RNA–Protein interactions for RNA: ENST00000479739.6

SH3YL1-222, Transcript of SH3 and SYLF domain containing 1, human

TSL 2

Gene SH3YL1, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3YL1-222	ENST00000479739	KRTAP16-1	A8MUX0	517 aa		5.16	□□□□□ -1.58
SH3YL1-222	ENST00000479739	MIR22HG	Q0VDD5	57 aa		5.15	□□□□□ -1.58
SH3YL1-222	ENST00000479739	HMCN2	Q8NDA2	5059 aa		5.15	□□□□□ -1.59
SH3YL1-222	ENST00000479739	MT1HL1	P0DM35	61 aa		5.15	□□□□□ -1.59
SH3YL1-222	ENST00000479739	CSAG1	Q6PB30	78 aa		5.14	□□□□□ -1.59
SH3YL1-222	ENST00000479739		A0A0A0MQY5	61 aa		5.13	□□□□□ -1.59
SH3YL1-222	ENST00000479739	IGKV2D-30	A0A075B6S6	120 aa		5.12	□□□□□ -1.59
SH3YL1-222	ENST00000479739	ROMO1	P60602	79 aa		5.12	□□□□□ -1.59
SH3YL1-222	ENST00000479739	KRTAP13-2	Q52LG2	175 aa		5.12	□□□□□ -1.59
SH3YL1-222	ENST00000479739	KRTAP10-8	P60410	259 aa		5.08	□□□□□ -1.6
SH3YL1-222	ENST00000479739	SPINK1	P00995	79 aa		5.07	□□□□□ -1.6
SH3YL1-222	ENST00000479739	KRTAP1-4	P0C5Y4	121 aa		5.06	□□□□□ -1.6
SH3YL1-222	ENST00000479739	RPS29	P62273	56 aa	Known RBP	5.04	□□□□□ -1.6
SH3YL1-222	ENST00000479739	TYMSOS	Q8TAI1	123 aa		5.02	□□□□□ -1.61
SH3YL1-222	ENST00000479739	LRP2	P98164	4655 aa		5.02	□□□□□ -1.61
SH3YL1-222	ENST00000479739	KRTAP25-1	Q3LHN0	102 aa		5.01	□□□□□ -1.61
SH3YL1-222	ENST00000479739	UBR4	Q5T4S7	5183 aa		5	□□□□□ -1.61
SH3YL1-222	ENST00000479739	LPA	P08519	4548 aa		4.96	□□□□□ -1.62
SH3YL1-222	ENST00000479739	LCE2B	O14633	110 aa		4.96	□□□□□ -1.62
SH3YL1-222	ENST00000479739	LINC00304	Q8N9R0	145 aa		4.95	□□□□□ -1.62
SH3YL1-222	ENST00000479739		P0C880	135 aa		4.93	□□□□□ -1.62
SH3YL1-222	ENST00000479739	C20orf166-AS1	Q96NR2	134 aa		4.92	□□□□□ -1.62
SH3YL1-222	ENST00000479739		A8MUU9	505 aa		4.92	□□□□□ -1.62
SH3YL1-222	ENST00000479739		A0A1B0GU33	70 aa		4.9	□□□□□ -1.63
SH3YL1-222	ENST00000479739		H0YAA0	97 aa		4.9	□□□□□ -1.63
SH3YL1-222	ENST00000479739	H1FX-AS1	Q4G0G2	97 aa		4.88	□□□□□ -1.63
SH3YL1-222	ENST00000479739		K7ERS5	55 aa		4.86	□□□□□ -1.63
SH3YL1-222	ENST00000479739	RNF213	Q63HN8	5207 aa		4.85	□□□□□ -1.63
SH3YL1-222	ENST00000479739	KRTAP3-1	Q9BYR8	98 aa		4.84	□□□□□ -1.64
SH3YL1-222	ENST00000479739	C9orf92	A6NGG3	77 aa		4.81	□□□□□ -1.64
SH3YL1-222	ENST00000479739	COX6B2	Q6YFQ2	88 aa		4.81	□□□□□ -1.64
SH3YL1-222	ENST00000479739	MUC17	Q685J3	4493 aa		4.77	□□□□□ -1.65
SH3YL1-222	ENST00000479739	MUC2	Q02817	5179 aa		4.77	□□□□□ -1.65
SH3YL1-222	ENST00000479739	TPRXL	Q17RH7	258 aa		4.76	□□□□□ -1.65
SH3YL1-222	ENST00000479739	NDUFAF8	A1L188	74 aa		4.72	□□□□□ -1.65
SH3YL1-222	ENST00000479739	RPL37	P61927	97 aa	Known RBP	4.71	□□□□□ -1.66
SH3YL1-222	ENST00000479739	KRTAP15-1	Q3LI76	137 aa		4.71	□□□□□ -1.66
SH3YL1-222	ENST00000479739	SPINT4	Q6UDR6	99 aa		4.68	□□□□□ -1.66
SH3YL1-222	ENST00000479739	KRTAP10-6	P60371	365 aa	Predicted RBP	4.66	□□□□□ -1.66
SH3YL1-222	ENST00000479739	SEC61B	P60468	96 aa	Known RBP	4.64	□□□□□ -1.67
SH3YL1-222	ENST00000479739	LUZP6	Q538Z0	58 aa		4.64	□□□□□ -1.67
SH3YL1-222	ENST00000479739	FAT4	Q6V0I7	4981 aa		4.63	□□□□□ -1.67
SH3YL1-222	ENST00000479739		S4R3F8	94 aa		4.63	□□□□□ -1.67
SH3YL1-222	ENST00000479739	XP32	Q5T750	250 aa		4.61	□□□□□ -1.67
SH3YL1-222	ENST00000479739	LCE2A	Q5TA79	106 aa	Predicted RBP	4.61	□□□□□ -1.67
SH3YL1-222	ENST00000479739	LOC100996750	A0A140TA64	210 aa		4.6	□□□□□ -1.67
SH3YL1-222	ENST00000479739	KRTAP4-6	Q9BYQ5	205 aa		4.6	□□□□□ -1.67
SH3YL1-222	ENST00000479739	CRIPT	Q9P021	101 aa		4.59	□□□□□ -1.67
SH3YL1-222	ENST00000479739	KRTAP13-4	Q3LI77	160 aa		4.58	□□□□□ -1.68
SH3YL1-222	ENST00000479739		A0A0D9SG42	100 aa		4.56	□□□□□ -1.68
SH3YL1-222	ENST00000479739	KRTAP4-1	Q9BYQ7	146 aa		4.56	□□□□□ -1.68
SH3YL1-222	ENST00000479739	LCE2C	Q5TA81	110 aa		4.56	□□□□□ -1.68
SH3YL1-222	ENST00000479739		M0QZ58	72 aa		4.49	□□□□□ -1.69
SH3YL1-222	ENST00000479739	KRTAP12-2	P59991	146 aa		4.47	□□□□□ -1.69
SH3YL1-222	ENST00000479739	KRTAP12-1	P59990	96 aa		4.46	□□□□□ -1.7
SH3YL1-222	ENST00000479739	KRTAP19-2	Q3LHN2	52 aa		4.46	□□□□□ -1.7
SH3YL1-222	ENST00000479739	C10orf95	Q9H7T3	257 aa		4.44	□□□□□ -1.7
SH3YL1-222	ENST00000479739	KRTAP9-2	Q9BYQ4	174 aa		4.42	□□□□□ -1.7
SH3YL1-222	ENST00000479739	LOR	P23490	312 aa	Predicted RBP	4.4	□□□□□ -1.7
SH3YL1-222	ENST00000479739	FLG	P20930	4061 aa	Predicted RBP	4.4	□□□□□ -1.71
SH3YL1-222	ENST00000479739	KRTAP9-6	A0A140TA67	174 aa		4.39	□□□□□ -1.71
SH3YL1-222	ENST00000479739	MT1H	P80294	61 aa		4.36	□□□□□ -1.71
SH3YL1-222	ENST00000479739	CAMK2N1	Q7Z7J9	78 aa		4.32	□□□□□ -1.72
SH3YL1-222	ENST00000479739		R4GN34	69 aa		4.3	□□□□□ -1.72
SH3YL1-222	ENST00000479739		M0R2T5	61 aa		4.23	□□□□□ -1.73
SH3YL1-222	ENST00000479739	PLAC4	Q8WY50	150 aa		4.21	□□□□□ -1.74
SH3YL1-222	ENST00000479739	PP632	Q6XCG6	107 aa		4.2	□□□□□ -1.74
SH3YL1-222	ENST00000479739	FSIP2	Q5CZC0	6907 aa		4.17	□□□□□ -1.74
SH3YL1-222	ENST00000479739	KRTAP9-8	Q9BYQ0	159 aa		4.15	□□□□□ -1.74
SH3YL1-222	ENST00000479739	PRO2289	Q9P1D8	64 aa		4.11	□□□□□ -1.75
SH3YL1-222	ENST00000479739	CRCT1	Q9UGL9	99 aa		4.11	□□□□□ -1.75
SH3YL1-222	ENST00000479739	MT2A	P02795	61 aa		4.09	□□□□□ -1.76
SH3YL1-222	ENST00000479739	KRTAP23-1	A1A580	65 aa		4.06	□□□□□ -1.76
SH3YL1-222	ENST00000479739	MT1F	P04733	61 aa		4.06	□□□□□ -1.76
SH3YL1-222	ENST00000479739	USH2A	O75445	5202 aa		4.04	□□□□□ -1.76
SH3YL1-222	ENST00000479739	KRTAP9-3	Q9BYQ3	159 aa		4.02	□□□□□ -1.77
SH3YL1-222	ENST00000479739	SSPO	A2VEC9	5147 aa		4	□□□□□ -1.77
SH3YL1-222	ENST00000479739	KRTAP10-10	P60014	251 aa		4	□□□□□ -1.77
SH3YL1-222	ENST00000479739	TNP1	P09430	55 aa		3.99	□□□□□ -1.77
SH3YL1-222	ENST00000479739	KRTAP4-8	Q9BYQ9	185 aa		3.97	□□□□□ -1.77
SH3YL1-222	ENST00000479739	INE1	O15225	51 aa		3.96	□□□□□ -1.78
SH3YL1-222	ENST00000479739	SPRR5	A0A1B0GTR4	108 aa		3.93	□□□□□ -1.78
SH3YL1-222	ENST00000479739	KRTAP9-7	A8MTY7	169 aa		3.91	□□□□□ -1.78
SH3YL1-222	ENST00000479739	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	3.91	□□□□□ -1.78
SH3YL1-222	ENST00000479739	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.88	□□□□□ -1.79
SH3YL1-222	ENST00000479739	KRTAP19-1	Q8IUB9	90 aa		3.87	□□□□□ -1.79
SH3YL1-222	ENST00000479739	KRTAP19-6	Q3LI70	58 aa		3.83	□□□□□ -1.8
SH3YL1-222	ENST00000479739	SPRR2G	Q9BYE4	73 aa		3.82	□□□□□ -1.8
SH3YL1-222	ENST00000479739	KRTAP4-8	A0A0G2JLE6	195 aa		3.78	□□□□□ -1.8
SH3YL1-222	ENST00000479739	KRTAP19-8	Q3LI54	63 aa		3.76	□□□□□ -1.81
SH3YL1-222	ENST00000479739	KRTAP4-12	Q9BQ66	201 aa		3.76	□□□□□ -1.81
SH3YL1-222	ENST00000479739	MT1B	P07438	61 aa		3.75	□□□□□ -1.81
SH3YL1-222	ENST00000479739	LCE3B	Q5TA77	95 aa		3.74	□□□□□ -1.81
SH3YL1-222	ENST00000479739	KRTAP9-9	Q9BYP9	154 aa		3.71	□□□□□ -1.82
SH3YL1-222	ENST00000479739	KRTAP9-4	Q9BYQ2	154 aa		3.71	□□□□□ -1.82
SH3YL1-222	ENST00000479739	KRTAP4-7	Q9BYR0	210 aa		3.7	□□□□□ -1.82
SH3YL1-222	ENST00000479739	MACF1	Q9UPN3	7388 aa	Known RBP	3.7	□□□□□ -1.82
SH3YL1-222	ENST00000479739	LCE3A	Q5TA76	89 aa		3.68	□□□□□ -1.82
SH3YL1-222	ENST00000479739	SYNE2	Q8WXH0	6885 aa	Known RBP	3.68	□□□□□ -1.82
SH3YL1-222	ENST00000479739	KRTAP8-1	Q8IUC2	63 aa		3.66	□□□□□ -1.82

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