RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 FAT4Q6V0I7 4981 aa4.54□□□□□ -1.68
NUDCD3-208ENST00000480209 KRTAP19-4Q3LI73 84 aa4.53□□□□□ -1.68
NUDCD3-208ENST00000480209 FLGP20930 4061 aaPredicted RBP4.53□□□□□ -1.68
NUDCD3-208ENST00000480209 H3BPC8 53 aa4.52□□□□□ -1.69
NUDCD3-208ENST00000480209 C20orf197Q8N268 126 aa4.52□□□□□ -1.69
NUDCD3-208ENST00000480209 KRTAP4-9Q9BYQ8 210 aa4.52□□□□□ -1.69
NUDCD3-208ENST00000480209 SNURFQ9Y675 71 aa4.52□□□□□ -1.69
NUDCD3-208ENST00000480209 COX7CP15954 63 aa4.51□□□□□ -1.69
NUDCD3-208ENST00000480209 ANAPC13Q9BS18 74 aa4.51□□□□□ -1.69
NUDCD3-208ENST00000480209 C4orf26Q17RF5 130 aa4.5□□□□□ -1.69
NUDCD3-208ENST00000480209 CYSTM1Q9H1C7 97 aa4.5□□□□□ -1.69
NUDCD3-208ENST00000480209 CCDC179H3BU77 68 aa4.47□□□□□ -1.69
NUDCD3-208ENST00000480209 COX6B2Q6YFQ2 88 aa4.47□□□□□ -1.69
NUDCD3-208ENST00000480209 RBM12B-AS1Q9P1G2 102 aa4.47□□□□□ -1.69
NUDCD3-208ENST00000480209 FAM236DA0A1B0GTK5 79 aa4.45□□□□□ -1.7
NUDCD3-208ENST00000480209 FAM236CP0DP71 79 aa4.45□□□□□ -1.7
NUDCD3-208ENST00000480209 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
NUDCD3-208ENST00000480209 MT1HP80294 61 aa4.44□□□□□ -1.7
NUDCD3-208ENST00000480209 H7BZZ5 65 aa4.41□□□□□ -1.7
NUDCD3-208ENST00000480209 LCE4AQ5TA78 99 aa4.41□□□□□ -1.7
NUDCD3-208ENST00000480209 H1FX-AS1Q4G0G2 97 aa4.4□□□□□ -1.71
NUDCD3-208ENST00000480209 DMAC1Q96GE9 116 aa4.39□□□□□ -1.71
NUDCD3-208ENST00000480209 SPANXA2-OT1Q8N9U9 137 aa4.36□□□□□ -1.71
NUDCD3-208ENST00000480209 KRTAP4-11Q9BYQ6 195 aa4.36□□□□□ -1.71
NUDCD3-208ENST00000480209 A8MUN3 132 aa4.35□□□□□ -1.71
NUDCD3-208ENST00000480209 NDUFC1O43677 76 aa4.35□□□□□ -1.71
NUDCD3-208ENST00000480209 LCA10Q71F78 164 aa4.34□□□□□ -1.71
NUDCD3-208ENST00000480209 S4R3F8 94 aa4.34□□□□□ -1.71
NUDCD3-208ENST00000480209 M0R2T5 61 aa4.31□□□□□ -1.72
NUDCD3-208ENST00000480209 KRTAP10-6P60371 365 aaPredicted RBP4.29□□□□□ -1.72
NUDCD3-208ENST00000480209 KRTAP9-7A8MTY7 169 aa4.28□□□□□ -1.72
NUDCD3-208ENST00000480209 ACYP2P14621 99 aa4.28□□□□□ -1.72
NUDCD3-208ENST00000480209 TMEM258P61165 79 aa4.27□□□□□ -1.73
NUDCD3-208ENST00000480209 COA5Q86WW8 74 aa4.26□□□□□ -1.73
NUDCD3-208ENST00000480209 KRTAP9-8Q9BYQ0 159 aa4.25□□□□□ -1.73
NUDCD3-208ENST00000480209 MT2AP02795 61 aa4.23□□□□□ -1.73
NUDCD3-208ENST00000480209 ATP5EP56381 51 aaPredicted RBP4.23□□□□□ -1.73
NUDCD3-208ENST00000480209 LCE5AQ5TCM9 118 aa4.23□□□□□ -1.73
NUDCD3-208ENST00000480209 CSAG1Q6PB30 78 aa4.22□□□□□ -1.73
NUDCD3-208ENST00000480209 MT1FP04733 61 aa4.21□□□□□ -1.74
NUDCD3-208ENST00000480209 CHKB-CPT1BH3BT56 60 aa4.2□□□□□ -1.74
NUDCD3-208ENST00000480209 H0YAA0 97 aa4.14□□□□□ -1.75
NUDCD3-208ENST00000480209 ADM2Q7Z4H4 148 aa4.14□□□□□ -1.75
NUDCD3-208ENST00000480209 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
NUDCD3-208ENST00000480209 SPTSSBQ8NFR3 76 aa4.13□□□□□ -1.75
NUDCD3-208ENST00000480209 KRTAP9-3Q9BYQ3 159 aa4.13□□□□□ -1.75
NUDCD3-208ENST00000480209 SERP1Q9Y6X1 66 aa4.13□□□□□ -1.75
NUDCD3-208ENST00000480209 KRTAP10-10P60014 251 aa4.12□□□□□ -1.75
NUDCD3-208ENST00000480209 P0C880 135 aa4.11□□□□□ -1.75
NUDCD3-208ENST00000480209 USH2AO75445 5202 aa4.03□□□□□ -1.76
NUDCD3-208ENST00000480209 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.76
NUDCD3-208ENST00000480209 SPRR2GQ9BYE4 73 aa4.02□□□□□ -1.77
NUDCD3-208ENST00000480209 LINC01558Q9Y6Z2 57 aa4.02□□□□□ -1.77
NUDCD3-208ENST00000480209 RPS28P62857 69 aaKnown RBP4.01□□□□□ -1.77
NUDCD3-208ENST00000480209 KRTAP13-4Q3LI77 160 aa4□□□□□ -1.77
NUDCD3-208ENST00000480209 A0A1B0GU69 56 aa3.99□□□□□ -1.77
NUDCD3-208ENST00000480209 CRIPTQ9P021 101 aa3.99□□□□□ -1.77
NUDCD3-208ENST00000480209 SMIM26A0A096LP01 95 aa3.98□□□□□ -1.77
NUDCD3-208ENST00000480209 M0QZ58 72 aa3.97□□□□□ -1.77
NUDCD3-208ENST00000480209 SEC61GP60059 68 aa3.97□□□□□ -1.77
NUDCD3-208ENST00000480209 R4GN34 69 aa3.96□□□□□ -1.78
NUDCD3-208ENST00000480209 MT1BP07438 61 aa3.95□□□□□ -1.78
NUDCD3-208ENST00000480209 Q1T7F1 81 aa3.95□□□□□ -1.78
NUDCD3-208ENST00000480209 KRTAP19-8Q3LI54 63 aa3.95□□□□□ -1.78
NUDCD3-208ENST00000480209 PRR15LQ9BU68 103 aa3.95□□□□□ -1.78
NUDCD3-208ENST00000480209 A0A1B0GU33 70 aa3.93□□□□□ -1.78
NUDCD3-208ENST00000480209 PSPHP1O15172 72 aa3.92□□□□□ -1.78
NUDCD3-208ENST00000480209 SPATA8Q6RVD6 105 aa3.92□□□□□ -1.78
NUDCD3-208ENST00000480209 SSPOA2VEC9 5147 aa3.91□□□□□ -1.78
NUDCD3-208ENST00000480209 LINC01554Q52M75 96 aa3.91□□□□□ -1.78
NUDCD3-208ENST00000480209 Q5VV11 94 aa3.91□□□□□ -1.78
NUDCD3-208ENST00000480209 V9GYY9 64 aa3.9□□□□□ -1.79
NUDCD3-208ENST00000480209 FSIP2Q5CZC0 6907 aa3.9□□□□□ -1.79
NUDCD3-208ENST00000480209 A8MU10 97 aa3.86□□□□□ -1.79
NUDCD3-208ENST00000480209 A0A0D9SG42 100 aa3.85□□□□□ -1.79
NUDCD3-208ENST00000480209 UQCR11O14957 56 aa3.82□□□□□ -1.8
NUDCD3-208ENST00000480209 A6NN06 94 aa3.81□□□□□ -1.8
NUDCD3-208ENST00000480209 CRCT1Q9UGL9 99 aa3.81□□□□□ -1.8
NUDCD3-208ENST00000480209 KRTAP12-1P59990 96 aa3.8□□□□□ -1.8
NUDCD3-208ENST00000480209 KRTAP12-2P59991 146 aa3.8□□□□□ -1.8
NUDCD3-208ENST00000480209 KRTAP19-6Q3LI70 58 aa3.8□□□□□ -1.8
NUDCD3-208ENST00000480209 PRAC1Q96KF2 57 aa3.8□□□□□ -1.8
NUDCD3-208ENST00000480209 FCGBPQ9Y6R7 5405 aaPredicted RBP3.78□□□□□ -1.8
NUDCD3-208ENST00000480209 MIR22HGQ0VDD5 57 aa3.78□□□□□ -1.8
NUDCD3-208ENST00000480209 PLAC4Q8WY50 150 aa3.78□□□□□ -1.8
NUDCD3-208ENST00000480209 A6NED7 52 aa3.77□□□□□ -1.81
NUDCD3-208ENST00000480209 MT1XP80297 61 aa3.77□□□□□ -1.81
NUDCD3-208ENST00000480209 KRTAP10-5P60370 271 aa3.76□□□□□ -1.81
NUDCD3-208ENST00000480209 SPINT4Q6UDR6 99 aa3.75□□□□□ -1.81
NUDCD3-208ENST00000480209 CDC42SE1Q9NRR8 79 aa3.69□□□□□ -1.82
NUDCD3-208ENST00000480209 CAMK2N1Q7Z7J9 78 aa3.68□□□□□ -1.82
NUDCD3-208ENST00000480209 PRO2289Q9P1D8 64 aa3.65□□□□□ -1.83
NUDCD3-208ENST00000480209 MACF1Q9UPN3 7388 aaKnown RBP3.64□□□□□ -1.83
NUDCD3-208ENST00000480209 C10orf95Q9H7T3 257 aa3.62□□□□□ -1.83
NUDCD3-208ENST00000480209 KMT2DO14686 5537 aa3.62□□□□□ -1.83
NUDCD3-208ENST00000480209 KRTAP10-7P60409 375 aaPredicted RBP3.61□□□□□ -1.83
NUDCD3-208ENST00000480209 BRK1Q8WUW1 75 aa3.6□□□□□ -1.83
NUDCD3-208ENST00000480209 K7ERS5 55 aa3.58□□□□□ -1.84
NUDCD3-208ENST00000480209 KRTAP10-12P60413 245 aa3.56□□□□□ -1.84
NUDCD3-208ENST00000480209 SYNE2Q8WXH0 6885 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms