RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 CSAG1Q6PB30 78 aa5.12□□□□□ -1.59
ATG4B-219ENST00000479941 SSPOA2VEC9 5147 aa5.1□□□□□ -1.59
ATG4B-219ENST00000479941 KRTAP9-3Q9BYQ3 159 aa5.09□□□□□ -1.59
ATG4B-219ENST00000479941 CRCT1Q9UGL9 99 aa5.09□□□□□ -1.59
ATG4B-219ENST00000479941 KRTAP3-3Q9BYR6 98 aa5.07□□□□□ -1.6
ATG4B-219ENST00000479941 NDUFC1O43677 76 aa5.04□□□□□ -1.6
ATG4B-219ENST00000479941 SERP2Q8N6R1 65 aa5.03□□□□□ -1.6
ATG4B-219ENST00000479941 DMAC1Q96GE9 116 aa5.03□□□□□ -1.6
ATG4B-219ENST00000479941 LCE2BO14633 110 aa5.01□□□□□ -1.61
ATG4B-219ENST00000479941 SNURFQ9Y675 71 aa4.99□□□□□ -1.61
ATG4B-219ENST00000479941 C20orf197Q8N268 126 aa4.98□□□□□ -1.61
ATG4B-219ENST00000479941 H0YAA0 97 aa4.96□□□□□ -1.62
ATG4B-219ENST00000479941 ACYP2P14621 99 aa4.95□□□□□ -1.62
ATG4B-219ENST00000479941 COX7CP15954 63 aa4.93□□□□□ -1.62
ATG4B-219ENST00000479941 SPANXA2-OT1Q8N9U9 137 aa4.93□□□□□ -1.62
ATG4B-219ENST00000479941 KRTAP19-1Q8IUB9 90 aa4.91□□□□□ -1.62
ATG4B-219ENST00000479941 CRIPTQ9P021 101 aa4.91□□□□□ -1.62
ATG4B-219ENST00000479941 SPRR2GQ9BYE4 73 aa4.89□□□□□ -1.63
ATG4B-219ENST00000479941 FCGBPQ9Y6R7 5405 aaPredicted RBP4.88□□□□□ -1.63
ATG4B-219ENST00000479941 ADM2Q7Z4H4 148 aa4.88□□□□□ -1.63
ATG4B-219ENST00000479941 SPTSSBQ8NFR3 76 aa4.87□□□□□ -1.63
ATG4B-219ENST00000479941 CHKB-CPT1BH3BT56 60 aa4.86□□□□□ -1.63
ATG4B-219ENST00000479941 ANAPC13Q9BS18 74 aa4.85□□□□□ -1.63
ATG4B-219ENST00000479941 KRTAP19-8Q3LI54 63 aa4.82□□□□□ -1.64
ATG4B-219ENST00000479941 KRTAP19-6Q3LI70 58 aa4.82□□□□□ -1.64
ATG4B-219ENST00000479941 Q5VV11 94 aa4.82□□□□□ -1.64
ATG4B-219ENST00000479941 H7BZZ5 65 aa4.8□□□□□ -1.64
ATG4B-219ENST00000479941 P0C880 135 aa4.79□□□□□ -1.64
ATG4B-219ENST00000479941 KRTAP9-7A8MTY7 169 aa4.78□□□□□ -1.64
ATG4B-219ENST00000479941 MT1BP07438 61 aa4.78□□□□□ -1.64
ATG4B-219ENST00000479941 KRTAP3-2Q9BYR7 98 aa4.78□□□□□ -1.64
ATG4B-219ENST00000479941 CYSTM1Q9H1C7 97 aa4.78□□□□□ -1.64
ATG4B-219ENST00000479941 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.77□□□□□ -1.65
ATG4B-219ENST00000479941 R4GN34 69 aa4.76□□□□□ -1.65
ATG4B-219ENST00000479941 COA5Q86WW8 74 aa4.75□□□□□ -1.65
ATG4B-219ENST00000479941 SYNE2Q8WXH0 6885 aaKnown RBP4.73□□□□□ -1.65
ATG4B-219ENST00000479941 CCDC179H3BU77 68 aa4.73□□□□□ -1.65
ATG4B-219ENST00000479941 M0QZ58 72 aa4.72□□□□□ -1.65
ATG4B-219ENST00000479941 MACF1Q9UPN3 7388 aaKnown RBP4.7□□□□□ -1.66
ATG4B-219ENST00000479941 A6NN06 94 aa4.68□□□□□ -1.66
ATG4B-219ENST00000479941 ATP5EP56381 51 aaPredicted RBP4.65□□□□□ -1.67
ATG4B-219ENST00000479941 PLAC4Q8WY50 150 aa4.65□□□□□ -1.67
ATG4B-219ENST00000479941 SEC61GP60059 68 aa4.64□□□□□ -1.67
ATG4B-219ENST00000479941 KRTAP10-5P60370 271 aa4.64□□□□□ -1.67
ATG4B-219ENST00000479941 LINC01554Q52M75 96 aa4.63□□□□□ -1.67
ATG4B-219ENST00000479941 SERP1Q9Y6X1 66 aa4.62□□□□□ -1.67
ATG4B-219ENST00000479941 TMEM258P61165 79 aa4.59□□□□□ -1.67
ATG4B-219ENST00000479941 PRO2289Q9P1D8 64 aa4.58□□□□□ -1.68
ATG4B-219ENST00000479941 KRTAP13-4Q3LI77 160 aa4.54□□□□□ -1.68
ATG4B-219ENST00000479941 MT1XP80297 61 aa4.53□□□□□ -1.68
ATG4B-219ENST00000479941 A0A1B0GU33 70 aa4.52□□□□□ -1.69
ATG4B-219ENST00000479941 A0A1B0GU69 56 aa4.52□□□□□ -1.69
ATG4B-219ENST00000479941 KMT2DO14686 5537 aa4.47□□□□□ -1.69
ATG4B-219ENST00000479941 KRTAP6-3Q3LI67 103 aa4.46□□□□□ -1.7
ATG4B-219ENST00000479941 SPATA8Q6RVD6 105 aa4.46□□□□□ -1.7
ATG4B-219ENST00000479941 PRR15LQ9BU68 103 aa4.46□□□□□ -1.7
ATG4B-219ENST00000479941 LINC01558Q9Y6Z2 57 aa4.45□□□□□ -1.7
ATG4B-219ENST00000479941 MUC12Q9UKN1 5478 aa4.44□□□□□ -1.7
ATG4B-219ENST00000479941 NEBP20929 6669 aa4.44□□□□□ -1.7
ATG4B-219ENST00000479941 A0A0D9SG42 100 aa4.43□□□□□ -1.7
ATG4B-219ENST00000479941 KRTAP12-2P59991 146 aa4.41□□□□□ -1.7
ATG4B-219ENST00000479941 CAMK2N1Q7Z7J9 78 aa4.41□□□□□ -1.7
ATG4B-219ENST00000479941 SMIM26A0A096LP01 95 aa4.4□□□□□ -1.71
ATG4B-219ENST00000479941 SPINT4Q6UDR6 99 aa4.37□□□□□ -1.71
ATG4B-219ENST00000479941 PCP4P48539 62 aa4.36□□□□□ -1.71
ATG4B-219ENST00000479941 KRTAP12-1P59990 96 aa4.35□□□□□ -1.71
ATG4B-219ENST00000479941 MDN1Q9NU22 5596 aa4.35□□□□□ -1.71
ATG4B-219ENST00000479941 KRTAP5-9P26371 169 aa4.34□□□□□ -1.71
ATG4B-219ENST00000479941 A8MU10 97 aa4.33□□□□□ -1.72
ATG4B-219ENST00000479941 KRTAP10-7P60409 375 aaPredicted RBP4.33□□□□□ -1.72
ATG4B-219ENST00000479941 V9GYY9 64 aa4.33□□□□□ -1.72
ATG4B-219ENST00000479941 UQCR11O14957 56 aa4.32□□□□□ -1.72
ATG4B-219ENST00000479941 KRTAP10-12P60413 245 aa4.32□□□□□ -1.72
ATG4B-219ENST00000479941 KRTAP8-1Q8IUC2 63 aa4.3□□□□□ -1.72
ATG4B-219ENST00000479941 Q1T7F1 81 aa4.29□□□□□ -1.72
ATG4B-219ENST00000479941 KRTAP4-8A0A0G2JLE6 195 aa4.27□□□□□ -1.73
ATG4B-219ENST00000479941 KRTAP4-8Q9BYQ9 185 aa4.27□□□□□ -1.73
ATG4B-219ENST00000479941 SPRR2FQ96RM1 72 aa4.25□□□□□ -1.73
ATG4B-219ENST00000479941 RPS28P62857 69 aaKnown RBP4.24□□□□□ -1.73
ATG4B-219ENST00000479941 PSPHP1O15172 72 aa4.23□□□□□ -1.73
ATG4B-219ENST00000479941 MIR22HGQ0VDD5 57 aa4.22□□□□□ -1.73
ATG4B-219ENST00000479941 C10orf95Q9H7T3 257 aa4.15□□□□□ -1.75
ATG4B-219ENST00000479941 KRTAP20-1Q3LI63 56 aa4.14□□□□□ -1.75
ATG4B-219ENST00000479941 K7ERS5 55 aa4.13□□□□□ -1.75
ATG4B-219ENST00000479941 SPRR2EP22531 72 aa4.13□□□□□ -1.75
ATG4B-219ENST00000479941 SPRR2BP35325 72 aa4.13□□□□□ -1.75
ATG4B-219ENST00000479941 SPRR2AP35326 72 aa4.13□□□□□ -1.75
ATG4B-219ENST00000479941 TNP1P09430 55 aa4.12□□□□□ -1.75
ATG4B-219ENST00000479941 A6NED7 52 aa4.11□□□□□ -1.75
ATG4B-219ENST00000479941 LCE1AQ5T7P2 110 aa4.1□□□□□ -1.75
ATG4B-219ENST00000479941 KRTAP19-7Q3SYF9 63 aa4.05□□□□□ -1.76
ATG4B-219ENST00000479941 MT1EP04732 61 aa4.01□□□□□ -1.77
ATG4B-219ENST00000479941 SPRR2DP22532 72 aa4□□□□□ -1.77
ATG4B-219ENST00000479941 KRTAP19-5Q3LI72 72 aa4□□□□□ -1.77
ATG4B-219ENST00000479941 LCE3AQ5TA76 89 aa4□□□□□ -1.77
ATG4B-219ENST00000479941 KRTAP2-3P0C7H8 128 aa3.99□□□□□ -1.77
ATG4B-219ENST00000479941 KRTAP25-1Q3LHN0 102 aa3.99□□□□□ -1.77
ATG4B-219ENST00000479941 KRTAP2-4Q9BYR9 128 aa3.99□□□□□ -1.77
ATG4B-219ENST00000479941 CDC42SE1Q9NRR8 79 aa3.97□□□□□ -1.77
ATG4B-219ENST00000479941 KRTAP19-3Q7Z4W3 81 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms