RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 CCDC179H3BU77 68 aa8.21□□□□□ -1.1
CCM2-205ENST00000472223 CSAG1Q6PB30 78 aa8.19□□□□□ -1.1
CCM2-205ENST00000472223 LCA10Q71F78 164 aa8.18□□□□□ -1.1
CCM2-205ENST00000472223 H7BZZ5 65 aa8.16□□□□□ -1.1
CCM2-205ENST00000472223 CHKB-CPT1BH3BT56 60 aa8.13□□□□□ -1.11
CCM2-205ENST00000472223 KRTAP10-6P60371 365 aaPredicted RBP8.13□□□□□ -1.11
CCM2-205ENST00000472223 CYSTM1Q9H1C7 97 aa8.11□□□□□ -1.11
CCM2-205ENST00000472223 SPTSSBQ8NFR3 76 aa8.1□□□□□ -1.11
CCM2-205ENST00000472223 LORP23490 312 aaPredicted RBP8.07□□□□□ -1.12
CCM2-205ENST00000472223 ATP5EP56381 51 aaPredicted RBP8.04□□□□□ -1.12
CCM2-205ENST00000472223 TMEM258P61165 79 aa8□□□□□ -1.13
CCM2-205ENST00000472223 PCP4P48539 62 aa7.99□□□□□ -1.13
CCM2-205ENST00000472223 COA5Q86WW8 74 aa7.98□□□□□ -1.13
CCM2-205ENST00000472223 KRTAP9-8Q9BYQ0 159 aa7.96□□□□□ -1.14
CCM2-205ENST00000472223 KRTAP10-10P60014 251 aa7.95□□□□□ -1.14
CCM2-205ENST00000472223 MT2AP02795 61 aa7.92□□□□□ -1.14
CCM2-205ENST00000472223 H0YAA0 97 aa7.89□□□□□ -1.15
CCM2-205ENST00000472223 MT1FP04733 61 aa7.85□□□□□ -1.15
CCM2-205ENST00000472223 ADM2Q7Z4H4 148 aa7.85□□□□□ -1.15
CCM2-205ENST00000472223 SEC61GP60059 68 aa7.79□□□□□ -1.16
CCM2-205ENST00000472223 CRIPTQ9P021 101 aa7.77□□□□□ -1.17
CCM2-205ENST00000472223 SERP1Q9Y6X1 66 aa7.75□□□□□ -1.17
CCM2-205ENST00000472223 KRTAP9-3Q9BYQ3 159 aa7.69□□□□□ -1.18
CCM2-205ENST00000472223 P0C880 135 aa7.66□□□□□ -1.18
CCM2-205ENST00000472223 KRTAP9-2Q9BYQ4 174 aa7.66□□□□□ -1.18
CCM2-205ENST00000472223 R4GN34 69 aa7.66□□□□□ -1.18
CCM2-205ENST00000472223 A0A1B0GU69 56 aa7.63□□□□□ -1.19
CCM2-205ENST00000472223 PRR15LQ9BU68 103 aa7.62□□□□□ -1.19
CCM2-205ENST00000472223 M0QZ58 72 aa7.59□□□□□ -1.19
CCM2-205ENST00000472223 SPRR2GQ9BYE4 73 aa7.59□□□□□ -1.19
CCM2-205ENST00000472223 KRTAP19-1Q8IUB9 90 aa7.55□□□□□ -1.2
CCM2-205ENST00000472223 LINC01558Q9Y6Z2 57 aa7.54□□□□□ -1.2
CCM2-205ENST00000472223 V9GYY9 64 aa7.54□□□□□ -1.2
CCM2-205ENST00000472223 LCE2BO14633 110 aa7.53□□□□□ -1.2
CCM2-205ENST00000472223 RPS28P62857 69 aaKnown RBP7.53□□□□□ -1.2
CCM2-205ENST00000472223 A0A1B0GU33 70 aa7.51□□□□□ -1.21
CCM2-205ENST00000472223 SMIM26A0A096LP01 95 aa7.5□□□□□ -1.21
CCM2-205ENST00000472223 Q5VV11 94 aa7.49□□□□□ -1.21
CCM2-205ENST00000472223 LINC01554Q52M75 96 aa7.47□□□□□ -1.21
CCM2-205ENST00000472223 KRTAP19-8Q3LI54 63 aa7.43□□□□□ -1.22
CCM2-205ENST00000472223 FSIP2Q5CZC0 6907 aa7.43□□□□□ -1.22
CCM2-205ENST00000472223 Q1T7F1 81 aa7.42□□□□□ -1.22
CCM2-205ENST00000472223 PLAC4Q8WY50 150 aa7.4□□□□□ -1.22
CCM2-205ENST00000472223 USH2AO75445 5202 aa7.4□□□□□ -1.23
CCM2-205ENST00000472223 CRCT1Q9UGL9 99 aa7.35□□□□□ -1.23
CCM2-205ENST00000472223 SPATA8Q6RVD6 105 aa7.34□□□□□ -1.23
CCM2-205ENST00000472223 KRTAP13-4Q3LI77 160 aa7.33□□□□□ -1.24
CCM2-205ENST00000472223 UQCR11O14957 56 aa7.32□□□□□ -1.24
CCM2-205ENST00000472223 PSPHP1O15172 72 aa7.32□□□□□ -1.24
CCM2-205ENST00000472223 MT1BP07438 61 aa7.32□□□□□ -1.24
CCM2-205ENST00000472223 A0A0D9SG42 100 aa7.29□□□□□ -1.24
CCM2-205ENST00000472223 A6NN06 94 aa7.29□□□□□ -1.24
CCM2-205ENST00000472223 KRTAP9-6A0A140TA67 174 aa7.24□□□□□ -1.25
CCM2-205ENST00000472223 KRTAP19-6Q3LI70 58 aa7.22□□□□□ -1.25
CCM2-205ENST00000472223 SSPOA2VEC9 5147 aa7.2□□□□□ -1.26
CCM2-205ENST00000472223 MIR22HGQ0VDD5 57 aa7.19□□□□□ -1.26
CCM2-205ENST00000472223 SPINT4Q6UDR6 99 aa7.19□□□□□ -1.26
CCM2-205ENST00000472223 PRO2289Q9P1D8 64 aa7.18□□□□□ -1.26
CCM2-205ENST00000472223 A6NED7 52 aa7.16□□□□□ -1.26
CCM2-205ENST00000472223 A8MU10 97 aa7.15□□□□□ -1.26
CCM2-205ENST00000472223 CAMK2N1Q7Z7J9 78 aa7.15□□□□□ -1.26
CCM2-205ENST00000472223 KRTAP10-5P60370 271 aa7.1□□□□□ -1.27
CCM2-205ENST00000472223 KRTAP12-1P59990 96 aa7.08□□□□□ -1.28
CCM2-205ENST00000472223 K7ERS5 55 aa7.07□□□□□ -1.28
CCM2-205ENST00000472223 KRTAP12-2P59991 146 aa7.04□□□□□ -1.28
CCM2-205ENST00000472223 FCGBPQ9Y6R7 5405 aaPredicted RBP7.01□□□□□ -1.29
CCM2-205ENST00000472223 MT1XP80297 61 aa7□□□□□ -1.29
CCM2-205ENST00000472223 CDC42SE1Q9NRR8 79 aa6.92□□□□□ -1.3
CCM2-205ENST00000472223 MACF1Q9UPN3 7388 aaKnown RBP6.78□□□□□ -1.32
CCM2-205ENST00000472223 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.78□□□□□ -1.32
CCM2-205ENST00000472223 BRK1Q8WUW1 75 aa6.75□□□□□ -1.33
CCM2-205ENST00000472223 TNP1P09430 55 aa6.72□□□□□ -1.33
CCM2-205ENST00000472223 C10orf95Q9H7T3 257 aa6.71□□□□□ -1.34
CCM2-205ENST00000472223 KRTAP10-7P60409 375 aaPredicted RBP6.7□□□□□ -1.34
CCM2-205ENST00000472223 KRTAP10-12P60413 245 aa6.68□□□□□ -1.34
CCM2-205ENST00000472223 SYNE2Q8WXH0 6885 aaKnown RBP6.66□□□□□ -1.34
CCM2-205ENST00000472223 KRTAP8-1Q8IUC2 63 aa6.59□□□□□ -1.35
CCM2-205ENST00000472223 ROMO1P60602 79 aa6.58□□□□□ -1.36
CCM2-205ENST00000472223 KRTAP25-1Q3LHN0 102 aa6.58□□□□□ -1.36
CCM2-205ENST00000472223 KRTAP9-7A8MTY7 169 aa6.57□□□□□ -1.36
CCM2-205ENST00000472223 KRTAP6-3Q3LI67 103 aa6.54□□□□□ -1.36
CCM2-205ENST00000472223 KRTAP4-8A0A0G2JLE6 195 aa6.53□□□□□ -1.36
CCM2-205ENST00000472223 KRTAP4-8Q9BYQ9 185 aa6.53□□□□□ -1.36
CCM2-205ENST00000472223 KMT2DO14686 5537 aa6.52□□□□□ -1.37
CCM2-205ENST00000472223 SPRR2FQ96RM1 72 aa6.42□□□□□ -1.38
CCM2-205ENST00000472223 KRTAP5-9P26371 169 aa6.41□□□□□ -1.38
CCM2-205ENST00000472223 PMAIP1Q13794 54 aa6.4□□□□□ -1.38
CCM2-205ENST00000472223 LCE3AQ5TA76 89 aa6.39□□□□□ -1.39
CCM2-205ENST00000472223 PRO0628Q9UI54 55 aa6.37□□□□□ -1.39
CCM2-205ENST00000472223 KRTAP23-1A1A580 65 aa6.35□□□□□ -1.39
CCM2-205ENST00000472223 PP632Q6XCG6 107 aa6.29□□□□□ -1.4
CCM2-205ENST00000472223 KRTAP19-5Q3LI72 72 aa6.27□□□□□ -1.41
CCM2-205ENST00000472223 KRTAP19-7Q3SYF9 63 aa6.24□□□□□ -1.41
CCM2-205ENST00000472223 MUC12Q9UKN1 5478 aa6.22□□□□□ -1.41
CCM2-205ENST00000472223 SPRR2EP22531 72 aa6.21□□□□□ -1.42
CCM2-205ENST00000472223 SPRR2BP35325 72 aa6.21□□□□□ -1.42
CCM2-205ENST00000472223 SPRR2AP35326 72 aa6.21□□□□□ -1.42
CCM2-205ENST00000472223 MT1EP04732 61 aa6.19□□□□□ -1.42
CCM2-205ENST00000472223 KRTAP12-3P60328 96 aa6.19□□□□□ -1.42
CCM2-205ENST00000472223 NEBP20929 6669 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms