RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 LINC00304Q8N9R0 145 aa4.53□□□□□ -1.68
SORT1-205ENST00000483508 RETNLBQ9BQ08 111 aa4.53□□□□□ -1.68
SORT1-205ENST00000483508 KRTAP4-8Q9BYQ9 185 aa4.53□□□□□ -1.68
SORT1-205ENST00000483508 IGKV2D-30A0A075B6S6 120 aa4.52□□□□□ -1.69
SORT1-205ENST00000483508 A8MU10 97 aa4.52□□□□□ -1.69
SORT1-205ENST00000483508 SPINK7P58062 85 aa4.51□□□□□ -1.69
SORT1-205ENST00000483508 SPTSSBQ8NFR3 76 aa4.51□□□□□ -1.69
SORT1-205ENST00000483508 UBR4Q5T4S7 5183 aa4.51□□□□□ -1.69
SORT1-205ENST00000483508 A0A1B0GU69 56 aa4.5□□□□□ -1.69
SORT1-205ENST00000483508 A6NN06 94 aa4.5□□□□□ -1.69
SORT1-205ENST00000483508 C7orf65Q6ZTY9 151 aa4.5□□□□□ -1.69
SORT1-205ENST00000483508 KTN1-AS1Q86SY8 53 aa4.5□□□□□ -1.69
SORT1-205ENST00000483508 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.47□□□□□ -1.69
SORT1-205ENST00000483508 LRP2P98164 4655 aa4.45□□□□□ -1.7
SORT1-205ENST00000483508 KRTAP9-2Q9BYQ4 174 aa4.45□□□□□ -1.7
SORT1-205ENST00000483508 KRTAP9-6A0A140TA67 174 aa4.44□□□□□ -1.7
SORT1-205ENST00000483508 A8MUU9 505 aa4.44□□□□□ -1.7
SORT1-205ENST00000483508 SPATA8Q6RVD6 105 aa4.44□□□□□ -1.7
SORT1-205ENST00000483508 C20orf166-AS1Q96NR2 134 aa4.44□□□□□ -1.7
SORT1-205ENST00000483508 UQCR11O14957 56 aa4.43□□□□□ -1.7
SORT1-205ENST00000483508 SEC61GP60059 68 aa4.42□□□□□ -1.7
SORT1-205ENST00000483508 MIR22HGQ0VDD5 57 aa4.4□□□□□ -1.71
SORT1-205ENST00000483508 KRTAP4-12Q9BQ66 201 aa4.37□□□□□ -1.71
SORT1-205ENST00000483508 C9orf92A6NGG3 77 aa4.36□□□□□ -1.71
SORT1-205ENST00000483508 LPAP08519 4548 aa4.36□□□□□ -1.71
SORT1-205ENST00000483508 RNF213Q63HN8 5207 aa4.35□□□□□ -1.71
SORT1-205ENST00000483508 TPRXLQ17RH7 258 aa4.33□□□□□ -1.72
SORT1-205ENST00000483508 LCE3BQ5TA77 95 aa4.33□□□□□ -1.72
SORT1-205ENST00000483508 RBM12B-AS1Q9P1G2 102 aa4.33□□□□□ -1.72
SORT1-205ENST00000483508 KRTAP19-1Q8IUB9 90 aa4.32□□□□□ -1.72
SORT1-205ENST00000483508 COX6B2Q6YFQ2 88 aa4.3□□□□□ -1.72
SORT1-205ENST00000483508 KRTAP3-1Q9BYR8 98 aa4.29□□□□□ -1.72
SORT1-205ENST00000483508 A0A1B0GU33 70 aa4.25□□□□□ -1.73
SORT1-205ENST00000483508 H1FX-AS1Q4G0G2 97 aa4.25□□□□□ -1.73
SORT1-205ENST00000483508 SEC61BP60468 96 aaKnown RBP4.24□□□□□ -1.73
SORT1-205ENST00000483508 RPL37P61927 97 aaKnown RBP4.24□□□□□ -1.73
SORT1-205ENST00000483508 KRTAP9-9Q9BYP9 154 aa4.23□□□□□ -1.73
SORT1-205ENST00000483508 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
SORT1-205ENST00000483508 MUC17Q685J3 4493 aa4.23□□□□□ -1.73
SORT1-205ENST00000483508 H0YAA0 97 aa4.22□□□□□ -1.73
SORT1-205ENST00000483508 KRTAP4-8A0A0G2JLE6 195 aa4.21□□□□□ -1.74
SORT1-205ENST00000483508 PRAC1Q96KF2 57 aa4.2□□□□□ -1.74
SORT1-205ENST00000483508 K7ERS5 55 aa4.18□□□□□ -1.74
SORT1-205ENST00000483508 ADM2Q7Z4H4 148 aa4.18□□□□□ -1.74
SORT1-205ENST00000483508 MUC2Q02817 5179 aa4.18□□□□□ -1.74
SORT1-205ENST00000483508 LINC01554Q52M75 96 aa4.15□□□□□ -1.75
SORT1-205ENST00000483508 KRTAP4-1Q9BYQ7 146 aa4.14□□□□□ -1.75
SORT1-205ENST00000483508 S4R3F8 94 aa4.14□□□□□ -1.75
SORT1-205ENST00000483508 CSAG1Q6PB30 78 aa4.13□□□□□ -1.75
SORT1-205ENST00000483508 CRCT1Q9UGL9 99 aa4.11□□□□□ -1.75
SORT1-205ENST00000483508 FAT4Q6V0I7 4981 aa4.09□□□□□ -1.75
SORT1-205ENST00000483508 KRTAP10-6P60371 365 aaPredicted RBP4.09□□□□□ -1.75
SORT1-205ENST00000483508 KRTAP4-7Q9BYR0 210 aa4.09□□□□□ -1.75
SORT1-205ENST00000483508 M0R2T5 61 aa4.08□□□□□ -1.76
SORT1-205ENST00000483508 H3BS24 57 aa4.07□□□□□ -1.76
SORT1-205ENST00000483508 KRTAP25-1Q3LHN0 102 aa4.07□□□□□ -1.76
SORT1-205ENST00000483508 MT1HP80294 61 aa4.04□□□□□ -1.76
SORT1-205ENST00000483508 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
SORT1-205ENST00000483508 ROMO1P60602 79 aa4.03□□□□□ -1.76
SORT1-205ENST00000483508 KRTAP13-4Q3LI77 160 aa4.01□□□□□ -1.77
SORT1-205ENST00000483508 KRTAP19-2Q3LHN2 52 aa4□□□□□ -1.77
SORT1-205ENST00000483508 LCE4AQ5TA78 99 aa4□□□□□ -1.77
SORT1-205ENST00000483508 P0C880 135 aa3.98□□□□□ -1.77
SORT1-205ENST00000483508 A0A0D9SG42 100 aa3.97□□□□□ -1.77
SORT1-205ENST00000483508 M0QZ58 72 aa3.97□□□□□ -1.77
SORT1-205ENST00000483508 KRTAP19-4Q3LI73 84 aa3.94□□□□□ -1.78
SORT1-205ENST00000483508 KRTAP4-2Q9BYR5 136 aa3.94□□□□□ -1.78
SORT1-205ENST00000483508 FLGP20930 4061 aaPredicted RBP3.92□□□□□ -1.78
SORT1-205ENST00000483508 KRTAP9-7A8MTY7 169 aa3.92□□□□□ -1.78
SORT1-205ENST00000483508 KRTAP4-9Q9BYQ8 210 aa3.92□□□□□ -1.78
SORT1-205ENST00000483508 KRTAP12-1P59990 96 aa3.9□□□□□ -1.79
SORT1-205ENST00000483508 KRTAP12-2P59991 146 aa3.89□□□□□ -1.79
SORT1-205ENST00000483508 SPINT4Q6UDR6 99 aa3.87□□□□□ -1.79
SORT1-205ENST00000483508 CRIPTQ9P021 101 aa3.87□□□□□ -1.79
SORT1-205ENST00000483508 FSIP2Q5CZC0 6907 aa3.86□□□□□ -1.79
SORT1-205ENST00000483508 R4GN34 69 aa3.82□□□□□ -1.8
SORT1-205ENST00000483508 KRTAP4-11Q9BYQ6 195 aa3.79□□□□□ -1.8
SORT1-205ENST00000483508 KRTAP5-3Q6L8H2 238 aa3.78□□□□□ -1.8
SORT1-205ENST00000483508 KRTAP9-8Q9BYQ0 159 aa3.78□□□□□ -1.8
SORT1-205ENST00000483508 C10orf95Q9H7T3 257 aa3.78□□□□□ -1.8
SORT1-205ENST00000483508 LCE5AQ5TCM9 118 aa3.76□□□□□ -1.81
SORT1-205ENST00000483508 KRTAP10-10P60014 251 aa3.75□□□□□ -1.81
SORT1-205ENST00000483508 KRTAP9-3Q9BYQ3 159 aa3.75□□□□□ -1.81
SORT1-205ENST00000483508 MT2AP02795 61 aa3.72□□□□□ -1.81
SORT1-205ENST00000483508 MT1FP04733 61 aa3.69□□□□□ -1.82
SORT1-205ENST00000483508 KRTAP15-1Q3LI76 137 aa3.69□□□□□ -1.82
SORT1-205ENST00000483508 PP632Q6XCG6 107 aa3.65□□□□□ -1.83
SORT1-205ENST00000483508 CAMK2N1Q7Z7J9 78 aa3.62□□□□□ -1.83
SORT1-205ENST00000483508 KRTAP19-6Q3LI70 58 aa3.59□□□□□ -1.83
SORT1-205ENST00000483508 USH2AO75445 5202 aa3.57□□□□□ -1.84
SORT1-205ENST00000483508 KRTAP23-1A1A580 65 aa3.56□□□□□ -1.84
SORT1-205ENST00000483508 PLAC4Q8WY50 150 aa3.55□□□□□ -1.84
SORT1-205ENST00000483508 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
SORT1-205ENST00000483508 SSPOA2VEC9 5147 aa3.53□□□□□ -1.84
SORT1-205ENST00000483508 FCGBPQ9Y6R7 5405 aaPredicted RBP3.53□□□□□ -1.84
SORT1-205ENST00000483508 KRTAP6-3Q3LI67 103 aa3.53□□□□□ -1.84
SORT1-205ENST00000483508 TNP1P09430 55 aa3.52□□□□□ -1.85
SORT1-205ENST00000483508 SPRR2GQ9BYE4 73 aa3.49□□□□□ -1.85
SORT1-205ENST00000483508 MACF1Q9UPN3 7388 aaKnown RBP3.46□□□□□ -1.86
SORT1-205ENST00000483508 LUZP6Q538Z0 58 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms