RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 KRTAP10-6P60371 365 aaPredicted RBP6.45□□□□□ -1.38
HDAC1-208ENST00000482310 S4R3F8 94 aa6.44□□□□□ -1.38
HDAC1-208ENST00000482310 ANAPC13Q9BS18 74 aa6.43□□□□□ -1.38
HDAC1-208ENST00000482310 COX7CP15954 63 aa6.41□□□□□ -1.38
HDAC1-208ENST00000482310 LCA10Q71F78 164 aa6.39□□□□□ -1.39
HDAC1-208ENST00000482310 A8MUN3 132 aa6.35□□□□□ -1.39
HDAC1-208ENST00000482310 DMAC1Q96GE9 116 aa6.33□□□□□ -1.4
HDAC1-208ENST00000482310 CYSTM1Q9H1C7 97 aa6.32□□□□□ -1.4
HDAC1-208ENST00000482310 CCDC179H3BU77 68 aa6.3□□□□□ -1.4
HDAC1-208ENST00000482310 KRTAP9-8Q9BYQ0 159 aa6.3□□□□□ -1.4
HDAC1-208ENST00000482310 CSAG1Q6PB30 78 aa6.29□□□□□ -1.4
HDAC1-208ENST00000482310 MT2AP02795 61 aa6.28□□□□□ -1.4
HDAC1-208ENST00000482310 NDUFC1O43677 76 aa6.27□□□□□ -1.41
HDAC1-208ENST00000482310 MT1FP04733 61 aa6.25□□□□□ -1.41
HDAC1-208ENST00000482310 ACYP2P14621 99 aa6.25□□□□□ -1.41
HDAC1-208ENST00000482310 KRTAP10-10P60014 251 aa6.25□□□□□ -1.41
HDAC1-208ENST00000482310 SPANXA2-OT1Q8N9U9 137 aa6.25□□□□□ -1.41
HDAC1-208ENST00000482310 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.23□□□□□ -1.41
HDAC1-208ENST00000482310 H7BZZ5 65 aa6.23□□□□□ -1.41
HDAC1-208ENST00000482310 KRTAP9-7A8MTY7 169 aa6.21□□□□□ -1.42
HDAC1-208ENST00000482310 CHKB-CPT1BH3BT56 60 aa6.21□□□□□ -1.42
HDAC1-208ENST00000482310 SSPOA2VEC9 5147 aa6.2□□□□□ -1.42
HDAC1-208ENST00000482310 USH2AO75445 5202 aa6.17□□□□□ -1.42
HDAC1-208ENST00000482310 KRTAP4-8Q9BYQ9 185 aa6.14□□□□□ -1.43
HDAC1-208ENST00000482310 COA5Q86WW8 74 aa6.13□□□□□ -1.43
HDAC1-208ENST00000482310 ADM2Q7Z4H4 148 aa6.11□□□□□ -1.43
HDAC1-208ENST00000482310 SPTSSBQ8NFR3 76 aa6.1□□□□□ -1.43
HDAC1-208ENST00000482310 KRTAP9-3Q9BYQ3 159 aa6.09□□□□□ -1.43
HDAC1-208ENST00000482310 FCGBPQ9Y6R7 5405 aaPredicted RBP6.05□□□□□ -1.44
HDAC1-208ENST00000482310 H0YAA0 97 aa6.04□□□□□ -1.44
HDAC1-208ENST00000482310 ATP5EP56381 51 aaPredicted RBP6.02□□□□□ -1.45
HDAC1-208ENST00000482310 TMEM258P61165 79 aa6.02□□□□□ -1.45
HDAC1-208ENST00000482310 P0C880 135 aa6.01□□□□□ -1.45
HDAC1-208ENST00000482310 PCP4P48539 62 aa5.99□□□□□ -1.45
HDAC1-208ENST00000482310 KRTAP19-1Q8IUB9 90 aa5.98□□□□□ -1.45
HDAC1-208ENST00000482310 KRTAP4-12Q9BQ66 201 aa5.96□□□□□ -1.46
HDAC1-208ENST00000482310 CRIPTQ9P021 101 aa5.92□□□□□ -1.46
HDAC1-208ENST00000482310 SYNE2Q8WXH0 6885 aaKnown RBP5.91□□□□□ -1.46
HDAC1-208ENST00000482310 SPRR2GQ9BYE4 73 aa5.91□□□□□ -1.46
HDAC1-208ENST00000482310 M0QZ58 72 aa5.9□□□□□ -1.46
HDAC1-208ENST00000482310 R4GN34 69 aa5.9□□□□□ -1.46
HDAC1-208ENST00000482310 MACF1Q9UPN3 7388 aaKnown RBP5.9□□□□□ -1.47
HDAC1-208ENST00000482310 SEC61GP60059 68 aa5.87□□□□□ -1.47
HDAC1-208ENST00000482310 LCE3BQ5TA77 95 aa5.87□□□□□ -1.47
HDAC1-208ENST00000482310 H3BS24 57 aa5.86□□□□□ -1.47
HDAC1-208ENST00000482310 SERP1Q9Y6X1 66 aa5.85□□□□□ -1.47
HDAC1-208ENST00000482310 LINC01554Q52M75 96 aa5.84□□□□□ -1.47
HDAC1-208ENST00000482310 Q5VV11 94 aa5.84□□□□□ -1.47
HDAC1-208ENST00000482310 A0A1B0GU69 56 aa5.81□□□□□ -1.48
HDAC1-208ENST00000482310 MT1BP07438 61 aa5.81□□□□□ -1.48
HDAC1-208ENST00000482310 KRTAP19-8Q3LI54 63 aa5.81□□□□□ -1.48
HDAC1-208ENST00000482310 KRTAP19-6Q3LI70 58 aa5.77□□□□□ -1.49
HDAC1-208ENST00000482310 KRTAP13-4Q3LI77 160 aa5.76□□□□□ -1.49
HDAC1-208ENST00000482310 A0A1B0GU33 70 aa5.73□□□□□ -1.49
HDAC1-208ENST00000482310 SPATA8Q6RVD6 105 aa5.72□□□□□ -1.49
HDAC1-208ENST00000482310 KRTAP9-9Q9BYP9 154 aa5.72□□□□□ -1.49
HDAC1-208ENST00000482310 KRTAP9-4Q9BYQ2 154 aa5.72□□□□□ -1.49
HDAC1-208ENST00000482310 LINC01558Q9Y6Z2 57 aa5.72□□□□□ -1.49
HDAC1-208ENST00000482310 PRR15LQ9BU68 103 aa5.71□□□□□ -1.5
HDAC1-208ENST00000482310 PLAC4Q8WY50 150 aa5.7□□□□□ -1.5
HDAC1-208ENST00000482310 A0A0D9SG42 100 aa5.68□□□□□ -1.5
HDAC1-208ENST00000482310 KRTAP6-3Q3LI67 103 aa5.68□□□□□ -1.5
HDAC1-208ENST00000482310 A6NN06 94 aa5.63□□□□□ -1.51
HDAC1-208ENST00000482310 SMIM26A0A096LP01 95 aa5.61□□□□□ -1.51
HDAC1-208ENST00000482310 KRTAP4-8A0A0G2JLE6 195 aa5.61□□□□□ -1.51
HDAC1-208ENST00000482310 PSPHP1O15172 72 aa5.61□□□□□ -1.51
HDAC1-208ENST00000482310 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
HDAC1-208ENST00000482310 V9GYY9 64 aa5.6□□□□□ -1.51
HDAC1-208ENST00000482310 A8MU10 97 aa5.58□□□□□ -1.52
HDAC1-208ENST00000482310 KRTAP10-5P60370 271 aa5.58□□□□□ -1.52
HDAC1-208ENST00000482310 Q1T7F1 81 aa5.58□□□□□ -1.52
HDAC1-208ENST00000482310 RPS28P62857 69 aaKnown RBP5.57□□□□□ -1.52
HDAC1-208ENST00000482310 NEBP20929 6669 aa5.57□□□□□ -1.52
HDAC1-208ENST00000482310 SPINT4Q6UDR6 99 aa5.56□□□□□ -1.52
HDAC1-208ENST00000482310 MT1XP80297 61 aa5.54□□□□□ -1.52
HDAC1-208ENST00000482310 UQCR11O14957 56 aa5.52□□□□□ -1.53
HDAC1-208ENST00000482310 PRO2289Q9P1D8 64 aa5.51□□□□□ -1.53
HDAC1-208ENST00000482310 KRTAP12-1P59990 96 aa5.5□□□□□ -1.53
HDAC1-208ENST00000482310 LCE1DQ5T752 114 aa5.5□□□□□ -1.53
HDAC1-208ENST00000482310 CAMK2N1Q7Z7J9 78 aa5.5□□□□□ -1.53
HDAC1-208ENST00000482310 KRTAP12-2P59991 146 aa5.49□□□□□ -1.53
HDAC1-208ENST00000482310 MUC12Q9UKN1 5478 aa5.49□□□□□ -1.53
HDAC1-208ENST00000482310 SVIPQ8NHG7 77 aa5.47□□□□□ -1.53
HDAC1-208ENST00000482310 MIR22HGQ0VDD5 57 aa5.46□□□□□ -1.54
HDAC1-208ENST00000482310 LCE4AQ5TA78 99 aa5.46□□□□□ -1.54
HDAC1-208ENST00000482310 A6NED7 52 aa5.42□□□□□ -1.54
HDAC1-208ENST00000482310 KRTAP4-7Q9BYR0 210 aa5.4□□□□□ -1.54
HDAC1-208ENST00000482310 KRTAP20-1Q3LI63 56 aa5.39□□□□□ -1.55
HDAC1-208ENST00000482310 KRTAP10-7P60409 375 aaPredicted RBP5.33□□□□□ -1.56
HDAC1-208ENST00000482310 KRTAP4-9Q9BYQ8 210 aa5.32□□□□□ -1.56
HDAC1-208ENST00000482310 KRTAP5-9P26371 169 aa5.31□□□□□ -1.56
HDAC1-208ENST00000482310 KMT2DO14686 5537 aa5.29□□□□□ -1.56
HDAC1-208ENST00000482310 K7ERS5 55 aa5.27□□□□□ -1.57
HDAC1-208ENST00000482310 MDN1Q9NU22 5596 aa5.25□□□□□ -1.57
HDAC1-208ENST00000482310 KRTAP10-12P60413 245 aa5.23□□□□□ -1.57
HDAC1-208ENST00000482310 C10orf95Q9H7T3 257 aa5.23□□□□□ -1.57
HDAC1-208ENST00000482310 CDC42SE1Q9NRR8 79 aa5.22□□□□□ -1.57
HDAC1-208ENST00000482310 KRTAP8-1Q8IUC2 63 aa5.19□□□□□ -1.58
HDAC1-208ENST00000482310 LCE5AQ5TCM9 118 aa5.18□□□□□ -1.58
HDAC1-208ENST00000482310 KRTAP2-3P0C7H8 128 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms