RNA–Protein interactions for RNA: ENST00000478541.1

CYTH3-206, Transcript of cytohesin 3, humanhuman

TSL 2

Gene CYTH3, Length 505 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-206ENST00000478541 ATOX1O00244 68 aa7.38□□□□□ -1.23
CYTH3-206ENST00000478541 CSAG1Q6PB30 78 aa7.38□□□□□ -1.23
CYTH3-206ENST00000478541 SCGB1A1P11684 91 aa7.35□□□□□ -1.23
CYTH3-206ENST00000478541 FAM236AA0A1B0GUQ0 79 aa7.32□□□□□ -1.24
CYTH3-206ENST00000478541 FAM236BA0A1B0GV22 79 aa7.32□□□□□ -1.24
CYTH3-206ENST00000478541 LINC00208Q96KT6 92 aa7.32□□□□□ -1.24
CYTH3-206ENST00000478541 MP68P56378 58 aa7.31□□□□□ -1.24
CYTH3-206ENST00000478541 KLKP1Q107X0 134 aa7.26□□□□□ -1.25
CYTH3-206ENST00000478541 H3BPC8 53 aa7.24□□□□□ -1.25
CYTH3-206ENST00000478541 SPRR2GQ9BYE4 73 aa7.24□□□□□ -1.25
CYTH3-206ENST00000478541 MACF1Q9UPN3 7388 aaKnown RBP7.24□□□□□ -1.25
CYTH3-206ENST00000478541 TRAV7A0A075B6U4 112 aa7.22□□□□□ -1.25
CYTH3-206ENST00000478541 SMIM20Q8N5G0 67 aa7.22□□□□□ -1.25
CYTH3-206ENST00000478541 KRTAP19-8Q3LI54 63 aa7.18□□□□□ -1.26
CYTH3-206ENST00000478541 MT1BP07438 61 aa7.17□□□□□ -1.26
CYTH3-206ENST00000478541 SYNE2Q8WXH0 6885 aaKnown RBP7.16□□□□□ -1.26
CYTH3-206ENST00000478541 A8MUN3 132 aa7.16□□□□□ -1.26
CYTH3-206ENST00000478541 Q5VV11 94 aa7.16□□□□□ -1.26
CYTH3-206ENST00000478541 CRIPTQ9P021 101 aa7.14□□□□□ -1.27
CYTH3-206ENST00000478541 NDUFC1O43677 76 aa7.13□□□□□ -1.27
CYTH3-206ENST00000478541 H0YAA0 97 aa7.11□□□□□ -1.27
CYTH3-206ENST00000478541 SERP2Q8N6R1 65 aa7.08□□□□□ -1.28
CYTH3-206ENST00000478541 A6NN06 94 aa7.07□□□□□ -1.28
CYTH3-206ENST00000478541 SNURFQ9Y675 71 aa7.07□□□□□ -1.28
CYTH3-206ENST00000478541 DMAC1Q96GE9 116 aa7.05□□□□□ -1.28
CYTH3-206ENST00000478541 KRTAP6-3Q3LI67 103 aa7.04□□□□□ -1.28
CYTH3-206ENST00000478541 C20orf197Q8N268 126 aa7.03□□□□□ -1.28
CYTH3-206ENST00000478541 KRTAP10-5P60370 271 aa7.01□□□□□ -1.29
CYTH3-206ENST00000478541 COX7CP15954 63 aa6.97□□□□□ -1.29
CYTH3-206ENST00000478541 ADM2Q7Z4H4 148 aa6.97□□□□□ -1.29
CYTH3-206ENST00000478541 ACYP2P14621 99 aa6.91□□□□□ -1.3
CYTH3-206ENST00000478541 SPANXA2-OT1Q8N9U9 137 aa6.9□□□□□ -1.3
CYTH3-206ENST00000478541 ANAPC13Q9BS18 74 aa6.88□□□□□ -1.31
CYTH3-206ENST00000478541 CYSTM1Q9H1C7 97 aa6.85□□□□□ -1.31
CYTH3-206ENST00000478541 P0C880 135 aa6.83□□□□□ -1.32
CYTH3-206ENST00000478541 R4GN34 69 aa6.82□□□□□ -1.32
CYTH3-206ENST00000478541 CHKB-CPT1BH3BT56 60 aa6.8□□□□□ -1.32
CYTH3-206ENST00000478541 H7BZZ5 65 aa6.8□□□□□ -1.32
CYTH3-206ENST00000478541 MUC12Q9UKN1 5478 aa6.79□□□□□ -1.32
CYTH3-206ENST00000478541 CCDC179H3BU77 68 aa6.76□□□□□ -1.33
CYTH3-206ENST00000478541 PLAC4Q8WY50 150 aa6.76□□□□□ -1.33
CYTH3-206ENST00000478541 PRO2289Q9P1D8 64 aa6.76□□□□□ -1.33
CYTH3-206ENST00000478541 M0QZ58 72 aa6.75□□□□□ -1.33
CYTH3-206ENST00000478541 KRTAP5-9P26371 169 aa6.75□□□□□ -1.33
CYTH3-206ENST00000478541 SPTSSBQ8NFR3 76 aa6.75□□□□□ -1.33
CYTH3-206ENST00000478541 MT1XP80297 61 aa6.73□□□□□ -1.33
CYTH3-206ENST00000478541 COA5Q86WW8 74 aa6.71□□□□□ -1.34
CYTH3-206ENST00000478541 NEBP20929 6669 aa6.7□□□□□ -1.34
CYTH3-206ENST00000478541 KMT2DO14686 5537 aa6.66□□□□□ -1.34
CYTH3-206ENST00000478541 LINC01554Q52M75 96 aa6.62□□□□□ -1.35
CYTH3-206ENST00000478541 MDN1Q9NU22 5596 aa6.61□□□□□ -1.35
CYTH3-206ENST00000478541 KRTAP12-2P59991 146 aa6.6□□□□□ -1.35
CYTH3-206ENST00000478541 ATP5EP56381 51 aaPredicted RBP6.54□□□□□ -1.36
CYTH3-206ENST00000478541 SPRR2FQ96RM1 72 aa6.5□□□□□ -1.37
CYTH3-206ENST00000478541 TMEM258P61165 79 aa6.49□□□□□ -1.37
CYTH3-206ENST00000478541 KRTAP8-1Q8IUC2 63 aa6.49□□□□□ -1.37
CYTH3-206ENST00000478541 KRTAP20-1Q3LI63 56 aa6.48□□□□□ -1.37
CYTH3-206ENST00000478541 SEC61GP60059 68 aa6.43□□□□□ -1.38
CYTH3-206ENST00000478541 KRTAP13-4Q3LI77 160 aa6.43□□□□□ -1.38
CYTH3-206ENST00000478541 SERP1Q9Y6X1 66 aa6.43□□□□□ -1.38
CYTH3-206ENST00000478541 KRTAP10-12P60413 245 aa6.42□□□□□ -1.38
CYTH3-206ENST00000478541 KRTAP4-8A0A0G2JLE6 195 aa6.41□□□□□ -1.38
CYTH3-206ENST00000478541 KRTAP10-7P60409 375 aaPredicted RBP6.41□□□□□ -1.38
CYTH3-206ENST00000478541 KRTAP4-8Q9BYQ9 185 aa6.41□□□□□ -1.38
CYTH3-206ENST00000478541 SPRR2EP22531 72 aa6.4□□□□□ -1.38
CYTH3-206ENST00000478541 SPRR2BP35325 72 aa6.4□□□□□ -1.38
CYTH3-206ENST00000478541 SPRR2AP35326 72 aa6.4□□□□□ -1.38
CYTH3-206ENST00000478541 A0A1B0GU69 56 aa6.34□□□□□ -1.39
CYTH3-206ENST00000478541 KRTAP2-3P0C7H8 128 aa6.34□□□□□ -1.39
CYTH3-206ENST00000478541 LCE1AQ5T7P2 110 aa6.34□□□□□ -1.39
CYTH3-206ENST00000478541 KRTAP2-4Q9BYR9 128 aa6.34□□□□□ -1.39
CYTH3-206ENST00000478541 A0A1B0GU33 70 aa6.31□□□□□ -1.4
CYTH3-206ENST00000478541 SPATA8Q6RVD6 105 aa6.29□□□□□ -1.4
CYTH3-206ENST00000478541 LINC01558Q9Y6Z2 57 aa6.26□□□□□ -1.41
CYTH3-206ENST00000478541 PCP4P48539 62 aa6.25□□□□□ -1.41
CYTH3-206ENST00000478541 CAMK2N1Q7Z7J9 78 aa6.25□□□□□ -1.41
CYTH3-206ENST00000478541 A0A0D9SG42 100 aa6.24□□□□□ -1.41
CYTH3-206ENST00000478541 PRR15LQ9BU68 103 aa6.23□□□□□ -1.41
CYTH3-206ENST00000478541 SPRR2DP22532 72 aa6.19□□□□□ -1.42
CYTH3-206ENST00000478541 KRTAP2-2Q9BYT5 123 aa6.14□□□□□ -1.43
CYTH3-206ENST00000478541 KRTAP2-1Q9BYU5 128 aa6.14□□□□□ -1.43
CYTH3-206ENST00000478541 SMIM26A0A096LP01 95 aa6.13□□□□□ -1.43
CYTH3-206ENST00000478541 A8MU10 97 aa6.13□□□□□ -1.43
CYTH3-206ENST00000478541 KRTAP12-1P59990 96 aa6.12□□□□□ -1.43
CYTH3-206ENST00000478541 SPINT4Q6UDR6 99 aa6.12□□□□□ -1.43
CYTH3-206ENST00000478541 SVIPQ8NHG7 77 aa6.08□□□□□ -1.44
CYTH3-206ENST00000478541 V9GYY9 64 aa6.05□□□□□ -1.44
CYTH3-206ENST00000478541 Q1T7F1 81 aa6.04□□□□□ -1.44
CYTH3-206ENST00000478541 UQCR11O14957 56 aa6.03□□□□□ -1.44
CYTH3-206ENST00000478541 LCE3BQ5TA77 95 aa6.03□□□□□ -1.44
CYTH3-206ENST00000478541 KRTAP19-7Q3SYF9 63 aa6.02□□□□□ -1.45
CYTH3-206ENST00000478541 PSPHP1O15172 72 aa6.01□□□□□ -1.45
CYTH3-206ENST00000478541 RPS28P62857 69 aaKnown RBP5.97□□□□□ -1.45
CYTH3-206ENST00000478541 MT1EP04732 61 aa5.96□□□□□ -1.46
CYTH3-206ENST00000478541 LOC100996750A0A140TA64 210 aa5.94□□□□□ -1.46
CYTH3-206ENST00000478541 MIR22HGQ0VDD5 57 aa5.94□□□□□ -1.46
CYTH3-206ENST00000478541 LCE5AQ5TCM9 118 aa5.94□□□□□ -1.46
CYTH3-206ENST00000478541 KRTAP4-6Q9BYQ5 205 aa5.94□□□□□ -1.46
CYTH3-206ENST00000478541 KRTAP19-3Q7Z4W3 81 aa5.91□□□□□ -1.46
CYTH3-206ENST00000478541 KRTAP19-5Q3LI72 72 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms