1FP04733 61 aa6.63□□□□□ -1.35
SRSF6-202ENST00000483871 CHKB-CPT1BH3BT56 60 aa6.61□□□□□ -1.35
SRSF6-202ENST00000483871 KRTAP10-10P60014 251 aa6.6□□□□□ -1.35
SRSF6-202ENST00000483871 COA5Q86WW8 74 aa6.59□□□□□ -1.35
SRSF6-202ENST00000483871 PMAIP1Q13794 54 aa6.55□□□□□ -1.36
SRSF6-202ENST00000483871 BRK1Q8WUW1 75 aa6.53□□□□□ -1.36
SRSF6-202ENST00000483871 SPTSSBQ8NFR3 76 aa6.51□□□□□ -1.37
SRSF6-202ENST00000483871 H0YAA0 97 aa6.5□□□□□ -1.37
SRSF6-202ENST00000483871 ADM2Q7Z4H4 148 aa6.5□□□□□ -1.37
SRSF6-202ENST00000483871 KRTAP9-3Q9BYQ3 159 aa6.5□□□□□ -1.37
SRSF6-202ENST00000483871 LCE2DQ5TA82 110 aaPredicted RBP6.49□□□□□ -1.37
SRSF6-202ENST00000483871 KRTAP9-2Q9BYQ4 174 aa6.46□□□□□ -1.37
SRSF6-202ENST00000483871 KRTAP3-2Q9BYR7 98 aa6.44□□□□□ -1.38
SRSF6-202ENST00000483871 P0C880 135 aa6.43□□□□□ -1.38
SRSF6-202ENST00000483871 Q1T7F1 81 aa6.42□□□□□ -1.38
SRSF6-202ENST00000483871 LCE2BO14633 110 aa6.4□□□□□ -1.38
SRSF6-202ENST00000483871 KRTAP19-1Q8IUB9 90 aa6.39□□□□□ -1.39
SRSF6-202ENST00000483871 FSIP2Q5CZC0 6907 aa6.38□□□□□ -1.39
SRSF6-202ENST00000483871 USH2AO75445 5202 aa6.36□□□□□ -1.39
SRSF6-202ENST00000483871 PSPHP1O15172 72 aa6.34□□□□□ -1.39
SRSF6-202ENST00000483871 PRR15LQ9BU68 103 aa6.34□□□□□ -1.39
SRSF6-202ENST00000483871 SPRR2GQ9BYE4 73 aa6.33□□□□□ -1.4
SRSF6-202ENST00000483871 CRIPTQ9P021 101 aa6.33□□□□□ -1.4
SRSF6-202ENST00000483871 LINC01558Q9Y6Z2 57 aa6.33□□□□□ -1.4
SRSF6-202ENST00000483871 A0A1B0GU69 56 aa6.3□□□□□ -1.4
SRSF6-202ENST00000483871 KTN1-AS1Q86SY8 53 aa6.28□□□□□ -1.4
SRSF6-202ENST00000483871 R4GN34 69 aa6.28□□□□□ -1.4
SRSF6-202ENST00000483871 M0QZ58 72 aa6.26□□□□□ -1.41
SRSF6-202ENST00000483871 SSPOA2VEC9 5147 aa6.22□□□□□ -1.41
SRSF6-202ENST00000483871 KRTAP19-8Q3LI54 63 aa6.22□□□□□ -1.41
SRSF6-202ENST00000483871 Q5VV11 94 aa6.22□□□□□ -1.41
SRSF6-202ENST00000483871 MT1BP07438 61 aa6.2□□□□□ -1.42
SRSF6-202ENST00000483871 KRTAP13-4Q3LI77 160 aa6.2□□□□□ -1.42
SRSF6-202ENST00000483871 A6NED7 52 aa6.19□□□□□ -1.42
SRSF6-202ENST00000483871 LINC01554Q52M75 96 aa6.18□□□□□ -1.42
SRSF6-202ENST00000483871 CRCT1Q9UGL9 99 aa6.17□□□□□ -1.42
SRSF6-202ENST00000483871 A0A1B0GU33 70 aa6.16□□□□□ -1.42
SRSF6-202ENST00000483871 SPATA8Q6RVD6 105 aa6.13□□□□□ -1.43
SRSF6-202ENST00000483871 UQCR11O14957 56 aa6.11□□□□□ -1.43
SRSF6-202ENST00000483871 A6NN06 94 aa6.1□□□□□ -1.43
SRSF6-202ENST00000483871 KRTAP9-6A0A140TA67 174 aa6.08□□□□□ -1.44
SRSF6-202ENST00000483871 KRTAP19-6Q3LI70 58 aa6.06□□□□□ -1.44
SRSF6-202ENST00000483871 A0A0D9SG42 100 aa6.04□□□□□ -1.44
SRSF6-202ENST00000483871 PLAC4Q8WY50 150 aa6.04□□□□□ -1.44
SRSF6-202ENST00000483871 CDC42SE1Q9NRR8 79 aa6.04□□□□□ -1.44
SRSF6-202ENST00000483871 MIR22HGQ0VDD5 57 aa6.03□□□□□ -1.44
SRSF6-202ENST00000483871 FCGBPQ9Y6R7 5405 aaPredicted RBP6.02□□□□□ -1.45
SRSF6-202ENST00000483871 H3BS24 57 aa6.01□□□□□ -1.45
SRSF6-202ENST00000483871 A8MU10 97 aa5.98□□□□□ -1.45
SRSF6-202ENST00000483871 KRTAP10-5P60370 271 aa5.94□□□□□ -1.46
SRSF6-202ENST00000483871 KRTAP12-1P59990 96 aa5.91□□□□□ -1.46
SRSF6-202ENST00000483871 MT1XP80297 61 aa5.91□□□□□ -1.46
SRSF6-202ENST00000483871 SPINT4Q6UDR6 99 aa5.91□□□□□ -1.46
SRSF6-202ENST00000483871 KRTAP12-2P59991 146 aa5.89□□□□□ -1.47
SRSF6-202ENST00000483871 K7ERS5 55 aa5.85□□□□□ -1.47
SRSF6-202ENST00000483871 PRO2289Q9P1D8 64 aa5.84□□□□□ -1.47
SRSF6-202ENST00000483871 CAMK2N1Q7Z7J9 78 aa5.83□□□□□ -1.48
SRSF6-202ENST00000483871 MACF1Q9UPN3 7388 aaKnown RBP5.77□□□□□ -1.49
SRSF6-202ENST00000483871 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.72□□□□□ -1.49
SRSF6-202ENST00000483871 KMT2DO14686 5537 aa5.72□□□□□ -1.49
SRSF6-202ENST00000483871 KRTAP10-7P60409 375 aaPredicted RBP5.68□□□□□ -1.5
SRSF6-202ENST00000483871 SYNE2Q8WXH0 6885 aaKnown RBP5.67□□□□□ -1.5
SRSF6-202ENST00000483871 PRAC1Q96KF2 57 aa5.67□□□□□ -1.5
SRSF6-202ENST00000483871 C10orf95Q9H7T3 257 aa5.63□□□□□ -1.51
SRSF6-202ENST00000483871 KRTAP10-12P60413 245 aa5.6□□□□□ -1.51
SRSF6-202ENST00000483871 KRTAP4-8A0A0G2JLE6 195 aa5.58□□□□□ -1.52
SRSF6-202ENST00000483871 KRTAP4-8Q9BYQ9 185 aa5.58□□□□□ -1.52
SRSF6-202ENST00000483871 KRTAP9-7A8MTY7 169 aa5.53□□□□□ -1.52
SRSF6-202ENST00000483871 ROMO1P60602 79 aa5.52□□□□□ -1.53
SRSF6-202ENST00000483871 TNP1P09430 55 aa5.48□□□□□ -1.53
SRSF6-202ENST00000483871 KRTAP6-3Q3LI67 103 aa5.47□□□□□ -1.53
SRSF6-202ENST00000483871 KRTAP8-1Q8IUC2 63 aa5.47□□□□□ -1.53
SRSF6-202ENST00000483871 MUC12Q9UKN1 5478 aa5.43□□□□□ -1.54
SRSF6-202ENST00000483871 KRTAP5-9P26371 169 aa5.4□□□□□ -1.55
SRSF6-202ENST00000483871 KRTAP25-1Q3LHN0 102 aa5.4□□□□□ -1.55
SRSF6-202ENST00000483871 SPRR2FQ96RM1 72 aa5.37□□□□□ -1.55
SRSF6-202ENST00000483871 LCE3AQ5TA76 89 aa5.36□□□□□ -1.55
SRSF6-202ENST00000483871 A0A0A0MQY5 61 aa5.34□□□□□ -1.56
SRSF6-202ENST00000483871 MDN1Q9NU22 5596 aa5.32□□□□□ -1.56
SRSF6-202ENST00000483871 KRTAP19-7Q3SYF9 63 aa5.28□□□□□ -1.56
SRSF6-202ENST00000483871 KRTAP19-5Q3LI72 72 aa5.27□□□□□ -1.57
SRSF6-202ENST00000483871 MT1EP04732 61 aa5.2□□□□□ -1.58
SRSF6-202ENST00000483871 NEBP20929 6669 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms