RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 ZNF706Q9Y5V0 76 aaPredicted RBP5.92□□□□□ -1.46
APTX-216ENST00000472896 CSAG1Q6PB30 78 aa5.9□□□□□ -1.46
APTX-216ENST00000472896 FAT3Q8TDW7 4589 aa5.9□□□□□ -1.47
APTX-216ENST00000472896 IGLV9-49A0A0B4J1Y8 123 aa5.9□□□□□ -1.47
APTX-216ENST00000472896 Q5W150 140 aa5.9□□□□□ -1.47
APTX-216ENST00000472896 KRTAP4-8A0A0G2JLE6 195 aa5.89□□□□□ -1.47
APTX-216ENST00000472896 CHTF8P0CG12 524 aa5.88□□□□□ -1.47
APTX-216ENST00000472896 MT1HL1P0DM35 61 aa5.88□□□□□ -1.47
APTX-216ENST00000472896 NOTCH2NLQ7Z3S9 236 aa5.87□□□□□ -1.47
APTX-216ENST00000472896 RNF213Q63HN8 5207 aa5.87□□□□□ -1.47
APTX-216ENST00000472896 PKHD1L1Q86WI1 4243 aa5.86□□□□□ -1.47
APTX-216ENST00000472896 ZNF861PO60384 105 aa5.85□□□□□ -1.47
APTX-216ENST00000472896 CIRBP-AS1Q8TBR5 109 aa5.85□□□□□ -1.47
APTX-216ENST00000472896 KRTAP19-1Q8IUB9 90 aa5.85□□□□□ -1.47
APTX-216ENST00000472896 IGKV2-30P06310 120 aa5.83□□□□□ -1.48
APTX-216ENST00000472896 IGLV7-43P04211 117 aa5.81□□□□□ -1.48
APTX-216ENST00000472896 LRP2P98164 4655 aa5.8□□□□□ -1.48
APTX-216ENST00000472896 KRTAP25-1Q3LHN0 102 aa5.77□□□□□ -1.49
APTX-216ENST00000472896 TNXBP22105 4242 aa5.77□□□□□ -1.49
APTX-216ENST00000472896 SPINK6Q6UWN8 80 aa5.75□□□□□ -1.49
APTX-216ENST00000472896 SPACA4Q8TDM5 124 aa5.75□□□□□ -1.49
APTX-216ENST00000472896 ROMO1P60602 79 aa5.74□□□□□ -1.49
APTX-216ENST00000472896 IGKV2D-30A0A075B6S6 120 aa5.73□□□□□ -1.49
APTX-216ENST00000472896 PANO1I0J062 215 aa5.72□□□□□ -1.49
APTX-216ENST00000472896 A8MUU9 505 aa5.72□□□□□ -1.49
APTX-216ENST00000472896 SSBP3-AS1Q7Z2R9 100 aa5.72□□□□□ -1.49
APTX-216ENST00000472896 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.72□□□□□ -1.49
APTX-216ENST00000472896 KRTAP4-7Q9BYR0 210 aa5.7□□□□□ -1.5
APTX-216ENST00000472896 SEC61BP60468 96 aaKnown RBP5.69□□□□□ -1.5
APTX-216ENST00000472896 PSORS1C2Q9UIG4 136 aa5.68□□□□□ -1.5
APTX-216ENST00000472896 KRTAP10-8P60410 259 aa5.65□□□□□ -1.5
APTX-216ENST00000472896 LCE1DQ5T752 114 aa5.65□□□□□ -1.5
APTX-216ENST00000472896 LINC00304Q8N9R0 145 aa5.65□□□□□ -1.5
APTX-216ENST00000472896 ANAPC11Q9NYG5 84 aa5.65□□□□□ -1.5
APTX-216ENST00000472896 KRTAP16-1A8MUX0 517 aa5.65□□□□□ -1.51
APTX-216ENST00000472896 H0YAA0 97 aa5.61□□□□□ -1.51
APTX-216ENST00000472896 K7ERS5 55 aa5.59□□□□□ -1.51
APTX-216ENST00000472896 A0A1B0GU33 70 aa5.58□□□□□ -1.52
APTX-216ENST00000472896 LPAP08519 4548 aa5.57□□□□□ -1.52
APTX-216ENST00000472896 SPINK1P00995 79 aa5.56□□□□□ -1.52
APTX-216ENST00000472896 H1FX-AS1Q4G0G2 97 aa5.55□□□□□ -1.52
APTX-216ENST00000472896 KRTAP4-9Q9BYQ8 210 aa5.53□□□□□ -1.52
APTX-216ENST00000472896 P0C880 135 aa5.52□□□□□ -1.53
APTX-216ENST00000472896 MUC2Q02817 5179 aa5.48□□□□□ -1.53
APTX-216ENST00000472896 TYMSOSQ8TAI1 123 aa5.47□□□□□ -1.53
APTX-216ENST00000472896 KRTAP4-2Q9BYR5 136 aa5.47□□□□□ -1.53
APTX-216ENST00000472896 FAT4Q6V0I7 4981 aa5.46□□□□□ -1.54
APTX-216ENST00000472896 KRTAP13-2Q52LG2 175 aa5.45□□□□□ -1.54
APTX-216ENST00000472896 SPINT4Q6UDR6 99 aa5.41□□□□□ -1.54
APTX-216ENST00000472896 CRIPTQ9P021 101 aa5.38□□□□□ -1.55
APTX-216ENST00000472896 COX6B2Q6YFQ2 88 aa5.37□□□□□ -1.55
APTX-216ENST00000472896 RPL37P61927 97 aaKnown RBP5.37□□□□□ -1.55
APTX-216ENST00000472896 RPS29P62273 56 aaKnown RBP5.35□□□□□ -1.55
APTX-216ENST00000472896 C20orf166-AS1Q96NR2 134 aa5.35□□□□□ -1.55
APTX-216ENST00000472896 KRTAP1-4P0C5Y4 121 aa5.34□□□□□ -1.55
APTX-216ENST00000472896 KRTAP15-1Q3LI76 137 aa5.34□□□□□ -1.55
APTX-216ENST00000472896 KRTAP3-1Q9BYR8 98 aa5.34□□□□□ -1.55
APTX-216ENST00000472896 CRCT1Q9UGL9 99 aa5.33□□□□□ -1.56
APTX-216ENST00000472896 TPRXLQ17RH7 258 aa5.32□□□□□ -1.56
APTX-216ENST00000472896 NDUFAF8A1L188 74 aa5.29□□□□□ -1.56
APTX-216ENST00000472896 KRTAP4-11Q9BYQ6 195 aa5.29□□□□□ -1.56
APTX-216ENST00000472896 LUZP6Q538Z0 58 aa5.26□□□□□ -1.57
APTX-216ENST00000472896 FSIP2Q5CZC0 6907 aa5.24□□□□□ -1.57
APTX-216ENST00000472896 LCE4AQ5TA78 99 aa5.23□□□□□ -1.57
APTX-216ENST00000472896 KRTAP10-6P60371 365 aaPredicted RBP5.21□□□□□ -1.58
APTX-216ENST00000472896 MUC17Q685J3 4493 aa5.2□□□□□ -1.58
APTX-216ENST00000472896 KRTAP4-1Q9BYQ7 146 aa5.17□□□□□ -1.58
APTX-216ENST00000472896 C10orf95Q9H7T3 257 aa5.16□□□□□ -1.58
APTX-216ENST00000472896 KRTAP13-4Q3LI77 160 aa5.16□□□□□ -1.58
APTX-216ENST00000472896 A0A0D9SG42 100 aa5.15□□□□□ -1.58
APTX-216ENST00000472896 S4R3F8 94 aa5.14□□□□□ -1.59
APTX-216ENST00000472896 C9orf92A6NGG3 77 aa5.14□□□□□ -1.59
APTX-216ENST00000472896 KRTAP9-7A8MTY7 169 aa5.06□□□□□ -1.6
APTX-216ENST00000472896 CAMK2N1Q7Z7J9 78 aa5.06□□□□□ -1.6
APTX-216ENST00000472896 KRTAP23-1A1A580 65 aa5.05□□□□□ -1.6
APTX-216ENST00000472896 KRTAP12-2P59991 146 aa5.05□□□□□ -1.6
APTX-216ENST00000472896 LCE5AQ5TCM9 118 aa5.05□□□□□ -1.6
APTX-216ENST00000472896 KRTAP19-2Q3LHN2 52 aa5.04□□□□□ -1.6
APTX-216ENST00000472896 KRTAP12-1P59990 96 aa5.03□□□□□ -1.6
APTX-216ENST00000472896 KRTAP5-3Q6L8H2 238 aa5.03□□□□□ -1.6
APTX-216ENST00000472896 MT1HP80294 61 aa5.02□□□□□ -1.61
APTX-216ENST00000472896 M0QZ58 72 aa4.99□□□□□ -1.61
APTX-216ENST00000472896 PLAC4Q8WY50 150 aa4.92□□□□□ -1.62
APTX-216ENST00000472896 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
APTX-216ENST00000472896 KRTAP19-4Q3LI73 84 aa4.88□□□□□ -1.63
APTX-216ENST00000472896 M0R2T5 61 aa4.85□□□□□ -1.63
APTX-216ENST00000472896 KRTAP9-8Q9BYQ0 159 aa4.85□□□□□ -1.63
APTX-216ENST00000472896 FLGP20930 4061 aaPredicted RBP4.79□□□□□ -1.64
APTX-216ENST00000472896 PP632Q6XCG6 107 aa4.79□□□□□ -1.64
APTX-216ENST00000472896 SSPOA2VEC9 5147 aa4.76□□□□□ -1.65
APTX-216ENST00000472896 FCGBPQ9Y6R7 5405 aaPredicted RBP4.75□□□□□ -1.65
APTX-216ENST00000472896 USH2AO75445 5202 aa4.75□□□□□ -1.65
APTX-216ENST00000472896 R4GN34 69 aa4.68□□□□□ -1.66
APTX-216ENST00000472896 MT2AP02795 61 aa4.6□□□□□ -1.67
APTX-216ENST00000472896 SYNE2Q8WXH0 6885 aaKnown RBP4.59□□□□□ -1.67
APTX-216ENST00000472896 MACF1Q9UPN3 7388 aaKnown RBP4.57□□□□□ -1.68
APTX-216ENST00000472896 SPRR5A0A1B0GTR4 108 aa4.57□□□□□ -1.68
APTX-216ENST00000472896 MT1FP04733 61 aa4.57□□□□□ -1.68
APTX-216ENST00000472896 PRO2289Q9P1D8 64 aa4.55□□□□□ -1.68
APTX-216ENST00000472896 KRTAP6-3Q3LI67 103 aa4.53□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms