RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 KRTAP3-3Q9BYR6 98 aa9.43□□□□□ -0.9
SF1-213ENST00000472725 C20orf197Q8N268 126 aa9.42□□□□□ -0.9
SF1-213ENST00000472725 SNURFQ9Y675 71 aa9.42□□□□□ -0.9
SF1-213ENST00000472725 NDUFC1O43677 76 aa9.41□□□□□ -0.9
SF1-213ENST00000472725 COX7CP15954 63 aa9.39□□□□□ -0.91
SF1-213ENST00000472725 SPANXA2-OT1Q8N9U9 137 aa9.34□□□□□ -0.91
SF1-213ENST00000472725 ACYP2P14621 99 aa9.33□□□□□ -0.92
SF1-213ENST00000472725 KRTAP9-3Q9BYQ3 159 aa9.32□□□□□ -0.92
SF1-213ENST00000472725 ANAPC13Q9BS18 74 aa9.27□□□□□ -0.93
SF1-213ENST00000472725 H0YAA0 97 aa9.26□□□□□ -0.93
SF1-213ENST00000472725 SPTSSBQ8NFR3 76 aa9.17□□□□□ -0.94
SF1-213ENST00000472725 LCE2BO14633 110 aa9.15□□□□□ -0.94
SF1-213ENST00000472725 H7BZZ5 65 aa9.14□□□□□ -0.95
SF1-213ENST00000472725 CHKB-CPT1BH3BT56 60 aa9.13□□□□□ -0.95
SF1-213ENST00000472725 CRIPTQ9P021 101 aa9.13□□□□□ -0.95
SF1-213ENST00000472725 CRCT1Q9UGL9 99 aa9.11□□□□□ -0.95
SF1-213ENST00000472725 KRTAP9-6A0A140TA67 174 aa9.09□□□□□ -0.95
SF1-213ENST00000472725 ADM2Q7Z4H4 148 aa9.07□□□□□ -0.96
SF1-213ENST00000472725 CYSTM1Q9H1C7 97 aa9.07□□□□□ -0.96
SF1-213ENST00000472725 SPRR2GQ9BYE4 73 aa9.05□□□□□ -0.96
SF1-213ENST00000472725 KRTAP19-1Q8IUB9 90 aa9.04□□□□□ -0.96
SF1-213ENST00000472725 CCDC179H3BU77 68 aa9.02□□□□□ -0.97
SF1-213ENST00000472725 FSIP2Q5CZC0 6907 aa8.99□□□□□ -0.97
SF1-213ENST00000472725 COA5Q86WW8 74 aa8.98□□□□□ -0.97
SF1-213ENST00000472725 USH2AO75445 5202 aa8.93□□□□□ -0.98
SF1-213ENST00000472725 KRTAP19-8Q3LI54 63 aa8.92□□□□□ -0.98
SF1-213ENST00000472725 KRTAP3-2Q9BYR7 98 aa8.92□□□□□ -0.98
SF1-213ENST00000472725 ATP5EP56381 51 aaPredicted RBP8.91□□□□□ -0.98
SF1-213ENST00000472725 P0C880 135 aa8.9□□□□□ -0.98
SF1-213ENST00000472725 Q5VV11 94 aa8.87□□□□□ -0.99
SF1-213ENST00000472725 R4GN34 69 aa8.85□□□□□ -0.99
SF1-213ENST00000472725 KRTAP19-6Q3LI70 58 aa8.82□□□□□ -1
SF1-213ENST00000472725 MT1BP07438 61 aa8.8□□□□□ -1
SF1-213ENST00000472725 TMEM258P61165 79 aa8.8□□□□□ -1
SF1-213ENST00000472725 M0QZ58 72 aa8.77□□□□□ -1.01
SF1-213ENST00000472725 SSPOA2VEC9 5147 aa8.74□□□□□ -1.01
SF1-213ENST00000472725 SEC61GP60059 68 aa8.73□□□□□ -1.01
SF1-213ENST00000472725 SERP1Q9Y6X1 66 aa8.69□□□□□ -1.02
SF1-213ENST00000472725 PLAC4Q8WY50 150 aa8.6□□□□□ -1.03
SF1-213ENST00000472725 LINC01554Q52M75 96 aa8.57□□□□□ -1.04
SF1-213ENST00000472725 A6NN06 94 aa8.56□□□□□ -1.04
SF1-213ENST00000472725 FCGBPQ9Y6R7 5405 aaPredicted RBP8.55□□□□□ -1.04
SF1-213ENST00000472725 KRTAP10-5P60370 271 aa8.55□□□□□ -1.04
SF1-213ENST00000472725 A0A1B0GU69 56 aa8.54□□□□□ -1.04
SF1-213ENST00000472725 A0A1B0GU33 70 aa8.5□□□□□ -1.05
SF1-213ENST00000472725 PCP4P48539 62 aa8.47□□□□□ -1.05
SF1-213ENST00000472725 KRTAP13-4Q3LI77 160 aa8.47□□□□□ -1.05
SF1-213ENST00000472725 PRR15LQ9BU68 103 aa8.46□□□□□ -1.06
SF1-213ENST00000472725 PRO2289Q9P1D8 64 aa8.46□□□□□ -1.06
SF1-213ENST00000472725 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.45□□□□□ -1.06
SF1-213ENST00000472725 LINC01558Q9Y6Z2 57 aa8.45□□□□□ -1.06
SF1-213ENST00000472725 MT1XP80297 61 aa8.36□□□□□ -1.07
SF1-213ENST00000472725 SPATA8Q6RVD6 105 aa8.34□□□□□ -1.07
SF1-213ENST00000472725 SMIM26A0A096LP01 95 aa8.29□□□□□ -1.08
SF1-213ENST00000472725 V9GYY9 64 aa8.29□□□□□ -1.08
SF1-213ENST00000472725 A0A0D9SG42 100 aa8.26□□□□□ -1.09
SF1-213ENST00000472725 KRTAP9-7A8MTY7 169 aa8.22□□□□□ -1.09
SF1-213ENST00000472725 RPS28P62857 69 aaKnown RBP8.22□□□□□ -1.09
SF1-213ENST00000472725 Q1T7F1 81 aa8.21□□□□□ -1.1
SF1-213ENST00000472725 CAMK2N1Q7Z7J9 78 aa8.19□□□□□ -1.1
SF1-213ENST00000472725 UQCR11O14957 56 aa8.18□□□□□ -1.1
SF1-213ENST00000472725 MACF1Q9UPN3 7388 aaKnown RBP8.16□□□□□ -1.1
SF1-213ENST00000472725 KRTAP12-1P59990 96 aa8.15□□□□□ -1.1
SF1-213ENST00000472725 KRTAP12-2P59991 146 aa8.15□□□□□ -1.1
SF1-213ENST00000472725 SPINT4Q6UDR6 99 aa8.14□□□□□ -1.11
SF1-213ENST00000472725 A8MU10 97 aa8.1□□□□□ -1.11
SF1-213ENST00000472725 KRTAP6-3Q3LI67 103 aa8.1□□□□□ -1.11
SF1-213ENST00000472725 PSPHP1O15172 72 aa8.04□□□□□ -1.12
SF1-213ENST00000472725 MIR22HGQ0VDD5 57 aa8□□□□□ -1.13
SF1-213ENST00000472725 SYNE2Q8WXH0 6885 aaKnown RBP7.99□□□□□ -1.13
SF1-213ENST00000472725 KRTAP10-12P60413 245 aa7.99□□□□□ -1.13
SF1-213ENST00000472725 KRTAP10-7P60409 375 aaPredicted RBP7.96□□□□□ -1.14
SF1-213ENST00000472725 KRTAP5-9P26371 169 aa7.91□□□□□ -1.14
SF1-213ENST00000472725 KRTAP8-1Q8IUC2 63 aa7.87□□□□□ -1.15
SF1-213ENST00000472725 A6NED7 52 aa7.84□□□□□ -1.15
SF1-213ENST00000472725 K7ERS5 55 aa7.82□□□□□ -1.16
SF1-213ENST00000472725 KRTAP4-8A0A0G2JLE6 195 aa7.81□□□□□ -1.16
SF1-213ENST00000472725 KRTAP4-8Q9BYQ9 185 aa7.81□□□□□ -1.16
SF1-213ENST00000472725 KMT2DO14686 5537 aa7.75□□□□□ -1.17
SF1-213ENST00000472725 C10orf95Q9H7T3 257 aa7.74□□□□□ -1.17
SF1-213ENST00000472725 SPRR2FQ96RM1 72 aa7.73□□□□□ -1.17
SF1-213ENST00000472725 TNP1P09430 55 aa7.7□□□□□ -1.18
SF1-213ENST00000472725 CDC42SE1Q9NRR8 79 aa7.62□□□□□ -1.19
SF1-213ENST00000472725 MUC12Q9UKN1 5478 aa7.55□□□□□ -1.2
SF1-213ENST00000472725 SPRR2EP22531 72 aa7.51□□□□□ -1.21
SF1-213ENST00000472725 SPRR2BP35325 72 aa7.51□□□□□ -1.21
SF1-213ENST00000472725 SPRR2AP35326 72 aa7.51□□□□□ -1.21
SF1-213ENST00000472725 KRTAP25-1Q3LHN0 102 aa7.51□□□□□ -1.21
SF1-213ENST00000472725 NEBP20929 6669 aa7.5□□□□□ -1.21
SF1-213ENST00000472725 LCE1AQ5T7P2 110 aa7.49□□□□□ -1.21
SF1-213ENST00000472725 KRTAP19-7Q3SYF9 63 aa7.47□□□□□ -1.21
SF1-213ENST00000472725 LCE3AQ5TA76 89 aa7.43□□□□□ -1.22
SF1-213ENST00000472725 MDN1Q9NU22 5596 aa7.41□□□□□ -1.22
SF1-213ENST00000472725 MT1EP04732 61 aa7.39□□□□□ -1.23
SF1-213ENST00000472725 KRTAP19-5Q3LI72 72 aa7.38□□□□□ -1.23
SF1-213ENST00000472725 ROMO1P60602 79 aa7.33□□□□□ -1.24
SF1-213ENST00000472725 KRTAP23-1A1A580 65 aa7.31□□□□□ -1.24
SF1-213ENST00000472725 SPRR2DP22532 72 aa7.26□□□□□ -1.25
SF1-213ENST00000472725 KRTAP20-1Q3LI63 56 aa7.26□□□□□ -1.25
SF1-213ENST00000472725 KRTAP19-3Q7Z4W3 81 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms