RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 CSAG1Q6PB30 78 aa7.1□□□□□ -1.27
ABCF3-213ENST00000480539 KRTAP9-3Q9BYQ3 159 aa7.1□□□□□ -1.27
ABCF3-213ENST00000480539 KRTAP9-6A0A140TA67 174 aa7.07□□□□□ -1.28
ABCF3-213ENST00000480539 USH2AO75445 5202 aa7.05□□□□□ -1.28
ABCF3-213ENST00000480539 CRCT1Q9UGL9 99 aa7.04□□□□□ -1.28
ABCF3-213ENST00000480539 SNURFQ9Y675 71 aa7.03□□□□□ -1.28
ABCF3-213ENST00000480539 SERP2Q8N6R1 65 aa7.02□□□□□ -1.29
ABCF3-213ENST00000480539 DMAC1Q96GE9 116 aa7.02□□□□□ -1.29
ABCF3-213ENST00000480539 NDUFC1O43677 76 aa7.01□□□□□ -1.29
ABCF3-213ENST00000480539 FSIP2Q5CZC0 6907 aa7□□□□□ -1.29
ABCF3-213ENST00000480539 C20orf197Q8N268 126 aa6.99□□□□□ -1.29
ABCF3-213ENST00000480539 SSPOA2VEC9 5147 aa6.9□□□□□ -1.3
ABCF3-213ENST00000480539 COX7CP15954 63 aa6.88□□□□□ -1.31
ABCF3-213ENST00000480539 ACYP2P14621 99 aa6.87□□□□□ -1.31
ABCF3-213ENST00000480539 KRTAP19-1Q8IUB9 90 aa6.87□□□□□ -1.31
ABCF3-213ENST00000480539 H0YAA0 97 aa6.86□□□□□ -1.31
ABCF3-213ENST00000480539 ADM2Q7Z4H4 148 aa6.84□□□□□ -1.31
ABCF3-213ENST00000480539 SPANXA2-OT1Q8N9U9 137 aa6.84□□□□□ -1.31
ABCF3-213ENST00000480539 ANAPC13Q9BS18 74 aa6.81□□□□□ -1.32
ABCF3-213ENST00000480539 CHKB-CPT1BH3BT56 60 aa6.8□□□□□ -1.32
ABCF3-213ENST00000480539 SPRR2GQ9BYE4 73 aa6.8□□□□□ -1.32
ABCF3-213ENST00000480539 CYSTM1Q9H1C7 97 aa6.79□□□□□ -1.32
ABCF3-213ENST00000480539 CRIPTQ9P021 101 aa6.76□□□□□ -1.33
ABCF3-213ENST00000480539 SPTSSBQ8NFR3 76 aa6.74□□□□□ -1.33
ABCF3-213ENST00000480539 H7BZZ5 65 aa6.73□□□□□ -1.33
ABCF3-213ENST00000480539 P0C880 135 aa6.73□□□□□ -1.33
ABCF3-213ENST00000480539 Q5VV11 94 aa6.72□□□□□ -1.33
ABCF3-213ENST00000480539 FCGBPQ9Y6R7 5405 aaPredicted RBP6.72□□□□□ -1.33
ABCF3-213ENST00000480539 MT1BP07438 61 aa6.71□□□□□ -1.34
ABCF3-213ENST00000480539 KRTAP19-8Q3LI54 63 aa6.71□□□□□ -1.34
ABCF3-213ENST00000480539 KRTAP19-6Q3LI70 58 aa6.71□□□□□ -1.34
ABCF3-213ENST00000480539 COA5Q86WW8 74 aa6.69□□□□□ -1.34
ABCF3-213ENST00000480539 CCDC179H3BU77 68 aa6.68□□□□□ -1.34
ABCF3-213ENST00000480539 R4GN34 69 aa6.64□□□□□ -1.35
ABCF3-213ENST00000480539 M0QZ58 72 aa6.62□□□□□ -1.35
ABCF3-213ENST00000480539 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.55□□□□□ -1.36
ABCF3-213ENST00000480539 A6NN06 94 aa6.53□□□□□ -1.36
ABCF3-213ENST00000480539 LINC01554Q52M75 96 aa6.53□□□□□ -1.36
ABCF3-213ENST00000480539 KRTAP10-5P60370 271 aa6.49□□□□□ -1.37
ABCF3-213ENST00000480539 ATP5EP56381 51 aaPredicted RBP6.48□□□□□ -1.37
ABCF3-213ENST00000480539 PLAC4Q8WY50 150 aa6.45□□□□□ -1.38
ABCF3-213ENST00000480539 SEC61GP60059 68 aa6.43□□□□□ -1.38
ABCF3-213ENST00000480539 TMEM258P61165 79 aa6.42□□□□□ -1.38
ABCF3-213ENST00000480539 KRTAP13-4Q3LI77 160 aa6.42□□□□□ -1.38
ABCF3-213ENST00000480539 SERP1Q9Y6X1 66 aa6.41□□□□□ -1.38
ABCF3-213ENST00000480539 KRTAP9-7A8MTY7 169 aa6.39□□□□□ -1.39
ABCF3-213ENST00000480539 MT1XP80297 61 aa6.36□□□□□ -1.39
ABCF3-213ENST00000480539 MACF1Q9UPN3 7388 aaKnown RBP6.36□□□□□ -1.39
ABCF3-213ENST00000480539 PRO2289Q9P1D8 64 aa6.34□□□□□ -1.39
ABCF3-213ENST00000480539 A0A1B0GU69 56 aa6.31□□□□□ -1.4
ABCF3-213ENST00000480539 H3BS24 57 aa6.31□□□□□ -1.4
ABCF3-213ENST00000480539 A0A1B0GU33 70 aa6.3□□□□□ -1.4
ABCF3-213ENST00000480539 SPATA8Q6RVD6 105 aa6.28□□□□□ -1.4
ABCF3-213ENST00000480539 A0A0D9SG42 100 aa6.26□□□□□ -1.41
ABCF3-213ENST00000480539 SYNE2Q8WXH0 6885 aaKnown RBP6.24□□□□□ -1.41
ABCF3-213ENST00000480539 PRR15LQ9BU68 103 aa6.19□□□□□ -1.42
ABCF3-213ENST00000480539 LINC01558Q9Y6Z2 57 aa6.19□□□□□ -1.42
ABCF3-213ENST00000480539 KRTAP6-3Q3LI67 103 aa6.18□□□□□ -1.42
ABCF3-213ENST00000480539 CAMK2N1Q7Z7J9 78 aa6.16□□□□□ -1.42
ABCF3-213ENST00000480539 SPINT4Q6UDR6 99 aa6.13□□□□□ -1.43
ABCF3-213ENST00000480539 KMT2DO14686 5537 aa6.13□□□□□ -1.43
ABCF3-213ENST00000480539 A8MU10 97 aa6.12□□□□□ -1.43
ABCF3-213ENST00000480539 PCP4P48539 62 aa6.12□□□□□ -1.43
ABCF3-213ENST00000480539 KRTAP12-2P59991 146 aa6.12□□□□□ -1.43
ABCF3-213ENST00000480539 SMIM26A0A096LP01 95 aa6.11□□□□□ -1.43
ABCF3-213ENST00000480539 KRTAP12-1P59990 96 aa6.11□□□□□ -1.43
ABCF3-213ENST00000480539 KRTAP10-7P60409 375 aaPredicted RBP6.09□□□□□ -1.43
ABCF3-213ENST00000480539 KRTAP5-9P26371 169 aa6.02□□□□□ -1.45
ABCF3-213ENST00000480539 KRTAP10-12P60413 245 aa6.02□□□□□ -1.45
ABCF3-213ENST00000480539 MUC12Q9UKN1 5478 aa6.01□□□□□ -1.45
ABCF3-213ENST00000480539 KRTAP8-1Q8IUC2 63 aa6.01□□□□□ -1.45
ABCF3-213ENST00000480539 KRTAP4-8A0A0G2JLE6 195 aa6□□□□□ -1.45
ABCF3-213ENST00000480539 KRTAP4-8Q9BYQ9 185 aa6□□□□□ -1.45
ABCF3-213ENST00000480539 UQCR11O14957 56 aa5.99□□□□□ -1.45
ABCF3-213ENST00000480539 PSPHP1O15172 72 aa5.97□□□□□ -1.45
ABCF3-213ENST00000480539 V9GYY9 64 aa5.97□□□□□ -1.45
ABCF3-213ENST00000480539 Q1T7F1 81 aa5.96□□□□□ -1.46
ABCF3-213ENST00000480539 SPRR2FQ96RM1 72 aa5.95□□□□□ -1.46
ABCF3-213ENST00000480539 MDN1Q9NU22 5596 aa5.93□□□□□ -1.46
ABCF3-213ENST00000480539 MIR22HGQ0VDD5 57 aa5.89□□□□□ -1.47
ABCF3-213ENST00000480539 RPS28P62857 69 aaKnown RBP5.85□□□□□ -1.47
ABCF3-213ENST00000480539 NEBP20929 6669 aa5.85□□□□□ -1.47
ABCF3-213ENST00000480539 SPRR2EP22531 72 aa5.8□□□□□ -1.48
ABCF3-213ENST00000480539 SPRR2BP35325 72 aa5.8□□□□□ -1.48
ABCF3-213ENST00000480539 SPRR2AP35326 72 aa5.8□□□□□ -1.48
ABCF3-213ENST00000480539 C10orf95Q9H7T3 257 aa5.8□□□□□ -1.48
ABCF3-213ENST00000480539 A6NED7 52 aa5.77□□□□□ -1.49
ABCF3-213ENST00000480539 LCE1AQ5T7P2 110 aa5.73□□□□□ -1.49
ABCF3-213ENST00000480539 TNP1P09430 55 aa5.72□□□□□ -1.49
ABCF3-213ENST00000480539 K7ERS5 55 aa5.71□□□□□ -1.5
ABCF3-213ENST00000480539 KRTAP19-7Q3SYF9 63 aa5.68□□□□□ -1.5
ABCF3-213ENST00000480539 LCE3AQ5TA76 89 aa5.65□□□□□ -1.5
ABCF3-213ENST00000480539 KRTAP20-1Q3LI63 56 aa5.63□□□□□ -1.51
ABCF3-213ENST00000480539 MT1EP04732 61 aa5.62□□□□□ -1.51
ABCF3-213ENST00000480539 KRTAP19-5Q3LI72 72 aa5.62□□□□□ -1.51
ABCF3-213ENST00000480539 SPRR2DP22532 72 aa5.6□□□□□ -1.51
ABCF3-213ENST00000480539 CDC42SE1Q9NRR8 79 aa5.55□□□□□ -1.52
ABCF3-213ENST00000480539 LOC100996750A0A140TA64 210 aa5.53□□□□□ -1.52
ABCF3-213ENST00000480539 KRTAP25-1Q3LHN0 102 aa5.53□□□□□ -1.52
ABCF3-213ENST00000480539 KRTAP4-6Q9BYQ5 205 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 1753.9 ms