RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 KRTAP4-12Q9BQ66 201 aa5.98□□□□□ -1.45
C9orf3-214ENST00000473778 KRTAP19-1Q8IUB9 90 aa5.96□□□□□ -1.46
C9orf3-214ENST00000473778 C9orf92A6NGG3 77 aa5.95□□□□□ -1.46
C9orf3-214ENST00000473778 KRTAP10-4P60372 401 aaPredicted RBP5.95□□□□□ -1.46
C9orf3-214ENST00000473778 RYR2Q92736 4967 aa5.95□□□□□ -1.46
C9orf3-214ENST00000473778 KRTAP25-1Q3LHN0 102 aa5.94□□□□□ -1.46
C9orf3-214ENST00000473778 RPS29P62273 56 aaKnown RBP5.94□□□□□ -1.46
C9orf3-214ENST00000473778 EPPK1P58107 5090 aaKnown RBP5.92□□□□□ -1.46
C9orf3-214ENST00000473778 KRTAP3-1Q9BYR8 98 aa5.91□□□□□ -1.46
C9orf3-214ENST00000473778 A0A1B0GVY2 172 aa5.9□□□□□ -1.46
C9orf3-214ENST00000473778 C20orf166-AS1Q96NR2 134 aa5.89□□□□□ -1.47
C9orf3-214ENST00000473778 A8MUU9 505 aa5.89□□□□□ -1.47
C9orf3-214ENST00000473778 LRP1Q07954 4544 aaKnown RBP5.89□□□□□ -1.47
C9orf3-214ENST00000473778 BIRC6Q9NR09 4857 aa5.88□□□□□ -1.47
C9orf3-214ENST00000473778 LCE3BQ5TA77 95 aa5.87□□□□□ -1.47
C9orf3-214ENST00000473778 FLG2Q5D862 2391 aaPredicted RBP5.87□□□□□ -1.47
C9orf3-214ENST00000473778 FAT3Q8TDW7 4589 aa5.82□□□□□ -1.48
C9orf3-214ENST00000473778 HSPG2P98160 4391 aa5.82□□□□□ -1.48
C9orf3-214ENST00000473778 TNXBP22105 4242 aa5.82□□□□□ -1.48
C9orf3-214ENST00000473778 P0C880 135 aa5.81□□□□□ -1.48
C9orf3-214ENST00000473778 H0YAA0 97 aa5.8□□□□□ -1.48
C9orf3-214ENST00000473778 MYCBP2O75592 4640 aa5.78□□□□□ -1.48
C9orf3-214ENST00000473778 KRTAP9-9Q9BYP9 154 aa5.76□□□□□ -1.49
C9orf3-214ENST00000473778 KRTAP9-4Q9BYQ2 154 aa5.76□□□□□ -1.49
C9orf3-214ENST00000473778 CRIPTQ9P021 101 aa5.73□□□□□ -1.49
C9orf3-214ENST00000473778 KRTAP17-1Q9BYP8 105 aa5.72□□□□□ -1.49
C9orf3-214ENST00000473778 A0A1B0GU33 70 aa5.71□□□□□ -1.5
C9orf3-214ENST00000473778 COX6B2Q6YFQ2 88 aa5.71□□□□□ -1.5
C9orf3-214ENST00000473778 DMBT1Q9UGM3 2413 aaPredicted RBP5.7□□□□□ -1.5
C9orf3-214ENST00000473778 H1FX-AS1Q4G0G2 97 aa5.69□□□□□ -1.5
C9orf3-214ENST00000473778 LPAP08519 4548 aa5.66□□□□□ -1.5
C9orf3-214ENST00000473778 K7ERS5 55 aa5.66□□□□□ -1.5
C9orf3-214ENST00000473778 KRTAP10-8P60410 259 aa5.66□□□□□ -1.5
C9orf3-214ENST00000473778 SPINT4Q6UDR6 99 aa5.64□□□□□ -1.51
C9orf3-214ENST00000473778 HERC2O95714 4834 aa5.63□□□□□ -1.51
C9orf3-214ENST00000473778 LCE4AQ5TA78 99 aa5.62□□□□□ -1.51
C9orf3-214ENST00000473778 PCLOQ9Y6V0 5065 aa5.62□□□□□ -1.51
C9orf3-214ENST00000473778 Q5VSD8 79 aa5.62□□□□□ -1.51
C9orf3-214ENST00000473778 RYR1P21817 5038 aa5.61□□□□□ -1.51
C9orf3-214ENST00000473778 KIAA1109Q2LD37 5005 aa5.61□□□□□ -1.51
C9orf3-214ENST00000473778 KRTAP10-6P60371 365 aaPredicted RBP5.6□□□□□ -1.51
C9orf3-214ENST00000473778 KRTAP4-8A0A0G2JLE6 195 aa5.6□□□□□ -1.51
C9orf3-214ENST00000473778 RPL37P61927 97 aaKnown RBP5.6□□□□□ -1.51
C9orf3-214ENST00000473778 NDUFAF8A1L188 74 aa5.59□□□□□ -1.51
C9orf3-214ENST00000473778 KRTAP13-4Q3LI77 160 aa5.58□□□□□ -1.52
C9orf3-214ENST00000473778 LRP2P98164 4655 aa5.56□□□□□ -1.52
C9orf3-214ENST00000473778 A0A0A0MQY5 61 aa5.54□□□□□ -1.52
C9orf3-214ENST00000473778 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
C9orf3-214ENST00000473778 MT1HL1P0DM35 61 aa5.52□□□□□ -1.53
C9orf3-214ENST00000473778 TPRXLQ17RH7 258 aa5.52□□□□□ -1.53
C9orf3-214ENST00000473778 KRTAP19-4Q3LI73 84 aa5.52□□□□□ -1.53
C9orf3-214ENST00000473778 S4R3F8 94 aa5.5□□□□□ -1.53
C9orf3-214ENST00000473778 KRTAP9-7A8MTY7 169 aa5.49□□□□□ -1.53
C9orf3-214ENST00000473778 LCE1DQ5T752 114 aa5.48□□□□□ -1.53
C9orf3-214ENST00000473778 A0A0D9SG42 100 aa5.48□□□□□ -1.53
C9orf3-214ENST00000473778 ABCA13Q86UQ4 5058 aa5.47□□□□□ -1.53
C9orf3-214ENST00000473778 KRTAP4-5Q9BYR2 181 aa5.45□□□□□ -1.54
C9orf3-214ENST00000473778 C10orf95Q9H7T3 257 aa5.44□□□□□ -1.54
C9orf3-214ENST00000473778 KRTAP4-7Q9BYR0 210 aa5.38□□□□□ -1.55
C9orf3-214ENST00000473778 KRTAP12-2P59991 146 aa5.37□□□□□ -1.55
C9orf3-214ENST00000473778 KRTAP12-1P59990 96 aa5.31□□□□□ -1.56
C9orf3-214ENST00000473778 HERC1Q15751 4861 aa5.31□□□□□ -1.56
C9orf3-214ENST00000473778 KRTAP4-9Q9BYQ8 210 aa5.3□□□□□ -1.56
C9orf3-214ENST00000473778 MUC17Q685J3 4493 aa5.29□□□□□ -1.56
C9orf3-214ENST00000473778 LUZP6Q538Z0 58 aa5.28□□□□□ -1.56
C9orf3-214ENST00000473778 KRTAP9-3Q9BYQ3 159 aa5.26□□□□□ -1.57
C9orf3-214ENST00000473778 LCE5AQ5TCM9 118 aa5.2□□□□□ -1.58
C9orf3-214ENST00000473778 KRTAP4-1Q9BYQ7 146 aa5.2□□□□□ -1.58
C9orf3-214ENST00000473778 M0QZ58 72 aa5.2□□□□□ -1.58
C9orf3-214ENST00000473778 KRTAP4-2Q9BYR5 136 aa5.18□□□□□ -1.58
C9orf3-214ENST00000473778 MUC2Q02817 5179 aa5.17□□□□□ -1.58
C9orf3-214ENST00000473778 KRTAP4-11Q9BYQ6 195 aa5.16□□□□□ -1.58
C9orf3-214ENST00000473778 KRTAP19-2Q3LHN2 52 aa5.11□□□□□ -1.59
C9orf3-214ENST00000473778 R4GN34 69 aa5.1□□□□□ -1.59
C9orf3-214ENST00000473778 SEC61BP60468 96 aaKnown RBP5.08□□□□□ -1.6
C9orf3-214ENST00000473778 PLAC4Q8WY50 150 aa5.07□□□□□ -1.6
C9orf3-214ENST00000473778 UBR4Q5T4S7 5183 aa5.03□□□□□ -1.6
C9orf3-214ENST00000473778 HMCN2Q8NDA2 5059 aa5.01□□□□□ -1.61
C9orf3-214ENST00000473778 FLGP20930 4061 aaPredicted RBP4.97□□□□□ -1.61
C9orf3-214ENST00000473778 FAT4Q6V0I7 4981 aa4.91□□□□□ -1.62
C9orf3-214ENST00000473778 RNF213Q63HN8 5207 aa4.89□□□□□ -1.63
C9orf3-214ENST00000473778 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
C9orf3-214ENST00000473778 CAMK2N1Q7Z7J9 78 aa4.83□□□□□ -1.64
C9orf3-214ENST00000473778 PP632Q6XCG6 107 aa4.78□□□□□ -1.64
C9orf3-214ENST00000473778 TNP1P09430 55 aa4.64□□□□□ -1.67
C9orf3-214ENST00000473778 SPRR2GQ9BYE4 73 aa4.64□□□□□ -1.67
C9orf3-214ENST00000473778 PRO2289Q9P1D8 64 aa4.62□□□□□ -1.67
C9orf3-214ENST00000473778 SPRR5A0A1B0GTR4 108 aa4.62□□□□□ -1.67
C9orf3-214ENST00000473778 MT1HP80294 61 aa4.61□□□□□ -1.67
C9orf3-214ENST00000473778 MT1FP04733 61 aa4.57□□□□□ -1.68
C9orf3-214ENST00000473778 M0R2T5 61 aa4.56□□□□□ -1.68
C9orf3-214ENST00000473778 MT2AP02795 61 aa4.55□□□□□ -1.68
C9orf3-214ENST00000473778 KRTAP9-8Q9BYQ0 159 aa4.53□□□□□ -1.68
C9orf3-214ENST00000473778 KRTAP10-10P60014 251 aa4.5□□□□□ -1.69
C9orf3-214ENST00000473778 LCE3AQ5TA76 89 aa4.48□□□□□ -1.69
C9orf3-214ENST00000473778 INE1O15225 51 aa4.47□□□□□ -1.69
C9orf3-214ENST00000473778 KRTAP5-3Q6L8H2 238 aa4.45□□□□□ -1.7
C9orf3-214ENST00000473778 MT1BP07438 61 aa4.42□□□□□ -1.7
C9orf3-214ENST00000473778 KRTAP19-8Q3LI54 63 aa4.42□□□□□ -1.7
C9orf3-214ENST00000473778 KRTAP10-5P60370 271 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms