RNA–Protein interactions for RNA: ENST00000472888.1

RFXAP-202, Transcript of regulatory factor X associated protein, humanhuman

TSL 3

Gene RFXAP, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAP-202ENST00000472888 ITPR3Q14573 2671 aa-0.41□□□□□ -2.47
RFXAP-202ENST00000472888 TNP1P09430 55 aa-0.41□□□□□ -2.48
RFXAP-202ENST00000472888 MAST1Q9Y2H9 1570 aa-0.41□□□□□ -2.48
RFXAP-202ENST00000472888 DNAH7Q8WXX0 4024 aa-0.42□□□□□ -2.48
RFXAP-202ENST00000472888 SPTBN5Q9NRC6 3674 aaKnown RBP-0.42□□□□□ -2.48
RFXAP-202ENST00000472888 A0A0C4DFX4 3053 aa-0.42□□□□□ -2.48
RFXAP-202ENST00000472888 SMIM27A0A1W2PRY6 76 aa-0.43□□□□□ -2.48
RFXAP-202ENST00000472888 DNAH8Q96JB1 4490 aa-0.43□□□□□ -2.48
RFXAP-202ENST00000472888 USP9YO00507 2555 aaPredicted RBP-0.43□□□□□ -2.48
RFXAP-202ENST00000472888 CELSR3Q9NYQ7 3312 aa-0.43□□□□□ -2.48
RFXAP-202ENST00000472888 SMG1Q96Q15 3661 aaKnown RBP-0.43□□□□□ -2.48
RFXAP-202ENST00000472888 SRCAPQ6ZRS2 3230 aa-0.43□□□□□ -2.48
RFXAP-202ENST00000472888 ACACBO00763 2458 aa-0.44□□□□□ -2.48
RFXAP-202ENST00000472888 SPENQ96T58 3664 aaKnown RBP-0.44□□□□□ -2.48
RFXAP-202ENST00000472888 RIF1Q5UIP0 2472 aaKnown RBP-0.44□□□□□ -2.48
RFXAP-202ENST00000472888 NIPBLQ6KC79 2804 aaeCLIP-0.45□□□□□ -2.48
RFXAP-202ENST00000472888 DNAH10Q8IVF4 4471 aa-0.45□□□□□ -2.48
RFXAP-202ENST00000472888 CCDC168Q8NDH2 2452 aa-0.45□□□□□ -2.48
RFXAP-202ENST00000472888 DNAH5Q8TE73 4624 aa-0.46□□□□□ -2.48
RFXAP-202ENST00000472888 DNAH17Q9UFH2 4485 aa-0.46□□□□□ -2.48
RFXAP-202ENST00000472888 M0QY20 66 aa-0.47□□□□□ -2.48
RFXAP-202ENST00000472888 PLNP26678 52 aa-0.47□□□□□ -2.48
RFXAP-202ENST00000472888 KAAG1Q9UBP8 84 aa-0.47□□□□□ -2.48
RFXAP-202ENST00000472888 ABCA13Q86UQ4 5058 aa-0.48□□□□□ -2.49
RFXAP-202ENST00000472888 A8MTW9 85 aa-0.48□□□□□ -2.49
RFXAP-202ENST00000472888 MT1HP80294 61 aa-0.48□□□□□ -2.49
RFXAP-202ENST00000472888 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.48□□□□□ -2.49
RFXAP-202ENST00000472888 RANBP2P49792 3224 aaKnown RBP-0.49□□□□□ -2.49
RFXAP-202ENST00000472888 EFCAB6Q5THR3 1501 aa-0.49□□□□□ -2.49
RFXAP-202ENST00000472888 COL12A1Q99715 3063 aa-0.49□□□□□ -2.49
RFXAP-202ENST00000472888 M0QZ58 72 aa-0.5□□□□□ -2.49
RFXAP-202ENST00000472888 TRIOO75962 3097 aa-0.5□□□□□ -2.49
RFXAP-202ENST00000472888 AGLP35573 1532 aa-0.51□□□□□ -2.49
RFXAP-202ENST00000472888 ADCY10Q96PN6 1610 aa-0.52□□□□□ -2.49
RFXAP-202ENST00000472888 USP9XQ93008 2570 aaPredicted RBP-0.52□□□□□ -2.49
RFXAP-202ENST00000472888 CLPSL2Q6UWE3 100 aa-0.52□□□□□ -2.49
RFXAP-202ENST00000472888 WFDC10BQ8IUB3 73 aa-0.52□□□□□ -2.49
RFXAP-202ENST00000472888 CSMD1Q96PZ7 3565 aa-0.52□□□□□ -2.49
RFXAP-202ENST00000472888 EYSQ5T1H1 3165 aa-0.53□□□□□ -2.49
RFXAP-202ENST00000472888 MT1XP80297 61 aa-0.53□□□□□ -2.49
RFXAP-202ENST00000472888 COL6A5A8TX70 2615 aa-0.53□□□□□ -2.49
RFXAP-202ENST00000472888 SYCP2Q9BX26 1530 aa-0.54□□□□□ -2.5
RFXAP-202ENST00000472888 TEX15Q9BXT5 2789 aa-0.54□□□□□ -2.5
RFXAP-202ENST00000472888 ZFHX4Q86UP3 3567 aa-0.54□□□□□ -2.5
RFXAP-202ENST00000472888 TRRAPQ9Y4A5 3859 aa-0.54□□□□□ -2.5
RFXAP-202ENST00000472888 MT1HL1P0DM35 61 aa-0.54□□□□□ -2.5
RFXAP-202ENST00000472888 CMC2Q9NRP2 79 aa-0.54□□□□□ -2.5
RFXAP-202ENST00000472888 CHD7Q9P2D1 2997 aa-0.54□□□□□ -2.5
RFXAP-202ENST00000472888 KIF21BO75037 1637 aa-0.55□□□□□ -2.5
RFXAP-202ENST00000472888 A0A1B0GUL6 1792 aa-0.55□□□□□ -2.5
RFXAP-202ENST00000472888 DEFB1P60022 68 aa-0.56□□□□□ -2.5
RFXAP-202ENST00000472888 KRTAP19-5Q3LI72 72 aa-0.56□□□□□ -2.5
RFXAP-202ENST00000472888 ITPR1Q14643 2758 aa-0.57□□□□□ -2.5
RFXAP-202ENST00000472888 TLN2Q9Y4G6 2542 aa-0.57□□□□□ -2.5
RFXAP-202ENST00000472888 FRYQ5TBA9 3013 aa-0.57□□□□□ -2.5
RFXAP-202ENST00000472888 KRTAP20-1Q3LI63 56 aa-0.57□□□□□ -2.5
RFXAP-202ENST00000472888 CSMD2Q7Z408 3487 aa-0.57□□□□□ -2.5
RFXAP-202ENST00000472888 C5orf42Q9H799 3197 aa-0.58□□□□□ -2.5
RFXAP-202ENST00000472888 MT1EP04732 61 aa-0.58□□□□□ -2.5
RFXAP-202ENST00000472888 KRTAP8-1Q8IUC2 63 aa-0.58□□□□□ -2.5
RFXAP-202ENST00000472888 PREX2Q70Z35 1606 aa-0.58□□□□□ -2.5
RFXAP-202ENST00000472888 MYO9AB2RTY4 2548 aa-0.58□□□□□ -2.5
RFXAP-202ENST00000472888 LRBAP50851 2863 aa-0.58□□□□□ -2.5
RFXAP-202ENST00000472888 MT1BP07438 61 aa-0.59□□□□□ -2.5
RFXAP-202ENST00000472888 MT1LQ93083 61 aa-0.59□□□□□ -2.5
RFXAP-202ENST00000472888 ADGRG4Q8IZF6 3080 aa-0.59□□□□□ -2.5
RFXAP-202ENST00000472888 ABCA5Q8WWZ7 1642 aa-0.6□□□□□ -2.5
RFXAP-202ENST00000472888 SMR3BP02814 79 aaPredicted RBP-0.6□□□□□ -2.51
RFXAP-202ENST00000472888 MT1GP13640 62 aa-0.6□□□□□ -2.51
RFXAP-202ENST00000472888 DEFB131AP59861 70 aa-0.6□□□□□ -2.51
RFXAP-202ENST00000472888 MT1MQ8N339 61 aa-0.6□□□□□ -2.51
RFXAP-202ENST00000472888 FAM208AQ9UK61 1670 aaKnown RBP-0.6□□□□□ -2.51
RFXAP-202ENST00000472888 MYO15AQ9UKN7 3530 aa-0.6□□□□□ -2.51
RFXAP-202ENST00000472888 DMXL2Q8TDJ6 3036 aa-0.61□□□□□ -2.51
RFXAP-202ENST00000472888 SPTAN1Q13813 2472 aaKnown RBP-0.61□□□□□ -2.51
RFXAP-202ENST00000472888 MT2AP02795 61 aa-0.61□□□□□ -2.51
RFXAP-202ENST00000472888 CFAP46Q8IYW2 2715 aa-0.61□□□□□ -2.51
RFXAP-202ENST00000472888 ABCC8Q09428 1581 aa-0.62□□□□□ -2.51
RFXAP-202ENST00000472888 LMO7Q8WWI1 1683 aa-0.62□□□□□ -2.51
RFXAP-202ENST00000472888 CEP295Q9C0D2 2601 aa-0.62□□□□□ -2.51
RFXAP-202ENST00000472888 FANCD2Q9BXW9 1451 aa-0.62□□□□□ -2.51
RFXAP-202ENST00000472888 FREM2Q5SZK8 3169 aa-0.63□□□□□ -2.51
RFXAP-202ENST00000472888 ATMQ13315 3056 aa-0.63□□□□□ -2.51
RFXAP-202ENST00000472888 VPS13CQ709C8 3753 aa-0.64□□□□□ -2.51
RFXAP-202ENST00000472888 DMDP11532 3685 aa-0.64□□□□□ -2.51
RFXAP-202ENST00000472888 TFF3Q07654 80 aa-0.65□□□□□ -2.51
RFXAP-202ENST00000472888 SMIM2Q9BVW6 85 aa-0.65□□□□□ -2.51
RFXAP-202ENST00000472888 MROH2AA6NES4 1674 aa-0.65□□□□□ -2.51
RFXAP-202ENST00000472888 ITPR2Q14571 2701 aa-0.66□□□□□ -2.51
RFXAP-202ENST00000472888 TLN1Q9Y490 2541 aaKnown RBP-0.66□□□□□ -2.51
RFXAP-202ENST00000472888 MGAQ8IWI9 3026 aa-0.66□□□□□ -2.51
RFXAP-202ENST00000472888 BOD1L1Q8NFC6 3051 aa-0.66□□□□□ -2.52
RFXAP-202ENST00000472888 LINC01546A6NGU7 62 aa-0.67□□□□□ -2.52
RFXAP-202ENST00000472888 KRTAP19-6Q3LI70 58 aa-0.67□□□□□ -2.52
RFXAP-202ENST00000472888 PRUNE2Q8WUY3 3088 aa-0.68□□□□□ -2.52
RFXAP-202ENST00000472888 NRXN3Q9Y4C0 1643 aa-0.69□□□□□ -2.52
RFXAP-202ENST00000472888 SPEGQ15772 3267 aa-0.7□□□□□ -2.52
RFXAP-202ENST00000472888 SNRPGP15A8MWD9 76 aa-0.7□□□□□ -2.52
RFXAP-202ENST00000472888 SPART-AS1P0CW21 52 aa-0.7□□□□□ -2.52
RFXAP-202ENST00000472888 WDFY3Q8IZQ1 3526 aa-0.7□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms