RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 SMIM20Q8N5G0 67 aa5.01□□□□□ -1.61
CASC3-204ENST00000474190 SERP2Q8N6R1 65 aa4.99□□□□□ -1.61
CASC3-204ENST00000474190 M0R2T5 61 aa4.97□□□□□ -1.61
CASC3-204ENST00000474190 FCGBPQ9Y6R7 5405 aaPredicted RBP4.96□□□□□ -1.62
CASC3-204ENST00000474190 SYNE2Q8WXH0 6885 aaKnown RBP4.96□□□□□ -1.62
CASC3-204ENST00000474190 MT2AP02795 61 aa4.95□□□□□ -1.62
CASC3-204ENST00000474190 LCA10Q71F78 164 aa4.94□□□□□ -1.62
CASC3-204ENST00000474190 SNURFQ9Y675 71 aa4.94□□□□□ -1.62
CASC3-204ENST00000474190 MT1FP04733 61 aa4.93□□□□□ -1.62
CASC3-204ENST00000474190 CYSTM1Q9H1C7 97 aa4.93□□□□□ -1.62
CASC3-204ENST00000474190 C20orf197Q8N268 126 aa4.92□□□□□ -1.62
CASC3-204ENST00000474190 COX7CP15954 63 aa4.91□□□□□ -1.62
CASC3-204ENST00000474190 DMAC1Q96GE9 116 aa4.91□□□□□ -1.62
CASC3-204ENST00000474190 MACF1Q9UPN3 7388 aaKnown RBP4.9□□□□□ -1.63
CASC3-204ENST00000474190 S4R3F8 94 aa4.89□□□□□ -1.63
CASC3-204ENST00000474190 A8MUN3 132 aa4.88□□□□□ -1.63
CASC3-204ENST00000474190 KRTAP9-3Q9BYQ3 159 aa4.86□□□□□ -1.63
CASC3-204ENST00000474190 ANAPC13Q9BS18 74 aa4.84□□□□□ -1.63
CASC3-204ENST00000474190 CCDC179H3BU77 68 aa4.83□□□□□ -1.64
CASC3-204ENST00000474190 H7BZZ5 65 aa4.83□□□□□ -1.64
CASC3-204ENST00000474190 SPANXA2-OT1Q8N9U9 137 aa4.83□□□□□ -1.64
CASC3-204ENST00000474190 CSAG1Q6PB30 78 aa4.81□□□□□ -1.64
CASC3-204ENST00000474190 KRTAP10-10P60014 251 aa4.79□□□□□ -1.64
CASC3-204ENST00000474190 NDUFC1O43677 76 aa4.76□□□□□ -1.65
CASC3-204ENST00000474190 KRTAP19-1Q8IUB9 90 aa4.76□□□□□ -1.65
CASC3-204ENST00000474190 ACYP2P14621 99 aa4.75□□□□□ -1.65
CASC3-204ENST00000474190 H0YAA0 97 aa4.74□□□□□ -1.65
CASC3-204ENST00000474190 SVIPQ8NHG7 77 aa4.72□□□□□ -1.65
CASC3-204ENST00000474190 NEBP20929 6669 aa4.7□□□□□ -1.66
CASC3-204ENST00000474190 COA5Q86WW8 74 aa4.68□□□□□ -1.66
CASC3-204ENST00000474190 P0C880 135 aa4.67□□□□□ -1.66
CASC3-204ENST00000474190 SPRR2GQ9BYE4 73 aa4.67□□□□□ -1.66
CASC3-204ENST00000474190 ADM2Q7Z4H4 148 aa4.66□□□□□ -1.66
CASC3-204ENST00000474190 KRTAP19-8Q3LI54 63 aa4.63□□□□□ -1.67
CASC3-204ENST00000474190 MT1BP07438 61 aa4.62□□□□□ -1.67
CASC3-204ENST00000474190 CHKB-CPT1BH3BT56 60 aa4.61□□□□□ -1.67
CASC3-204ENST00000474190 KRTAP6-3Q3LI67 103 aa4.6□□□□□ -1.67
CASC3-204ENST00000474190 TMEM258P61165 79 aa4.58□□□□□ -1.68
CASC3-204ENST00000474190 CRIPTQ9P021 101 aa4.58□□□□□ -1.68
CASC3-204ENST00000474190 MUC12Q9UKN1 5478 aa4.56□□□□□ -1.68
CASC3-204ENST00000474190 ATP5EP56381 51 aaPredicted RBP4.56□□□□□ -1.68
CASC3-204ENST00000474190 SPTSSBQ8NFR3 76 aa4.56□□□□□ -1.68
CASC3-204ENST00000474190 PCP4P48539 62 aa4.53□□□□□ -1.68
CASC3-204ENST00000474190 KRTAP19-6Q3LI70 58 aa4.53□□□□□ -1.68
CASC3-204ENST00000474190 KRTAP13-4Q3LI77 160 aa4.52□□□□□ -1.69
CASC3-204ENST00000474190 KRTAP20-1Q3LI63 56 aa4.5□□□□□ -1.69
CASC3-204ENST00000474190 Q5VV11 94 aa4.48□□□□□ -1.69
CASC3-204ENST00000474190 M0QZ58 72 aa4.47□□□□□ -1.69
CASC3-204ENST00000474190 R4GN34 69 aa4.46□□□□□ -1.7
CASC3-204ENST00000474190 LOC100996750A0A140TA64 210 aa4.45□□□□□ -1.7
CASC3-204ENST00000474190 KRTAP4-6Q9BYQ5 205 aa4.45□□□□□ -1.7
CASC3-204ENST00000474190 SERP1Q9Y6X1 66 aa4.44□□□□□ -1.7
CASC3-204ENST00000474190 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
CASC3-204ENST00000474190 LINC01558Q9Y6Z2 57 aa4.41□□□□□ -1.7
CASC3-204ENST00000474190 MDN1Q9NU22 5596 aa4.4□□□□□ -1.71
CASC3-204ENST00000474190 KRTAP23-1A1A580 65 aa4.4□□□□□ -1.71
CASC3-204ENST00000474190 KRTAP10-5P60370 271 aa4.4□□□□□ -1.71
CASC3-204ENST00000474190 MT1XP80297 61 aa4.39□□□□□ -1.71
CASC3-204ENST00000474190 A0A1B0GU33 70 aa4.36□□□□□ -1.71
CASC3-204ENST00000474190 A0A1B0GU69 56 aa4.36□□□□□ -1.71
CASC3-204ENST00000474190 LINC01554Q52M75 96 aa4.36□□□□□ -1.71
CASC3-204ENST00000474190 SPATA8Q6RVD6 105 aa4.36□□□□□ -1.71
CASC3-204ENST00000474190 A6NN06 94 aa4.35□□□□□ -1.71
CASC3-204ENST00000474190 SEC61GP60059 68 aa4.34□□□□□ -1.71
CASC3-204ENST00000474190 KMT2DO14686 5537 aa4.33□□□□□ -1.72
CASC3-204ENST00000474190 RPS28P62857 69 aaKnown RBP4.32□□□□□ -1.72
CASC3-204ENST00000474190 Q1T7F1 81 aa4.3□□□□□ -1.72
CASC3-204ENST00000474190 PLAC4Q8WY50 150 aa4.29□□□□□ -1.72
CASC3-204ENST00000474190 A8MU10 97 aa4.28□□□□□ -1.72
CASC3-204ENST00000474190 KRTAP12-1P59990 96 aa4.28□□□□□ -1.72
CASC3-204ENST00000474190 A0A0D9SG42 100 aa4.27□□□□□ -1.73
CASC3-204ENST00000474190 SMIM26A0A096LP01 95 aa4.26□□□□□ -1.73
CASC3-204ENST00000474190 KRTAP12-2P59991 146 aa4.25□□□□□ -1.73
CASC3-204ENST00000474190 PRR15LQ9BU68 103 aa4.25□□□□□ -1.73
CASC3-204ENST00000474190 KRTAP2-3P0C7H8 128 aa4.23□□□□□ -1.73
CASC3-204ENST00000474190 KRTAP2-4Q9BYR9 128 aa4.23□□□□□ -1.73
CASC3-204ENST00000474190 PSPHP1O15172 72 aa4.22□□□□□ -1.73
CASC3-204ENST00000474190 KRTAP5-9P26371 169 aa4.22□□□□□ -1.73
CASC3-204ENST00000474190 KRTAP4-12Q9BQ66 201 aa4.21□□□□□ -1.74
CASC3-204ENST00000474190 KRTAP4-8Q9BYQ9 185 aa4.21□□□□□ -1.74
CASC3-204ENST00000474190 V9GYY9 64 aa4.2□□□□□ -1.74
CASC3-204ENST00000474190 KRTAP10-7P60409 375 aaPredicted RBP4.19□□□□□ -1.74
CASC3-204ENST00000474190 PRO2289Q9P1D8 64 aa4.19□□□□□ -1.74
CASC3-204ENST00000474190 GPR98Q8WXG9 6306 aa4.19□□□□□ -1.74
CASC3-204ENST00000474190 UQCR11O14957 56 aa4.17□□□□□ -1.74
CASC3-204ENST00000474190 SPINT4Q6UDR6 99 aa4.16□□□□□ -1.74
CASC3-204ENST00000474190 KRTAP10-12P60413 245 aa4.15□□□□□ -1.75
CASC3-204ENST00000474190 MIR22HGQ0VDD5 57 aa4.12□□□□□ -1.75
CASC3-204ENST00000474190 KRTAP4-8A0A0G2JLE6 195 aa4.11□□□□□ -1.75
CASC3-204ENST00000474190 CAMK2N1Q7Z7J9 78 aa4.11□□□□□ -1.75
CASC3-204ENST00000474190 C10orf95Q9H7T3 257 aa4.09□□□□□ -1.75
CASC3-204ENST00000474190 KRTAP2-2Q9BYT5 123 aa4.06□□□□□ -1.76
CASC3-204ENST00000474190 KRTAP2-1Q9BYU5 128 aa4.06□□□□□ -1.76
CASC3-204ENST00000474190 SPRR2EP22531 72 aa4.05□□□□□ -1.76
CASC3-204ENST00000474190 SPRR2BP35325 72 aa4.05□□□□□ -1.76
CASC3-204ENST00000474190 SPRR2AP35326 72 aa4.05□□□□□ -1.76
CASC3-204ENST00000474190 LCE4AQ5TA78 99 aa4.05□□□□□ -1.76
CASC3-204ENST00000474190 A6NED7 52 aa4.03□□□□□ -1.76
CASC3-204ENST00000474190 LCE3BQ5TA77 95 aa4□□□□□ -1.77
CASC3-204ENST00000474190 SPRR2FQ96RM1 72 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms