RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 HCG22E2RYF7 251 aa3.47□□□□□ -1.85
CLK1-212ENST00000482590 SPRR1AP35321 89 aa3.47□□□□□ -1.85
CLK1-212ENST00000482590 MOBPQ13875 183 aa3.47□□□□□ -1.85
CLK1-212ENST00000482590 SERP2Q8N6R1 65 aa3.47□□□□□ -1.85
CLK1-212ENST00000482590 KCNQ1DNQ9H478 68 aa3.47□□□□□ -1.85
CLK1-212ENST00000482590 RPS29P62273 56 aaKnown RBP3.46□□□□□ -1.86
CLK1-212ENST00000482590 IFI27L1Q96BM0 104 aa3.46□□□□□ -1.86
CLK1-212ENST00000482590 MYMXA0A1B0GTQ4 84 aa3.45□□□□□ -1.86
CLK1-212ENST00000482590 NDUFC1O43677 76 aa3.45□□□□□ -1.86
CLK1-212ENST00000482590 APOC3P02656 99 aa3.45□□□□□ -1.86
CLK1-212ENST00000482590 SSBP3-AS1Q7Z2R9 100 aa3.44□□□□□ -1.86
CLK1-212ENST00000482590 FSIP2Q5CZC0 6907 aa3.43□□□□□ -1.86
CLK1-212ENST00000482590 Q6ZRX8 168 aa3.43□□□□□ -1.86
CLK1-212ENST00000482590 TRAV23DV6A0A075B6W5 121 aa3.42□□□□□ -1.86
CLK1-212ENST00000482590 A0A0G2JQZ4 141 aa3.42□□□□□ -1.86
CLK1-212ENST00000482590 SYS1-DBNDD2H3BUS1 97 aa3.42□□□□□ -1.86
CLK1-212ENST00000482590 CSAG1Q6PB30 78 aa3.42□□□□□ -1.86
CLK1-212ENST00000482590 LIMD2Q9BT23 127 aa3.42□□□□□ -1.86
CLK1-212ENST00000482590 SPCS1Q9Y6A9 102 aa3.42□□□□□ -1.86
CLK1-212ENST00000482590 PLNP26678 52 aa3.41□□□□□ -1.86
CLK1-212ENST00000482590 KRTAP4-1Q9BYQ7 146 aa3.41□□□□□ -1.86
CLK1-212ENST00000482590 CYSTM1Q9H1C7 97 aa3.41□□□□□ -1.86
CLK1-212ENST00000482590 ORMDL1Q9P0S3 153 aa3.41□□□□□ -1.86
CLK1-212ENST00000482590 LEPROTL1O95214 131 aa3.4□□□□□ -1.87
CLK1-212ENST00000482590 DMAC1Q96GE9 116 aa3.4□□□□□ -1.87
CLK1-212ENST00000482590 IGLV6-57P01721 117 aa3.39□□□□□ -1.87
CLK1-212ENST00000482590 A0A1W2PPM0 123 aa3.38□□□□□ -1.87
CLK1-212ENST00000482590 ETDBQ3ZM63 59 aa3.38□□□□□ -1.87
CLK1-212ENST00000482590 C9orf92A6NGG3 77 aa3.37□□□□□ -1.87
CLK1-212ENST00000482590 PCOTHQ58A44 107 aa3.37□□□□□ -1.87
CLK1-212ENST00000482590 H7BZZ5 65 aa3.36□□□□□ -1.87
CLK1-212ENST00000482590 BVES-AS1Q5T3Y7 98 aa3.36□□□□□ -1.87
CLK1-212ENST00000482590 CRCT1Q9UGL9 99 aa3.36□□□□□ -1.87
CLK1-212ENST00000482590 SPRR1BP22528 89 aa3.35□□□□□ -1.87
CLK1-212ENST00000482590 COX7BP24311 80 aa3.34□□□□□ -1.87
CLK1-212ENST00000482590 ELOF1P60002 83 aaKnown RBP3.34□□□□□ -1.87
CLK1-212ENST00000482590 MT1HP80294 61 aa3.34□□□□□ -1.87
CLK1-212ENST00000482590 HIGD1BQ9P298 99 aa3.34□□□□□ -1.87
CLK1-212ENST00000482590 PRO1854Q9UHT4 67 aa3.34□□□□□ -1.87
CLK1-212ENST00000482590 TRAV22A0A0B4J277 110 aa3.33□□□□□ -1.88
CLK1-212ENST00000482590 TEX49A0A1B0GTD5 131 aa3.33□□□□□ -1.88
CLK1-212ENST00000482590 Q5VV11 94 aa3.33□□□□□ -1.88
CLK1-212ENST00000482590 COX6B2Q6YFQ2 88 aa3.33□□□□□ -1.88
CLK1-212ENST00000482590 LINC00308Q8TCZ7 52 aa3.33□□□□□ -1.88
CLK1-212ENST00000482590 ZNF815PA8K554 130 aa3.32□□□□□ -1.88
CLK1-212ENST00000482590 M0R2T5 61 aa3.32□□□□□ -1.88
CLK1-212ENST00000482590 KLKP1Q107X0 134 aa3.32□□□□□ -1.88
CLK1-212ENST00000482590 DEFB105AQ8NG35 78 aa3.32□□□□□ -1.88
CLK1-212ENST00000482590 KRTAP5-8O75690 187 aa3.31□□□□□ -1.88
CLK1-212ENST00000482590 KRTAP19-2Q3LHN2 52 aa3.31□□□□□ -1.88
CLK1-212ENST00000482590 COX6CP09669 75 aa3.3□□□□□ -1.88
CLK1-212ENST00000482590 RPL37P61927 97 aaKnown RBP3.3□□□□□ -1.88
CLK1-212ENST00000482590 F8WEM9 126 aa3.29□□□□□ -1.88
CLK1-212ENST00000482590 PDE6GP18545 87 aa3.29□□□□□ -1.88
CLK1-212ENST00000482590 FLGP20930 4061 aaPredicted RBP3.29□□□□□ -1.88
CLK1-212ENST00000482590 IGLV5-48A0A075B6I7 105 aa3.28□□□□□ -1.88
CLK1-212ENST00000482590 CHKB-CPT1BH3BT56 60 aa3.28□□□□□ -1.88
CLK1-212ENST00000482590 JMJD7-PLA2G4BH0Y9G9 81 aa3.27□□□□□ -1.89
CLK1-212ENST00000482590 H3BUT2 72 aa3.27□□□□□ -1.89
CLK1-212ENST00000482590 ACYP1P07311 99 aa3.25□□□□□ -1.89
CLK1-212ENST00000482590 SPATA45Q537H7 98 aa3.25□□□□□ -1.89
CLK1-212ENST00000482590 C3orf79P0CE67 100 aa3.24□□□□□ -1.89
CLK1-212ENST00000482590 LINC00643Q86TS7 51 aa3.24□□□□□ -1.89
CLK1-212ENST00000482590 C20orf197Q8N268 126 aa3.24□□□□□ -1.89
CLK1-212ENST00000482590 Q6JHZ5 121 aa3.23□□□□□ -1.89
CLK1-212ENST00000482590 MUSTN1Q8IVN3 82 aa3.23□□□□□ -1.89
CLK1-212ENST00000482590 SMIM11BQ8TCY0 68 aa3.23□□□□□ -1.89
CLK1-212ENST00000482590 LOC101927531A0A1B0GV80 90 aa3.22□□□□□ -1.89
CLK1-212ENST00000482590 Q6ZQY7 126 aa3.22□□□□□ -1.89
CLK1-212ENST00000482590 IGFL1Q6UW32 110 aa3.21□□□□□ -1.9
CLK1-212ENST00000482590 OBSCN-AS1Q96MR7 158 aa3.21□□□□□ -1.9
CLK1-212ENST00000482590 LINC00575Q6W349 94 aa3.2□□□□□ -1.9
CLK1-212ENST00000482590 Q96NJ1 140 aa3.19□□□□□ -1.9
CLK1-212ENST00000482590 LCE3DQ9BYE3 92 aa3.19□□□□□ -1.9
CLK1-212ENST00000482590 SSPOA2VEC9 5147 aa3.18□□□□□ -1.9
CLK1-212ENST00000482590 IGKV3D-7A0A0C4DH55 119 aa3.18□□□□□ -1.9
CLK1-212ENST00000482590 INE1O15225 51 aa3.18□□□□□ -1.9
CLK1-212ENST00000482590 PP632Q6XCG6 107 aa3.16□□□□□ -1.9
CLK1-212ENST00000482590 COA5Q86WW8 74 aa3.15□□□□□ -1.91
CLK1-212ENST00000482590 USH2AO75445 5202 aa3.15□□□□□ -1.91
CLK1-212ENST00000482590 DNAL4O96015 105 aa3.14□□□□□ -1.91
CLK1-212ENST00000482590 LOC110117498A0A087WWA1 95 aa3.12□□□□□ -1.91
CLK1-212ENST00000482590 H0YGX0 51 aa3.11□□□□□ -1.91
CLK1-212ENST00000482590 MACF1Q9UPN3 7388 aaKnown RBP3.09□□□□□ -1.91
CLK1-212ENST00000482590 IGKV4-1P06312 121 aa3.09□□□□□ -1.91
CLK1-212ENST00000482590 SYNE2Q8WXH0 6885 aaKnown RBP3.08□□□□□ -1.92
CLK1-212ENST00000482590 MT2AP02795 61 aa3.08□□□□□ -1.92
CLK1-212ENST00000482590 COX8AP10176 69 aa3.08□□□□□ -1.92
CLK1-212ENST00000482590 LINC01558Q9Y6Z2 57 aa3.08□□□□□ -1.92
CLK1-212ENST00000482590 MT1FP04733 61 aa3.06□□□□□ -1.92
CLK1-212ENST00000482590 KRTAP10-10P60014 251 aa3.06□□□□□ -1.92
CLK1-212ENST00000482590 FCGBPQ9Y6R7 5405 aaPredicted RBP3.06□□□□□ -1.92
CLK1-212ENST00000482590 TRBV7-4A0A0J9YYF1 115 aa3.05□□□□□ -1.92
CLK1-212ENST00000482590 PRR15LQ9BU68 103 aa3.05□□□□□ -1.92
CLK1-212ENST00000482590 LINC00846Q9NV44 126 aa3.05□□□□□ -1.92
CLK1-212ENST00000482590 UQCR11O14957 56 aa3.04□□□□□ -1.92
CLK1-212ENST00000482590 LINC00208Q96KT6 92 aa3.04□□□□□ -1.92
CLK1-212ENST00000482590 LINC00472Q9H8W2 130 aa3.02□□□□□ -1.93
CLK1-212ENST00000482590 SNURFQ9Y675 71 aa3.02□□□□□ -1.93
CLK1-212ENST00000482590 ZCCHC13Q8WW36 166 aaKnown RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms