RNA–Protein interactions for RNA: ENST00000475445.1

GGA1-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 2,614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-218ENST00000475445 NDUFAF8A1L188 74 aa7.77□□□□□ -1.17
GGA1-218ENST00000475445 Q8N1X5 172 aa7.76□□□□□ -1.17
GGA1-218ENST00000475445 KRTAP17-1Q9BYP8 105 aa7.75□□□□□ -1.17
GGA1-218ENST00000475445 Q5VSD8 79 aa7.72□□□□□ -1.17
GGA1-218ENST00000475445 SPINT4Q6UDR6 99 aa7.71□□□□□ -1.17
GGA1-218ENST00000475445 H0YAA0 97 aa7.7□□□□□ -1.18
GGA1-218ENST00000475445 CRIPTQ9P021 101 aa7.67□□□□□ -1.18
GGA1-218ENST00000475445 KRTAP4-5Q9BYR2 181 aa7.65□□□□□ -1.18
GGA1-218ENST00000475445 FLG2Q5D862 2391 aaPredicted RBP7.65□□□□□ -1.18
GGA1-218ENST00000475445 KRTAP15-1Q3LI76 137 aa7.64□□□□□ -1.19
GGA1-218ENST00000475445 ABCA13Q86UQ4 5058 aa7.64□□□□□ -1.19
GGA1-218ENST00000475445 KRTAP10-8P60410 259 aa7.64□□□□□ -1.19
GGA1-218ENST00000475445 KRTAP3-1Q9BYR8 98 aa7.63□□□□□ -1.19
GGA1-218ENST00000475445 LRP1Q07954 4544 aaKnown RBP7.62□□□□□ -1.19
GGA1-218ENST00000475445 K7ERS5 55 aa7.59□□□□□ -1.19
GGA1-218ENST00000475445 PCLOQ9Y6V0 5065 aa7.59□□□□□ -1.19
GGA1-218ENST00000475445 COX6B2Q6YFQ2 88 aa7.57□□□□□ -1.2
GGA1-218ENST00000475445 A0A1B0GU33 70 aa7.54□□□□□ -1.2
GGA1-218ENST00000475445 MYCBP2O75592 4640 aa7.54□□□□□ -1.2
GGA1-218ENST00000475445 FAT3Q8TDW7 4589 aa7.53□□□□□ -1.2
GGA1-218ENST00000475445 LUZP6Q538Z0 58 aa7.53□□□□□ -1.2
GGA1-218ENST00000475445 TNXBP22105 4242 aa7.52□□□□□ -1.21
GGA1-218ENST00000475445 RPL37P61927 97 aaKnown RBP7.51□□□□□ -1.21
GGA1-218ENST00000475445 DMBT1Q9UGM3 2413 aaPredicted RBP7.5□□□□□ -1.21
GGA1-218ENST00000475445 H1FX-AS1Q4G0G2 97 aa7.48□□□□□ -1.21
GGA1-218ENST00000475445 XP32Q5T750 250 aa7.46□□□□□ -1.22
GGA1-218ENST00000475445 TPRXLQ17RH7 258 aa7.45□□□□□ -1.22
GGA1-218ENST00000475445 MT1HL1P0DM35 61 aa7.4□□□□□ -1.23
GGA1-218ENST00000475445 SEC61BP60468 96 aaKnown RBP7.33□□□□□ -1.24
GGA1-218ENST00000475445 KRTAP3-3Q9BYR6 98 aa7.32□□□□□ -1.24
GGA1-218ENST00000475445 S4R3F8 94 aa7.3□□□□□ -1.24
GGA1-218ENST00000475445 C10orf95Q9H7T3 257 aa7.27□□□□□ -1.25
GGA1-218ENST00000475445 HERC1Q15751 4861 aa7.24□□□□□ -1.25
GGA1-218ENST00000475445 J3QL48 77 aa7.24□□□□□ -1.25
GGA1-218ENST00000475445 KRTAP10-6P60371 365 aaPredicted RBP7.24□□□□□ -1.25
GGA1-218ENST00000475445 KRTAP3-2Q9BYR7 98 aa7.2□□□□□ -1.26
GGA1-218ENST00000475445 KRTAP13-4Q3LI77 160 aa7.11□□□□□ -1.27
GGA1-218ENST00000475445 LPAP08519 4548 aa7.09□□□□□ -1.28
GGA1-218ENST00000475445 HMCN2Q8NDA2 5059 aa7.08□□□□□ -1.28
GGA1-218ENST00000475445 LRP2P98164 4655 aa7.06□□□□□ -1.28
GGA1-218ENST00000475445 A0A0D9SG42 100 aa7.03□□□□□ -1.28
GGA1-218ENST00000475445 M0QZ58 72 aa6.95□□□□□ -1.3
GGA1-218ENST00000475445 KRTAP12-2P59991 146 aa6.88□□□□□ -1.31
GGA1-218ENST00000475445 KRTAP12-1P59990 96 aa6.87□□□□□ -1.31
GGA1-218ENST00000475445 PLAC4Q8WY50 150 aa6.87□□□□□ -1.31
GGA1-218ENST00000475445 CAMK2N1Q7Z7J9 78 aa6.83□□□□□ -1.32
GGA1-218ENST00000475445 UBR4Q5T4S7 5183 aa6.82□□□□□ -1.32
GGA1-218ENST00000475445 KRTAP4-1Q9BYQ7 146 aa6.8□□□□□ -1.32
GGA1-218ENST00000475445 MUC17Q685J3 4493 aa6.8□□□□□ -1.32
GGA1-218ENST00000475445 R4GN34 69 aa6.75□□□□□ -1.33
GGA1-218ENST00000475445 KRTAP19-2Q3LHN2 52 aa6.72□□□□□ -1.33
GGA1-218ENST00000475445 MUC2Q02817 5179 aa6.68□□□□□ -1.34
GGA1-218ENST00000475445 RNF213Q63HN8 5207 aa6.67□□□□□ -1.34
GGA1-218ENST00000475445 LORP23490 312 aaPredicted RBP6.63□□□□□ -1.35
GGA1-218ENST00000475445 PRO2289Q9P1D8 64 aa6.57□□□□□ -1.36
GGA1-218ENST00000475445 FLGP20930 4061 aaPredicted RBP6.47□□□□□ -1.37
GGA1-218ENST00000475445 FAT4Q6V0I7 4981 aa6.41□□□□□ -1.38
GGA1-218ENST00000475445 PP632Q6XCG6 107 aa6.4□□□□□ -1.39
GGA1-218ENST00000475445 LCE2CQ5TA81 110 aa6.35□□□□□ -1.39
GGA1-218ENST00000475445 LCE2DQ5TA82 110 aaPredicted RBP6.29□□□□□ -1.4
GGA1-218ENST00000475445 INE1O15225 51 aa6.28□□□□□ -1.4
GGA1-218ENST00000475445 LCE2AQ5TA79 106 aaPredicted RBP6.28□□□□□ -1.4
GGA1-218ENST00000475445 SPRR5A0A1B0GTR4 108 aa6.27□□□□□ -1.41
GGA1-218ENST00000475445 M0R2T5 61 aa6.23□□□□□ -1.41
GGA1-218ENST00000475445 MT1HP80294 61 aa6.23□□□□□ -1.41
GGA1-218ENST00000475445 SPRR2GQ9BYE4 73 aa6.21□□□□□ -1.41
GGA1-218ENST00000475445 TNP1P09430 55 aa6.17□□□□□ -1.42
GGA1-218ENST00000475445 KRTAP23-1A1A580 65 aa6.15□□□□□ -1.43
GGA1-218ENST00000475445 KRTAP19-1Q8IUB9 90 aa6.14□□□□□ -1.43
GGA1-218ENST00000475445 MT2AP02795 61 aa6.06□□□□□ -1.44
GGA1-218ENST00000475445 MT1FP04733 61 aa6.04□□□□□ -1.44
GGA1-218ENST00000475445 KRTAP10-10P60014 251 aa6.04□□□□□ -1.44
GGA1-218ENST00000475445 KRTAP9-8Q9BYQ0 159 aa6.03□□□□□ -1.44
GGA1-218ENST00000475445 KRTAP19-8Q3LI54 63 aa5.96□□□□□ -1.45
GGA1-218ENST00000475445 KRTAP9-2Q9BYQ4 174 aa5.93□□□□□ -1.46
GGA1-218ENST00000475445 MT1BP07438 61 aa5.85□□□□□ -1.47
GGA1-218ENST00000475445 LCE3AQ5TA76 89 aa5.81□□□□□ -1.48
GGA1-218ENST00000475445 KRTAP9-3Q9BYQ3 159 aa5.78□□□□□ -1.48
GGA1-218ENST00000475445 KRTAP10-5P60370 271 aa5.78□□□□□ -1.48
GGA1-218ENST00000475445 MT1XP80297 61 aa5.78□□□□□ -1.48
GGA1-218ENST00000475445 KRTAP8-1Q8IUC2 63 aa5.73□□□□□ -1.49
GGA1-218ENST00000475445 KRTAP9-6A0A140TA67 174 aa5.66□□□□□ -1.5
GGA1-218ENST00000475445 KRTAP10-12P60413 245 aa5.65□□□□□ -1.5
GGA1-218ENST00000475445 LCE2BO14633 110 aa5.63□□□□□ -1.51
GGA1-218ENST00000475445 CRCT1Q9UGL9 99 aa5.62□□□□□ -1.51
GGA1-218ENST00000475445 FSIP2Q5CZC0 6907 aa5.61□□□□□ -1.51
GGA1-218ENST00000475445 USH2AO75445 5202 aa5.59□□□□□ -1.51
GGA1-218ENST00000475445 KRTAP10-7P60409 375 aaPredicted RBP5.58□□□□□ -1.52
GGA1-218ENST00000475445 KRTAP12-3P60328 96 aa5.57□□□□□ -1.52
GGA1-218ENST00000475445 SSPOA2VEC9 5147 aa5.5□□□□□ -1.53
GGA1-218ENST00000475445 KRTAP19-6Q3LI70 58 aa5.35□□□□□ -1.55
GGA1-218ENST00000475445 KRTAP19-5Q3LI72 72 aa5.34□□□□□ -1.55
GGA1-218ENST00000475445 FCGBPQ9Y6R7 5405 aaPredicted RBP5.34□□□□□ -1.56
GGA1-218ENST00000475445 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.25□□□□□ -1.57
GGA1-218ENST00000475445 LCE3CQ5T5A8 94 aa5.24□□□□□ -1.57
GGA1-218ENST00000475445 KRTAP4-8A0A0G2JLE6 195 aa5.22□□□□□ -1.57
GGA1-218ENST00000475445 KRTAP4-8Q9BYQ9 185 aa5.22□□□□□ -1.57
GGA1-218ENST00000475445 KMT2DO14686 5537 aa5.18□□□□□ -1.58
GGA1-218ENST00000475445 KRTAP19-7Q3SYF9 63 aa5.15□□□□□ -1.59
GGA1-218ENST00000475445 KRTAP19-4Q3LI73 84 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms