RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 IGKV2-30P06310 120 aa2.71□□□□□ -1.98
TM4SF1-202ENST00000472441 COA5Q86WW8 74 aa2.71□□□□□ -1.98
TM4SF1-202ENST00000472441 RPS29P62273 56 aaKnown RBP2.7□□□□□ -1.98
TM4SF1-202ENST00000472441 PCLOQ9Y6V0 5065 aa2.7□□□□□ -1.98
TM4SF1-202ENST00000472441 PSPHP1O15172 72 aa2.69□□□□□ -1.98
TM4SF1-202ENST00000472441 HRES1P13985 223 aa2.69□□□□□ -1.98
TM4SF1-202ENST00000472441 Q8N1X5 172 aa2.69□□□□□ -1.98
TM4SF1-202ENST00000472441 KRTAP4-11Q9BYQ6 195 aa2.68□□□□□ -1.98
TM4SF1-202ENST00000472441 HMCN1Q96RW7 5635 aa2.68□□□□□ -1.98
TM4SF1-202ENST00000472441 Q1T7F1 81 aa2.67□□□□□ -1.98
TM4SF1-202ENST00000472441 A8MUN3 132 aa2.66□□□□□ -1.98
TM4SF1-202ENST00000472441 ACYP2P14621 99 aa2.66□□□□□ -1.98
TM4SF1-202ENST00000472441 TNXBP22105 4242 aa2.66□□□□□ -1.98
TM4SF1-202ENST00000472441 CHKB-CPT1BH3BT56 60 aa2.65□□□□□ -1.98
TM4SF1-202ENST00000472441 KRTAP10-8P60410 259 aa2.65□□□□□ -1.98
TM4SF1-202ENST00000472441 UBR4Q5T4S7 5183 aa2.65□□□□□ -1.99
TM4SF1-202ENST00000472441 PRR15LQ9BU68 103 aa2.65□□□□□ -1.99
TM4SF1-202ENST00000472441 C7orf65Q6ZTY9 151 aa2.64□□□□□ -1.99
TM4SF1-202ENST00000472441 RBM12B-AS1Q9P1G2 102 aa2.64□□□□□ -1.99
TM4SF1-202ENST00000472441 A8MUU9 505 aa2.64□□□□□ -1.99
TM4SF1-202ENST00000472441 DMAC1Q96GE9 116 aa2.64□□□□□ -1.99
TM4SF1-202ENST00000472441 FAT4Q6V0I7 4981 aa2.63□□□□□ -1.99
TM4SF1-202ENST00000472441 C20orf166-AS1Q96NR2 134 aa2.63□□□□□ -1.99
TM4SF1-202ENST00000472441 Q5VV11 94 aa2.62□□□□□ -1.99
TM4SF1-202ENST00000472441 SPINK7P58062 85 aa2.61□□□□□ -1.99
TM4SF1-202ENST00000472441 LINC01558Q9Y6Z2 57 aa2.6□□□□□ -1.99
TM4SF1-202ENST00000472441 ATP11AUNQ6ZP68 121 aa2.6□□□□□ -1.99
TM4SF1-202ENST00000472441 MT1HL1P0DM35 61 aa2.59□□□□□ -1.99
TM4SF1-202ENST00000472441 Q75L30 129 aa2.59□□□□□ -1.99
TM4SF1-202ENST00000472441 A6NED7 52 aa2.59□□□□□ -1.99
TM4SF1-202ENST00000472441 A8MU10 97 aa2.59□□□□□ -2
TM4SF1-202ENST00000472441 A0A1B0GU69 56 aa2.57□□□□□ -2
TM4SF1-202ENST00000472441 A0A0A0MQY5 61 aa2.56□□□□□ -2
TM4SF1-202ENST00000472441 RPL37P61927 97 aaKnown RBP2.56□□□□□ -2
TM4SF1-202ENST00000472441 KRTAP3-1Q9BYR8 98 aa2.56□□□□□ -2
TM4SF1-202ENST00000472441 KRTAP19-1Q8IUB9 90 aa2.55□□□□□ -2
TM4SF1-202ENST00000472441 SPTSSBQ8NFR3 76 aa2.55□□□□□ -2
TM4SF1-202ENST00000472441 KTN1-AS1Q86SY8 53 aa2.55□□□□□ -2
TM4SF1-202ENST00000472441 LCA10Q71F78 164 aa2.55□□□□□ -2
TM4SF1-202ENST00000472441 COX6B2Q6YFQ2 88 aa2.53□□□□□ -2
TM4SF1-202ENST00000472441 CDC42SE1Q9NRR8 79 aa2.52□□□□□ -2.01
TM4SF1-202ENST00000472441 HMCN2Q8NDA2 5059 aa2.5□□□□□ -2.01
TM4SF1-202ENST00000472441 TPRXLQ17RH7 258 aa2.5□□□□□ -2.01
TM4SF1-202ENST00000472441 UQCR11O14957 56 aa2.49□□□□□ -2.01
TM4SF1-202ENST00000472441 MIR22HGQ0VDD5 57 aa2.48□□□□□ -2.01
TM4SF1-202ENST00000472441 SPATA8Q6RVD6 105 aa2.46□□□□□ -2.01
TM4SF1-202ENST00000472441 S4R3F8 94 aa2.46□□□□□ -2.01
TM4SF1-202ENST00000472441 FSIP2Q5CZC0 6907 aa2.46□□□□□ -2.02
TM4SF1-202ENST00000472441 A0A1B0GU33 70 aa2.45□□□□□ -2.02
TM4SF1-202ENST00000472441 PRAC1Q96KF2 57 aa2.45□□□□□ -2.02
TM4SF1-202ENST00000472441 H1FX-AS1Q4G0G2 97 aa2.44□□□□□ -2.02
TM4SF1-202ENST00000472441 LINC01554Q52M75 96 aa2.44□□□□□ -2.02
TM4SF1-202ENST00000472441 MUC17Q685J3 4493 aa2.43□□□□□ -2.02
TM4SF1-202ENST00000472441 A6NN06 94 aa2.43□□□□□ -2.02
TM4SF1-202ENST00000472441 SEC61BP60468 96 aaKnown RBP2.43□□□□□ -2.02
TM4SF1-202ENST00000472441 H0YAA0 97 aa2.42□□□□□ -2.02
TM4SF1-202ENST00000472441 KRTAP10-6P60371 365 aaPredicted RBP2.4□□□□□ -2.03
TM4SF1-202ENST00000472441 KRTAP4-1Q9BYQ7 146 aa2.4□□□□□ -2.03
TM4SF1-202ENST00000472441 CSAG1Q6PB30 78 aa2.39□□□□□ -2.03
TM4SF1-202ENST00000472441 ADM2Q7Z4H4 148 aa2.39□□□□□ -2.03
TM4SF1-202ENST00000472441 USH2AO75445 5202 aa2.39□□□□□ -2.03
TM4SF1-202ENST00000472441 A0A0D9SG42 100 aa2.39□□□□□ -2.03
TM4SF1-202ENST00000472441 P0C880 135 aa2.39□□□□□ -2.03
TM4SF1-202ENST00000472441 KRTAP13-4Q3LI77 160 aa2.37□□□□□ -2.03
TM4SF1-202ENST00000472441 CRIPTQ9P021 101 aa2.35□□□□□ -2.03
TM4SF1-202ENST00000472441 K7ERS5 55 aa2.35□□□□□ -2.03
TM4SF1-202ENST00000472441 LCE4AQ5TA78 99 aa2.31□□□□□ -2.04
TM4SF1-202ENST00000472441 SPINT4Q6UDR6 99 aa2.31□□□□□ -2.04
TM4SF1-202ENST00000472441 M0QZ58 72 aa2.3□□□□□ -2.04
TM4SF1-202ENST00000472441 KRTAP19-2Q3LHN2 52 aa2.3□□□□□ -2.04
TM4SF1-202ENST00000472441 R4GN34 69 aa2.3□□□□□ -2.04
TM4SF1-202ENST00000472441 KRTAP12-2P59991 146 aa2.29□□□□□ -2.04
TM4SF1-202ENST00000472441 M0R2T5 61 aa2.28□□□□□ -2.04
TM4SF1-202ENST00000472441 FLGP20930 4061 aaPredicted RBP2.27□□□□□ -2.05
TM4SF1-202ENST00000472441 KRTAP12-1P59990 96 aa2.27□□□□□ -2.05
TM4SF1-202ENST00000472441 ROMO1P60602 79 aa2.26□□□□□ -2.05
TM4SF1-202ENST00000472441 KMT2DO14686 5537 aa2.25□□□□□ -2.05
TM4SF1-202ENST00000472441 KRTAP25-1Q3LHN0 102 aa2.23□□□□□ -2.05
TM4SF1-202ENST00000472441 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
TM4SF1-202ENST00000472441 KRTAP9-7A8MTY7 169 aa2.22□□□□□ -2.05
TM4SF1-202ENST00000472441 NDUFAF8A1L188 74 aa2.21□□□□□ -2.06
TM4SF1-202ENST00000472441 C10orf95Q9H7T3 257 aa2.21□□□□□ -2.06
TM4SF1-202ENST00000472441 LUZP6Q538Z0 58 aa2.2□□□□□ -2.06
TM4SF1-202ENST00000472441 MT1HP80294 61 aa2.18□□□□□ -2.06
TM4SF1-202ENST00000472441 CAMK2N1Q7Z7J9 78 aa2.18□□□□□ -2.06
TM4SF1-202ENST00000472441 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
TM4SF1-202ENST00000472441 LCE5AQ5TCM9 118 aa2.17□□□□□ -2.06
TM4SF1-202ENST00000472441 KRTAP10-10P60014 251 aa2.15□□□□□ -2.07
TM4SF1-202ENST00000472441 KRTAP19-4Q3LI73 84 aa2.13□□□□□ -2.07
TM4SF1-202ENST00000472441 MT2AP02795 61 aa2.12□□□□□ -2.07
TM4SF1-202ENST00000472441 MT1FP04733 61 aa2.12□□□□□ -2.07
TM4SF1-202ENST00000472441 PLAC4Q8WY50 150 aa2.11□□□□□ -2.07
TM4SF1-202ENST00000472441 KRTAP5-9P26371 169 aa2.1□□□□□ -2.07
TM4SF1-202ENST00000472441 SPRR2GQ9BYE4 73 aa2.1□□□□□ -2.07
TM4SF1-202ENST00000472441 KRTAP9-3Q9BYQ3 159 aa2.08□□□□□ -2.08
TM4SF1-202ENST00000472441 DSTQ03001 7570 aaKnown RBP2.07□□□□□ -2.08
TM4SF1-202ENST00000472441 SSPOA2VEC9 5147 aa2.07□□□□□ -2.08
TM4SF1-202ENST00000472441 TNP1P09430 55 aa2.06□□□□□ -2.08
TM4SF1-202ENST00000472441 SYNE2Q8WXH0 6885 aaKnown RBP2.02□□□□□ -2.09
TM4SF1-202ENST00000472441 KRTAP19-8Q3LI54 63 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms