RNA–Protein interactions for RNA: ENST00000474543.5

NELFCD-204, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 5

Gene NELFCD, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-204ENST00000474543 DMBT1Q9UGM3 2413 aaPredicted RBP7.83□□□□□ -1.16
NELFCD-204ENST00000474543 J3QL48 77 aa7.83□□□□□ -1.16
NELFCD-204ENST00000474543 C9orf92A6NGG3 77 aa7.8□□□□□ -1.16
NELFCD-204ENST00000474543 A8MUU9 505 aa7.8□□□□□ -1.16
NELFCD-204ENST00000474543 C20orf166-AS1Q96NR2 134 aa7.79□□□□□ -1.16
NELFCD-204ENST00000474543 KRTAP3-1Q9BYR8 98 aa7.76□□□□□ -1.17
NELFCD-204ENST00000474543 HERC1Q15751 4861 aa7.72□□□□□ -1.17
NELFCD-204ENST00000474543 MT1HL1P0DM35 61 aa7.72□□□□□ -1.17
NELFCD-204ENST00000474543 TNXBP22105 4242 aa7.7□□□□□ -1.18
NELFCD-204ENST00000474543 KRTAP10-8P60410 259 aa7.69□□□□□ -1.18
NELFCD-204ENST00000474543 H0YAA0 97 aa7.69□□□□□ -1.18
NELFCD-204ENST00000474543 A0A1B0GU33 70 aa7.63□□□□□ -1.19
NELFCD-204ENST00000474543 LINC01554Q52M75 96 aa7.63□□□□□ -1.19
NELFCD-204ENST00000474543 CSAG1Q6PB30 78 aa7.62□□□□□ -1.19
NELFCD-204ENST00000474543 H1FX-AS1Q4G0G2 97 aa7.61□□□□□ -1.19
NELFCD-204ENST00000474543 COX6B2Q6YFQ2 88 aa7.59□□□□□ -1.19
NELFCD-204ENST00000474543 HMCN2Q8NDA2 5059 aa7.49□□□□□ -1.21
NELFCD-204ENST00000474543 KRTAP25-1Q3LHN0 102 aa7.42□□□□□ -1.22
NELFCD-204ENST00000474543 KRTAP3-3Q9BYR6 98 aa7.42□□□□□ -1.22
NELFCD-204ENST00000474543 RPL37P61927 97 aaKnown RBP7.39□□□□□ -1.23
NELFCD-204ENST00000474543 K7ERS5 55 aa7.39□□□□□ -1.23
NELFCD-204ENST00000474543 KRTAP10-6P60371 365 aaPredicted RBP7.39□□□□□ -1.23
NELFCD-204ENST00000474543 LRP2P98164 4655 aa7.36□□□□□ -1.23
NELFCD-204ENST00000474543 XP32Q5T750 250 aa7.35□□□□□ -1.23
NELFCD-204ENST00000474543 KRTAP3-2Q9BYR7 98 aa7.33□□□□□ -1.24
NELFCD-204ENST00000474543 LPAP08519 4548 aa7.33□□□□□ -1.24
NELFCD-204ENST00000474543 KRTAP13-4Q3LI77 160 aa7.32□□□□□ -1.24
NELFCD-204ENST00000474543 S4R3F8 94 aa7.3□□□□□ -1.24
NELFCD-204ENST00000474543 CRIPTQ9P021 101 aa7.28□□□□□ -1.24
NELFCD-204ENST00000474543 ROMO1P60602 79 aa7.26□□□□□ -1.25
NELFCD-204ENST00000474543 A0A0D9SG42 100 aa7.25□□□□□ -1.25
NELFCD-204ENST00000474543 UBR4Q5T4S7 5183 aa7.24□□□□□ -1.25
NELFCD-204ENST00000474543 TPRXLQ17RH7 258 aa7.23□□□□□ -1.25
NELFCD-204ENST00000474543 P0C880 135 aa7.22□□□□□ -1.25
NELFCD-204ENST00000474543 H3BS24 57 aa7.18□□□□□ -1.26
NELFCD-204ENST00000474543 KRTAP12-2P59991 146 aa7.09□□□□□ -1.27
NELFCD-204ENST00000474543 RNF213Q63HN8 5207 aa7.04□□□□□ -1.28
NELFCD-204ENST00000474543 KRTAP12-1P59990 96 aa7.03□□□□□ -1.28
NELFCD-204ENST00000474543 MUC17Q685J3 4493 aa7.03□□□□□ -1.28
NELFCD-204ENST00000474543 SEC61BP60468 96 aaKnown RBP7.02□□□□□ -1.29
NELFCD-204ENST00000474543 C10orf95Q9H7T3 257 aa7.02□□□□□ -1.29
NELFCD-204ENST00000474543 SPINT4Q6UDR6 99 aa7□□□□□ -1.29
NELFCD-204ENST00000474543 M0QZ58 72 aa6.98□□□□□ -1.29
NELFCD-204ENST00000474543 MUC2Q02817 5179 aa6.96□□□□□ -1.29
NELFCD-204ENST00000474543 KRTAP4-1Q9BYQ7 146 aa6.88□□□□□ -1.31
NELFCD-204ENST00000474543 FAT4Q6V0I7 4981 aa6.8□□□□□ -1.32
NELFCD-204ENST00000474543 KRTAP15-1Q3LI76 137 aa6.79□□□□□ -1.32
NELFCD-204ENST00000474543 R4GN34 69 aa6.78□□□□□ -1.32
NELFCD-204ENST00000474543 LORP23490 312 aaPredicted RBP6.72□□□□□ -1.33
NELFCD-204ENST00000474543 KRTAP19-2Q3LHN2 52 aa6.65□□□□□ -1.35
NELFCD-204ENST00000474543 LCE2CQ5TA81 110 aa6.63□□□□□ -1.35
NELFCD-204ENST00000474543 NDUFAF8A1L188 74 aa6.62□□□□□ -1.35
NELFCD-204ENST00000474543 LCE2AQ5TA79 106 aaPredicted RBP6.61□□□□□ -1.35
NELFCD-204ENST00000474543 A0A0A0MQY5 61 aa6.58□□□□□ -1.36
NELFCD-204ENST00000474543 MT1HP80294 61 aa6.55□□□□□ -1.36
NELFCD-204ENST00000474543 FLGP20930 4061 aaPredicted RBP6.51□□□□□ -1.37
NELFCD-204ENST00000474543 M0R2T5 61 aa6.5□□□□□ -1.37
NELFCD-204ENST00000474543 PLAC4Q8WY50 150 aa6.45□□□□□ -1.38
NELFCD-204ENST00000474543 CAMK2N1Q7Z7J9 78 aa6.44□□□□□ -1.38
NELFCD-204ENST00000474543 PP632Q6XCG6 107 aa6.38□□□□□ -1.39
NELFCD-204ENST00000474543 KRTAP9-8Q9BYQ0 159 aa6.23□□□□□ -1.41
NELFCD-204ENST00000474543 KRTAP9-2Q9BYQ4 174 aa6.23□□□□□ -1.41
NELFCD-204ENST00000474543 TNP1P09430 55 aa6.22□□□□□ -1.41
NELFCD-204ENST00000474543 LCE2DQ5TA82 110 aaPredicted RBP6.18□□□□□ -1.42
NELFCD-204ENST00000474543 MT2AP02795 61 aa6.18□□□□□ -1.42
NELFCD-204ENST00000474543 KRTAP23-1A1A580 65 aa6.17□□□□□ -1.42
NELFCD-204ENST00000474543 LUZP6Q538Z0 58 aa6.15□□□□□ -1.43
NELFCD-204ENST00000474543 KRTAP10-10P60014 251 aa6.14□□□□□ -1.43
NELFCD-204ENST00000474543 MT1FP04733 61 aa6.13□□□□□ -1.43
NELFCD-204ENST00000474543 SPRR2GQ9BYE4 73 aa6.11□□□□□ -1.43
NELFCD-204ENST00000474543 KRTAP19-1Q8IUB9 90 aa6.08□□□□□ -1.44
NELFCD-204ENST00000474543 KRTAP9-3Q9BYQ3 159 aa6.03□□□□□ -1.44
NELFCD-204ENST00000474543 FSIP2Q5CZC0 6907 aa6.02□□□□□ -1.45
NELFCD-204ENST00000474543 SPRR5A0A1B0GTR4 108 aa6.01□□□□□ -1.45
NELFCD-204ENST00000474543 LCE2BO14633 110 aa5.94□□□□□ -1.46
NELFCD-204ENST00000474543 CRCT1Q9UGL9 99 aa5.94□□□□□ -1.46
NELFCD-204ENST00000474543 KRTAP9-6A0A140TA67 174 aa5.93□□□□□ -1.46
NELFCD-204ENST00000474543 USH2AO75445 5202 aa5.91□□□□□ -1.46
NELFCD-204ENST00000474543 LCE3AQ5TA76 89 aa5.9□□□□□ -1.47
NELFCD-204ENST00000474543 SSPOA2VEC9 5147 aa5.83□□□□□ -1.48
NELFCD-204ENST00000474543 KRTAP19-8Q3LI54 63 aa5.82□□□□□ -1.48
NELFCD-204ENST00000474543 KRTAP8-1Q8IUC2 63 aa5.75□□□□□ -1.49
NELFCD-204ENST00000474543 MT1BP07438 61 aa5.75□□□□□ -1.49
NELFCD-204ENST00000474543 KRTAP10-5P60370 271 aa5.74□□□□□ -1.49
NELFCD-204ENST00000474543 MT1XP80297 61 aa5.72□□□□□ -1.49
NELFCD-204ENST00000474543 KRTAP19-6Q3LI70 58 aa5.69□□□□□ -1.5
NELFCD-204ENST00000474543 FCGBPQ9Y6R7 5405 aaPredicted RBP5.63□□□□□ -1.51
NELFCD-204ENST00000474543 KRTAP10-12P60413 245 aa5.62□□□□□ -1.51
NELFCD-204ENST00000474543 KRTAP12-3P60328 96 aa5.6□□□□□ -1.51
NELFCD-204ENST00000474543 KRTAP10-7P60409 375 aaPredicted RBP5.57□□□□□ -1.52
NELFCD-204ENST00000474543 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.51□□□□□ -1.53
NELFCD-204ENST00000474543 PRO2289Q9P1D8 64 aa5.47□□□□□ -1.53
NELFCD-204ENST00000474543 MACF1Q9UPN3 7388 aaKnown RBP5.44□□□□□ -1.54
NELFCD-204ENST00000474543 KRTAP9-7A8MTY7 169 aa5.36□□□□□ -1.55
NELFCD-204ENST00000474543 KRTAP19-5Q3LI72 72 aa5.35□□□□□ -1.55
NELFCD-204ENST00000474543 SYNE2Q8WXH0 6885 aaKnown RBP5.34□□□□□ -1.55
NELFCD-204ENST00000474543 INE1O15225 51 aa5.33□□□□□ -1.56
NELFCD-204ENST00000474543 LCE3CQ5T5A8 94 aa5.3□□□□□ -1.56
NELFCD-204ENST00000474543 KRTAP6-3Q3LI67 103 aa5.23□□□□□ -1.57
NELFCD-204ENST00000474543 KMT2DO14686 5537 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms