RNA–Protein interactions for RNA: ENST00000478993.5

DDX3X-204, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 1 (best)

Gene DDX3X, Length 3,397 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-204ENST00000478993 LRP1Q07954 4544 aaKnown RBP5.11□□□□□ -1.59
DDX3X-204ENST00000478993 LINC00304Q8N9R0 145 aa5.11□□□□□ -1.59
DDX3X-204ENST00000478993 SEC61BP60468 96 aaKnown RBP5.1□□□□□ -1.59
DDX3X-204ENST00000478993 FAT1Q14517 4588 aa5.1□□□□□ -1.59
DDX3X-204ENST00000478993 KRTAP10-4P60372 401 aaPredicted RBP5.1□□□□□ -1.59
DDX3X-204ENST00000478993 TYMSOSQ8TAI1 123 aa5.1□□□□□ -1.59
DDX3X-204ENST00000478993 NDUFAF8A1L188 74 aa5.09□□□□□ -1.59
DDX3X-204ENST00000478993 SPINT4Q6UDR6 99 aa5.05□□□□□ -1.6
DDX3X-204ENST00000478993 H1FX-AS1Q4G0G2 97 aa5.05□□□□□ -1.6
DDX3X-204ENST00000478993 Q8N1X5 172 aa5.02□□□□□ -1.61
DDX3X-204ENST00000478993 A0A1B0GU33 70 aa5□□□□□ -1.61
DDX3X-204ENST00000478993 KRTAP10-6P60371 365 aaPredicted RBP4.99□□□□□ -1.61
DDX3X-204ENST00000478993 COX6B2Q6YFQ2 88 aa4.95□□□□□ -1.62
DDX3X-204ENST00000478993 MYCBP2O75592 4640 aa4.94□□□□□ -1.62
DDX3X-204ENST00000478993 SMR3BP02814 79 aaPredicted RBP4.94□□□□□ -1.62
DDX3X-204ENST00000478993 A0A1B0GVY2 172 aa4.91□□□□□ -1.62
DDX3X-204ENST00000478993 RYR2Q92736 4967 aa4.91□□□□□ -1.62
DDX3X-204ENST00000478993 KRTAP13-4Q3LI77 160 aa4.9□□□□□ -1.62
DDX3X-204ENST00000478993 KRTAP15-1Q3LI76 137 aa4.9□□□□□ -1.63
DDX3X-204ENST00000478993 K7ERS5 55 aa4.89□□□□□ -1.63
DDX3X-204ENST00000478993 C9orf92A6NGG3 77 aa4.88□□□□□ -1.63
DDX3X-204ENST00000478993 LUZP6Q538Z0 58 aa4.87□□□□□ -1.63
DDX3X-204ENST00000478993 TPRXLQ17RH7 258 aa4.85□□□□□ -1.63
DDX3X-204ENST00000478993 C10orf95Q9H7T3 257 aa4.82□□□□□ -1.64
DDX3X-204ENST00000478993 KRTAP19-4Q3LI73 84 aa4.8□□□□□ -1.64
DDX3X-204ENST00000478993 RPL37P61927 97 aaKnown RBP4.8□□□□□ -1.64
DDX3X-204ENST00000478993 KRTAP10-8P60410 259 aa4.79□□□□□ -1.64
DDX3X-204ENST00000478993 LPAP08519 4548 aa4.78□□□□□ -1.64
DDX3X-204ENST00000478993 XP32Q5T750 250 aa4.74□□□□□ -1.65
DDX3X-204ENST00000478993 KMT2CQ8NEZ4 4911 aaKnown RBP4.73□□□□□ -1.65
DDX3X-204ENST00000478993 KRTAP12-2P59991 146 aa4.71□□□□□ -1.65
DDX3X-204ENST00000478993 KRTAP12-1P59990 96 aa4.71□□□□□ -1.66
DDX3X-204ENST00000478993 RYR1P21817 5038 aa4.71□□□□□ -1.66
DDX3X-204ENST00000478993 A0A0D9SG42 100 aa4.71□□□□□ -1.66
DDX3X-204ENST00000478993 S4R3F8 94 aa4.68□□□□□ -1.66
DDX3X-204ENST00000478993 MUC17Q685J3 4493 aa4.68□□□□□ -1.66
DDX3X-204ENST00000478993 KRTAP21-3Q3LHN1 58 aa4.66□□□□□ -1.66
DDX3X-204ENST00000478993 KRTAP17-1Q9BYP8 105 aa4.64□□□□□ -1.67
DDX3X-204ENST00000478993 LRP2P98164 4655 aa4.6□□□□□ -1.67
DDX3X-204ENST00000478993 MT1HL1P0DM35 61 aa4.59□□□□□ -1.67
DDX3X-204ENST00000478993 RYR3Q15413 4870 aa4.59□□□□□ -1.67
DDX3X-204ENST00000478993 M0QZ58 72 aa4.59□□□□□ -1.68
DDX3X-204ENST00000478993 FLGP20930 4061 aaPredicted RBP4.5□□□□□ -1.69
DDX3X-204ENST00000478993 KRTAP19-2Q3LHN2 52 aa4.5□□□□□ -1.69
DDX3X-204ENST00000478993 LCE4AQ5TA78 99 aa4.5□□□□□ -1.69
DDX3X-204ENST00000478993 ABCA13Q86UQ4 5058 aa4.5□□□□□ -1.69
DDX3X-204ENST00000478993 KRTAP9-6A0A140TA67 174 aa4.46□□□□□ -1.7
DDX3X-204ENST00000478993 KRTAP9-7A8MTY7 169 aa4.46□□□□□ -1.7
DDX3X-204ENST00000478993 PLAC4Q8WY50 150 aa4.45□□□□□ -1.7
DDX3X-204ENST00000478993 Q5VSD8 79 aa4.44□□□□□ -1.7
DDX3X-204ENST00000478993 KRTAP19-1Q8IUB9 90 aa4.42□□□□□ -1.7
DDX3X-204ENST00000478993 KRTAP9-4Q9BYQ2 154 aa4.39□□□□□ -1.71
DDX3X-204ENST00000478993 KIAA1109Q2LD37 5005 aa4.39□□□□□ -1.71
DDX3X-204ENST00000478993 HERC1Q15751 4861 aa4.38□□□□□ -1.71
DDX3X-204ENST00000478993 EPPK1P58107 5090 aaKnown RBP4.34□□□□□ -1.71
DDX3X-204ENST00000478993 KRTAP9-9Q9BYP9 154 aa4.32□□□□□ -1.72
DDX3X-204ENST00000478993 SPRR5A0A1B0GTR4 108 aa4.32□□□□□ -1.72
DDX3X-204ENST00000478993 KRTAP4-1Q9BYQ7 146 aa4.31□□□□□ -1.72
DDX3X-204ENST00000478993 PP632Q6XCG6 107 aa4.28□□□□□ -1.72
DDX3X-204ENST00000478993 CAMK2N1Q7Z7J9 78 aa4.28□□□□□ -1.72
DDX3X-204ENST00000478993 BIRC6Q9NR09 4857 aa4.26□□□□□ -1.73
DDX3X-204ENST00000478993 LOC100996750A0A140TA64 210 aa4.25□□□□□ -1.73
DDX3X-204ENST00000478993 KRTAP4-12Q9BQ66 201 aa4.25□□□□□ -1.73
DDX3X-204ENST00000478993 KRTAP4-6Q9BYQ5 205 aa4.25□□□□□ -1.73
DDX3X-204ENST00000478993 R4GN34 69 aa4.24□□□□□ -1.73
DDX3X-204ENST00000478993 MUC2Q02817 5179 aa4.19□□□□□ -1.74
DDX3X-204ENST00000478993 KRTAP9-3Q9BYQ3 159 aa4.19□□□□□ -1.74
DDX3X-204ENST00000478993 PCLOQ9Y6V0 5065 aa4.17□□□□□ -1.74
DDX3X-204ENST00000478993 KRTAP4-8Q9BYQ9 185 aa4.16□□□□□ -1.74
DDX3X-204ENST00000478993 PRO2289Q9P1D8 64 aa4.16□□□□□ -1.74
DDX3X-204ENST00000478993 LCE5AQ5TCM9 118 aa4.15□□□□□ -1.75
DDX3X-204ENST00000478993 KRTAP4-5Q9BYR2 181 aa4.13□□□□□ -1.75
DDX3X-204ENST00000478993 KRTAP9-2Q9BYQ4 174 aa4.13□□□□□ -1.75
DDX3X-204ENST00000478993 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.1□□□□□ -1.75
DDX3X-204ENST00000478993 LCE3BQ5TA77 95 aa4.08□□□□□ -1.76
DDX3X-204ENST00000478993 HERC2O95714 4834 aa4.07□□□□□ -1.76
DDX3X-204ENST00000478993 SPRR2GQ9BYE4 73 aa4.06□□□□□ -1.76
DDX3X-204ENST00000478993 HMCN2Q8NDA2 5059 aa4.01□□□□□ -1.77
DDX3X-204ENST00000478993 TNP1P09430 55 aa3.97□□□□□ -1.77
DDX3X-204ENST00000478993 FAT4Q6V0I7 4981 aa3.96□□□□□ -1.78
DDX3X-204ENST00000478993 INE1O15225 51 aa3.94□□□□□ -1.78
DDX3X-204ENST00000478993 UBR4Q5T4S7 5183 aa3.92□□□□□ -1.78
DDX3X-204ENST00000478993 RNF213Q63HN8 5207 aa3.91□□□□□ -1.78
DDX3X-204ENST00000478993 KRTAP8-1Q8IUC2 63 aa3.9□□□□□ -1.79
DDX3X-204ENST00000478993 KRTAP19-8Q3LI54 63 aa3.88□□□□□ -1.79
DDX3X-204ENST00000478993 M0R2T5 61 aa3.86□□□□□ -1.79
DDX3X-204ENST00000478993 LCE3AQ5TA76 89 aa3.84□□□□□ -1.79
DDX3X-204ENST00000478993 KRTAP9-8Q9BYQ0 159 aa3.82□□□□□ -1.8
DDX3X-204ENST00000478993 KRTAP10-5P60370 271 aa3.8□□□□□ -1.8
DDX3X-204ENST00000478993 MT1HP80294 61 aa3.79□□□□□ -1.8
DDX3X-204ENST00000478993 KRTAP10-12P60413 245 aa3.79□□□□□ -1.8
DDX3X-204ENST00000478993 MT1FP04733 61 aa3.78□□□□□ -1.8
DDX3X-204ENST00000478993 MT2AP02795 61 aa3.77□□□□□ -1.81
DDX3X-204ENST00000478993 MT1XP80297 61 aa3.77□□□□□ -1.81
DDX3X-204ENST00000478993 LCE1DQ5T752 114 aa3.77□□□□□ -1.81
DDX3X-204ENST00000478993 MT1BP07438 61 aa3.77□□□□□ -1.81
DDX3X-204ENST00000478993 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
DDX3X-204ENST00000478993 KRTAP4-8A0A0G2JLE6 195 aa3.69□□□□□ -1.82
DDX3X-204ENST00000478993 KRTAP10-10P60014 251 aa3.63□□□□□ -1.83
DDX3X-204ENST00000478993 KRTAP12-3P60328 96 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms