RNA–Protein interactions for RNA: ENST00000483687.5

PCCB-216, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-216ENST00000483687 LCA10Q71F78 164 aa9.29□□□□□ -0.92
PCCB-216ENST00000483687 CHKB-CPT1BH3BT56 60 aa9.24□□□□□ -0.93
PCCB-216ENST00000483687 COA5Q86WW8 74 aa9.24□□□□□ -0.93
PCCB-216ENST00000483687 M0R2T5 61 aa9.23□□□□□ -0.93
PCCB-216ENST00000483687 KRTAP3-3Q9BYR6 98 aa9.21□□□□□ -0.94
PCCB-216ENST00000483687 CSAG1Q6PB30 78 aa9.16□□□□□ -0.94
PCCB-216ENST00000483687 LCE2AQ5TA79 106 aaPredicted RBP9.15□□□□□ -0.94
PCCB-216ENST00000483687 SPTSSBQ8NFR3 76 aa9.11□□□□□ -0.95
PCCB-216ENST00000483687 SERP1Q9Y6X1 66 aa9.08□□□□□ -0.96
PCCB-216ENST00000483687 KRTAP10-6P60371 365 aaPredicted RBP9.01□□□□□ -0.97
PCCB-216ENST00000483687 LORP23490 312 aaPredicted RBP8.96□□□□□ -0.98
PCCB-216ENST00000483687 H0YAA0 97 aa8.9□□□□□ -0.98
PCCB-216ENST00000483687 RPS28P62857 69 aaKnown RBP8.9□□□□□ -0.98
PCCB-216ENST00000483687 KRTAP9-8Q9BYQ0 159 aa8.9□□□□□ -0.98
PCCB-216ENST00000483687 ADM2Q7Z4H4 148 aa8.88□□□□□ -0.99
PCCB-216ENST00000483687 MT2AP02795 61 aa8.85□□□□□ -0.99
PCCB-216ENST00000483687 SEC61GP60059 68 aa8.8□□□□□ -1
PCCB-216ENST00000483687 MT1FP04733 61 aa8.8□□□□□ -1
PCCB-216ENST00000483687 KRTAP3-2Q9BYR7 98 aa8.8□□□□□ -1
PCCB-216ENST00000483687 SMIM26A0A096LP01 95 aa8.79□□□□□ -1
PCCB-216ENST00000483687 KRTAP10-10P60014 251 aa8.79□□□□□ -1
PCCB-216ENST00000483687 P0C880 135 aa8.77□□□□□ -1
PCCB-216ENST00000483687 LINC01558Q9Y6Z2 57 aa8.77□□□□□ -1.01
PCCB-216ENST00000483687 A0A1B0GU69 56 aa8.76□□□□□ -1.01
PCCB-216ENST00000483687 V9GYY9 64 aa8.71□□□□□ -1.01
PCCB-216ENST00000483687 Q1T7F1 81 aa8.7□□□□□ -1.02
PCCB-216ENST00000483687 PRR15LQ9BU68 103 aa8.69□□□□□ -1.02
PCCB-216ENST00000483687 CRIPTQ9P021 101 aa8.64□□□□□ -1.03
PCCB-216ENST00000483687 R4GN34 69 aa8.6□□□□□ -1.03
PCCB-216ENST00000483687 PSPHP1O15172 72 aa8.59□□□□□ -1.03
PCCB-216ENST00000483687 KRTAP9-3Q9BYQ3 159 aa8.59□□□□□ -1.03
PCCB-216ENST00000483687 A0A1B0GU33 70 aa8.57□□□□□ -1.04
PCCB-216ENST00000483687 M0QZ58 72 aa8.57□□□□□ -1.04
PCCB-216ENST00000483687 KRTAP19-1Q8IUB9 90 aa8.52□□□□□ -1.05
PCCB-216ENST00000483687 SPRR2GQ9BYE4 73 aa8.52□□□□□ -1.05
PCCB-216ENST00000483687 Q5VV11 94 aa8.49□□□□□ -1.05
PCCB-216ENST00000483687 KRTAP13-4Q3LI77 160 aa8.49□□□□□ -1.05
PCCB-216ENST00000483687 SPATA8Q6RVD6 105 aa8.46□□□□□ -1.06
PCCB-216ENST00000483687 UQCR11O14957 56 aa8.43□□□□□ -1.06
PCCB-216ENST00000483687 LINC01554Q52M75 96 aa8.43□□□□□ -1.06
PCCB-216ENST00000483687 LCE2DQ5TA82 110 aaPredicted RBP8.42□□□□□ -1.06
PCCB-216ENST00000483687 LCE2BO14633 110 aa8.41□□□□□ -1.06
PCCB-216ENST00000483687 A6NED7 52 aa8.34□□□□□ -1.07
PCCB-216ENST00000483687 A0A0D9SG42 100 aa8.33□□□□□ -1.08
PCCB-216ENST00000483687 KRTAP19-8Q3LI54 63 aa8.33□□□□□ -1.08
PCCB-216ENST00000483687 MIR22HGQ0VDD5 57 aa8.31□□□□□ -1.08
PCCB-216ENST00000483687 A8MU10 97 aa8.29□□□□□ -1.08
PCCB-216ENST00000483687 USH2AO75445 5202 aa8.28□□□□□ -1.08
PCCB-216ENST00000483687 KRTAP9-2Q9BYQ4 174 aa8.28□□□□□ -1.08
PCCB-216ENST00000483687 MT1BP07438 61 aa8.25□□□□□ -1.09
PCCB-216ENST00000483687 A6NN06 94 aa8.23□□□□□ -1.09
PCCB-216ENST00000483687 PLAC4Q8WY50 150 aa8.2□□□□□ -1.1
PCCB-216ENST00000483687 SVIPQ8NHG7 77 aa8.19□□□□□ -1.1
PCCB-216ENST00000483687 SPINT4Q6UDR6 99 aa8.16□□□□□ -1.1
PCCB-216ENST00000483687 KRTAP12-1P59990 96 aa8.15□□□□□ -1.11
PCCB-216ENST00000483687 FSIP2Q5CZC0 6907 aa8.14□□□□□ -1.11
PCCB-216ENST00000483687 KRTAP12-2P59991 146 aa8.12□□□□□ -1.11
PCCB-216ENST00000483687 CDC42SE1Q9NRR8 79 aa8.12□□□□□ -1.11
PCCB-216ENST00000483687 SSPOA2VEC9 5147 aa8.09□□□□□ -1.12
PCCB-216ENST00000483687 CAMK2N1Q7Z7J9 78 aa8.02□□□□□ -1.13
PCCB-216ENST00000483687 BRK1Q8WUW1 75 aa8.01□□□□□ -1.13
PCCB-216ENST00000483687 K7ERS5 55 aa8□□□□□ -1.13
PCCB-216ENST00000483687 KRTAP19-6Q3LI70 58 aa7.97□□□□□ -1.13
PCCB-216ENST00000483687 CRCT1Q9UGL9 99 aa7.94□□□□□ -1.14
PCCB-216ENST00000483687 MT1XP80297 61 aa7.92□□□□□ -1.14
PCCB-216ENST00000483687 PRO2289Q9P1D8 64 aa7.91□□□□□ -1.14
PCCB-216ENST00000483687 KRTAP10-5P60370 271 aa7.9□□□□□ -1.14
PCCB-216ENST00000483687 PRO0628Q9UI54 55 aa7.89□□□□□ -1.15
PCCB-216ENST00000483687 FCGBPQ9Y6R7 5405 aaPredicted RBP7.78□□□□□ -1.16
PCCB-216ENST00000483687 KRTAP9-6A0A140TA67 174 aa7.75□□□□□ -1.17
PCCB-216ENST00000483687 C10orf95Q9H7T3 257 aa7.72□□□□□ -1.17
PCCB-216ENST00000483687 KRTAP10-7P60409 375 aaPredicted RBP7.6□□□□□ -1.19
PCCB-216ENST00000483687 ROMO1P60602 79 aa7.6□□□□□ -1.19
PCCB-216ENST00000483687 TNP1P09430 55 aa7.57□□□□□ -1.2
PCCB-216ENST00000483687 PMAIP1Q13794 54 aa7.56□□□□□ -1.2
PCCB-216ENST00000483687 KRTAP10-12P60413 245 aa7.52□□□□□ -1.21
PCCB-216ENST00000483687 KRTAP25-1Q3LHN0 102 aa7.48□□□□□ -1.21
PCCB-216ENST00000483687 KMT2DO14686 5537 aa7.47□□□□□ -1.21
PCCB-216ENST00000483687 MACF1Q9UPN3 7388 aaKnown RBP7.42□□□□□ -1.22
PCCB-216ENST00000483687 KRTAP4-8A0A0G2JLE6 195 aa7.38□□□□□ -1.23
PCCB-216ENST00000483687 KRTAP4-8Q9BYQ9 185 aa7.38□□□□□ -1.23
PCCB-216ENST00000483687 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.35□□□□□ -1.23
PCCB-216ENST00000483687 LCE3AQ5TA76 89 aa7.3□□□□□ -1.24
PCCB-216ENST00000483687 KTN1-AS1Q86SY8 53 aa7.28□□□□□ -1.24
PCCB-216ENST00000483687 KRTAP8-1Q8IUC2 63 aa7.27□□□□□ -1.25
PCCB-216ENST00000483687 SYNE2Q8WXH0 6885 aaKnown RBP7.24□□□□□ -1.25
PCCB-216ENST00000483687 KRTAP23-1A1A580 65 aa7.21□□□□□ -1.26
PCCB-216ENST00000483687 PP632Q6XCG6 107 aa7.15□□□□□ -1.26
PCCB-216ENST00000483687 PRAC1Q96KF2 57 aa7.11□□□□□ -1.27
PCCB-216ENST00000483687 KRTAP19-5Q3LI72 72 aa7.1□□□□□ -1.27
PCCB-216ENST00000483687 KRTAP6-3Q3LI67 103 aa7.09□□□□□ -1.27
PCCB-216ENST00000483687 SPRR2FQ96RM1 72 aa7.07□□□□□ -1.28
PCCB-216ENST00000483687 KRTAP5-9P26371 169 aa7.07□□□□□ -1.28
PCCB-216ENST00000483687 KRTAP19-7Q3SYF9 63 aa7.07□□□□□ -1.28
PCCB-216ENST00000483687 KRTAP9-7A8MTY7 169 aa7.06□□□□□ -1.28
PCCB-216ENST00000483687 KRTAP12-3P60328 96 aa7.01□□□□□ -1.29
PCCB-216ENST00000483687 MUC12Q9UKN1 5478 aa6.98□□□□□ -1.29
PCCB-216ENST00000483687 MT1EP04732 61 aa6.97□□□□□ -1.29
PCCB-216ENST00000483687 MDN1Q9NU22 5596 aa6.87□□□□□ -1.31
PCCB-216ENST00000483687 KRTAP15-1Q3LI76 137 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms