RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 KRTAP12-2P59991 146 aa2.83□□□□□ -1.96
RTF1-203ENST00000473214 KRTAP13-4Q3LI77 160 aa2.83□□□□□ -1.96
RTF1-203ENST00000473214 ETDCA0A1B0GVM5 59 aa2.82□□□□□ -1.96
RTF1-203ENST00000473214 SMR3BP02814 79 aaPredicted RBP2.82□□□□□ -1.96
RTF1-203ENST00000473214 DEFB114Q30KQ6 69 aa2.82□□□□□ -1.96
RTF1-203ENST00000473214 LINC00575Q6W349 94 aa2.82□□□□□ -1.96
RTF1-203ENST00000473214 LRP2P98164 4655 aa2.81□□□□□ -1.96
RTF1-203ENST00000473214 LINC01590Q5TEZ4 76 aa2.81□□□□□ -1.96
RTF1-203ENST00000473214 KCNQ1DNQ9H478 68 aa2.81□□□□□ -1.96
RTF1-203ENST00000473214 TIMM8BQ9Y5J9 83 aaPredicted RBP2.81□□□□□ -1.96
RTF1-203ENST00000473214 TTTY10Q9BZA0 68 aa2.8□□□□□ -1.96
RTF1-203ENST00000473214 FAT3Q8TDW7 4589 aa2.79□□□□□ -1.96
RTF1-203ENST00000473214 PKHD1L1Q86WI1 4243 aa2.79□□□□□ -1.96
RTF1-203ENST00000473214 SPINK4O60575 86 aa2.78□□□□□ -1.96
RTF1-203ENST00000473214 RPL37P61927 97 aaKnown RBP2.78□□□□□ -1.96
RTF1-203ENST00000473214 UBE2DNLQ8IWF7 75 aa2.78□□□□□ -1.96
RTF1-203ENST00000473214 NDUFA3O95167 84 aa2.77□□□□□ -1.97
RTF1-203ENST00000473214 APELAP0DMC3 54 aa2.77□□□□□ -1.97
RTF1-203ENST00000473214 KRTAP10-1P60331 282 aa2.77□□□□□ -1.97
RTF1-203ENST00000473214 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
RTF1-203ENST00000473214 FAT4Q6V0I7 4981 aa2.76□□□□□ -1.97
RTF1-203ENST00000473214 DEFB131BA0A096LNP1 70 aa2.75□□□□□ -1.97
RTF1-203ENST00000473214 LINC01546A6NGU7 62 aa2.74□□□□□ -1.97
RTF1-203ENST00000473214 ANGP03950 147 aaKnown RBP2.74□□□□□ -1.97
RTF1-203ENST00000473214 PIGYQ3MUY2 71 aa2.74□□□□□ -1.97
RTF1-203ENST00000473214 TNXBP22105 4242 aa2.73□□□□□ -1.97
RTF1-203ENST00000473214 H0YGX0 51 aa2.73□□□□□ -1.97
RTF1-203ENST00000473214 RPL39P5Q59GN2 51 aa2.73□□□□□ -1.97
RTF1-203ENST00000473214 MUC2Q02817 5179 aa2.73□□□□□ -1.97
RTF1-203ENST00000473214 KRTAP10-4P60372 401 aaPredicted RBP2.72□□□□□ -1.97
RTF1-203ENST00000473214 LELP1Q5T871 98 aa2.72□□□□□ -1.97
RTF1-203ENST00000473214 MT1HL1P0DM35 61 aa2.71□□□□□ -1.98
RTF1-203ENST00000473214 DNAH8Q96JB1 4490 aa2.71□□□□□ -1.98
RTF1-203ENST00000473214 SPRR5A0A1B0GTR4 108 aa2.7□□□□□ -1.98
RTF1-203ENST00000473214 H3BUA1 57 aa2.7□□□□□ -1.98
RTF1-203ENST00000473214 CRIPTQ9P021 101 aa2.7□□□□□ -1.98
RTF1-203ENST00000473214 HTN3P15516 51 aa2.69□□□□□ -1.98
RTF1-203ENST00000473214 CRIP1P50238 77 aa2.69□□□□□ -1.98
RTF1-203ENST00000473214 SNRPGP62308 76 aaKnown RBP2.69□□□□□ -1.98
RTF1-203ENST00000473214 PCOTHQ58A44 107 aa2.69□□□□□ -1.98
RTF1-203ENST00000473214 USMG5Q96IX5 58 aa2.69□□□□□ -1.98
RTF1-203ENST00000473214 LPAP08519 4548 aa2.67□□□□□ -1.98
RTF1-203ENST00000473214 DEFB131AP59861 70 aa2.66□□□□□ -1.98
RTF1-203ENST00000473214 DEFB104AQ8WTQ1 72 aa2.66□□□□□ -1.98
RTF1-203ENST00000473214 KRTAP5-8O75690 187 aa2.65□□□□□ -1.99
RTF1-203ENST00000473214 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
RTF1-203ENST00000473214 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
RTF1-203ENST00000473214 CRCT1Q9UGL9 99 aa2.65□□□□□ -1.99
RTF1-203ENST00000473214 FSIP2Q5CZC0 6907 aa2.64□□□□□ -1.99
RTF1-203ENST00000473214 DEFB1P60022 68 aa2.64□□□□□ -1.99
RTF1-203ENST00000473214 RHPN1-AS1Q9BWJ2 59 aa2.63□□□□□ -1.99
RTF1-203ENST00000473214 CDKN2A-AS1Q9UH64 79 aa2.63□□□□□ -1.99
RTF1-203ENST00000473214 SPART-AS1P0CW21 52 aa2.62□□□□□ -1.99
RTF1-203ENST00000473214 LINC00158P58513 81 aa2.62□□□□□ -1.99
RTF1-203ENST00000473214 TP53AIP1Q9HCN2 124 aa2.62□□□□□ -1.99
RTF1-203ENST00000473214 KRTAP12-1P59990 96 aa2.61□□□□□ -1.99
RTF1-203ENST00000473214 KLK9Q2XQG4 91 aa2.61□□□□□ -1.99
RTF1-203ENST00000473214 Q6ZSA8 131 aa2.6□□□□□ -1.99
RTF1-203ENST00000473214 DEFB130BP0DP73 79 aa2.59□□□□□ -1.99
RTF1-203ENST00000473214 DEFB130AP0DP74 79 aa2.59□□□□□ -1.99
RTF1-203ENST00000473214 Q8IZM0 81 aa2.59□□□□□ -1.99
RTF1-203ENST00000473214 K7EIM0 57 aa2.58□□□□□ -2
RTF1-203ENST00000473214 MRPL34Q9BQ48 92 aaKnown RBP2.58□□□□□ -2
RTF1-203ENST00000473214 TMEM167BQ9NRX6 74 aa2.58□□□□□ -2
RTF1-203ENST00000473214 I3L2K1 104 aa2.57□□□□□ -2
RTF1-203ENST00000473214 WT1-ASQ06250 92 aa2.57□□□□□ -2
RTF1-203ENST00000473214 TMEM167AQ8TBQ9 72 aa2.57□□□□□ -2
RTF1-203ENST00000473214 K7EQZ3 153 aa2.56□□□□□ -2
RTF1-203ENST00000473214 LINC00308Q8TCZ7 52 aa2.56□□□□□ -2
RTF1-203ENST00000473214 A0A096LPF7 62 aa2.54□□□□□ -2
RTF1-203ENST00000473214 COX6B2Q6YFQ2 88 aa2.53□□□□□ -2
RTF1-203ENST00000473214 WFDC10BQ8IUB3 73 aa2.53□□□□□ -2
RTF1-203ENST00000473214 ARHGAP5-AS1Q96IT6 56 aa2.53□□□□□ -2
RTF1-203ENST00000473214 NOP10Q9NPE3 64 aaKnown RBP2.51□□□□□ -2.01
RTF1-203ENST00000473214 SPINK9Q5DT21 86 aa2.5□□□□□ -2.01
RTF1-203ENST00000473214 A8MTW9 85 aa2.49□□□□□ -2.01
RTF1-203ENST00000473214 HTN1P15515 57 aa2.49□□□□□ -2.01
RTF1-203ENST00000473214 COX6A2Q02221 97 aa2.49□□□□□ -2.01
RTF1-203ENST00000473214 KRTAP10-10P60014 251 aa2.48□□□□□ -2.01
RTF1-203ENST00000473214 H3BNG1 76 aa2.47□□□□□ -2.01
RTF1-203ENST00000473214 CNFNQ9BYD5 112 aa2.47□□□□□ -2.01
RTF1-203ENST00000473214 SMIM2Q9BVW6 85 aa2.46□□□□□ -2.02
RTF1-203ENST00000473214 PRO0255Q9UI72 69 aa2.46□□□□□ -2.02
RTF1-203ENST00000473214 C10orf95Q9H7T3 257 aa2.45□□□□□ -2.02
RTF1-203ENST00000473214 PRCDQ00LT1 54 aa2.44□□□□□ -2.02
RTF1-203ENST00000473214 MUC17Q685J3 4493 aa2.44□□□□□ -2.02
RTF1-203ENST00000473214 H0YAA0 97 aa2.42□□□□□ -2.02
RTF1-203ENST00000473214 LINC01556Q5JQF7 62 aa2.42□□□□□ -2.02
RTF1-203ENST00000473214 C6orf48Q9UBA6 75 aa2.41□□□□□ -2.02
RTF1-203ENST00000473214 NDUFA1O15239 70 aa2.4□□□□□ -2.03
RTF1-203ENST00000473214 KRTAP4-1Q9BYQ7 146 aa2.4□□□□□ -2.03
RTF1-203ENST00000473214 KRTAP6-3Q3LI67 103 aa2.39□□□□□ -2.03
RTF1-203ENST00000473214 KRTAP13-1Q8IUC0 172 aa2.37□□□□□ -2.03
RTF1-203ENST00000473214 SSPOA2VEC9 5147 aa2.36□□□□□ -2.03
RTF1-203ENST00000473214 SPRR1AP35321 89 aa2.35□□□□□ -2.03
RTF1-203ENST00000473214 H1FX-AS1Q4G0G2 97 aa2.35□□□□□ -2.03
RTF1-203ENST00000473214 IAPPP10997 89 aa2.34□□□□□ -2.03
RTF1-203ENST00000473214 SPINK6Q6UWN8 80 aa2.34□□□□□ -2.03
RTF1-203ENST00000473214 FCGBPQ9Y6R7 5405 aaPredicted RBP2.34□□□□□ -2.04
RTF1-203ENST00000473214 USH2AO75445 5202 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms